RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 ANK3Q12955 4377 aaKnown RBP6.29□□□□□ -1.4
CDH11-216ENST00000569128 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDH11-216ENST00000569128 IGHV3-72A0A0B4J1Y9 119 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 IGHV1-69DA0A0B4J2H0 117 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 A0A1B0GVG6 124 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 J3QLI3 93 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 GPR31O00270 319 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 RAB29O14966 203 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 NPFFO15130 113 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 ATP6V0E1O15342 81 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 SAP30O75446 220 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 DFFBO76075 338 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 IGHV1-69P01742 117 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 CT45A6P0DMU7 189 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 CT45A5P0DMU8 189 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 CT45A7P0DMV0 189 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 CD99P14209 185 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 SAA4P35542 130 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 RAB7AP51149 207 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 PIGPP57054 158 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 SUPT4H1P63272 117 aaKnown RBP6.28□□□□□ -1.4
CDH11-216ENST00000569128 PJVKQ0ZLH3 352 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 SLC9A3R2Q15599 337 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 OR2B11Q5JQS5 317 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 TPTE2P1Q5T6R2 138 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 SPNS3Q6ZMD2 512 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 ZNF833PQ6ZTB9 187 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 SLC25A42Q86VD7 318 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 SLC38A6Q8IZM9 456 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 C8orf31Q8N9H6 132 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 ZNF383Q8NA42 475 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 OR51H1Q8NH63 302 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 ZFAND1Q8TCF1 268 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 C22orf15Q8WYQ4 148 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 MARVELD1Q9BSK0 173 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 SLC2A9Q9NRM0 540 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 DPM3Q9P2X0 92 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 GAB2Q9UQC2 676 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 C14orf166Q9Y224 244 aaKnown RBP6.28□□□□□ -1.4
CDH11-216ENST00000569128 CHTOPQ9Y3Y2 248 aaKnown RBP6.28□□□□□ -1.4
CDH11-216ENST00000569128 ZANQ9Y493 2812 aa6.28□□□□□ -1.4
CDH11-216ENST00000569128 CSPG4Q6UVK1 2322 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 ACANP16112 2415 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 MDFIC2A0A1B0GVS7 189 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 CRYM-AS1A6NIL9 109 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 CDK2AP2O75956 126 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 CD24P25063 80 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 HTR1DP28221 377 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 RAB13P51153 203 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 ZNF137PP52743 207 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 UBE2MP61081 183 aaKnown RBP6.27□□□□□ -1.41
CDH11-216ENST00000569128 RND3P61587 244 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 DHODHQ02127 395 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 PPP1R1AQ13522 171 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 SURF2Q15527 256 aaPredicted RBP6.27□□□□□ -1.41
CDH11-216ENST00000569128 SSX2Q16385 188 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 LINC01620Q4KN68 170 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 ABCA11PQ4W5N1 156 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 FAM120AOSQ5T036 256 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 GPR157Q5UAW9 335 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 LPCAT3Q6P1A2 487 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 TCTEX1D2Q8WW35 142 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 RTN4IP1Q8WWV3 396 aaPredicted RBP6.27□□□□□ -1.41
CDH11-216ENST00000569128 AKR1E2Q96JD6 320 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 SCGB3A2Q96PL1 93 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 TP53RKQ96S44 253 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 NABP2Q9BQ15 211 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 NAA60Q9H7X0 242 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 PIPOXQ9P0Z9 390 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 COPZ2Q9P299 210 aa6.27□□□□□ -1.41
CDH11-216ENST00000569128 FLNAP21333 2647 aaKnown RBP6.27□□□□□ -1.41
CDH11-216ENST00000569128 OTOGQ6ZRI0 2925 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 TEX15Q9BXT5 2789 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 IGHV1-3A0A0C4DH29 117 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 C9orf170A2RU37 121 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 LEUTXA8MZ59 168 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 RAMP3O60896 148 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 SFT2D2O95562 160 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 IGKV1-39P01597 117 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 GAPDHP04406 335 aaKnown RBP6.26□□□□□ -1.41
CDH11-216ENST00000569128 IGKV1D-39P04432 117 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 OR5AC1P0C628 307 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 OR4E1P0C645 316 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 IL3RAP26951 378 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 ZNF816Q0VGE8 651 aaPredicted RBP6.26□□□□□ -1.41
CDH11-216ENST00000569128 SRSF9Q13242 221 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDH11-216ENST00000569128 ZNF585BQ52M93 769 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 MOB3BQ86TA1 216 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 TGIF2LXQ8IUE1 241 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.26□□□□□ -1.41
CDH11-216ENST00000569128 LHFPL5Q8TAF8 219 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 CASTOR1Q8WTX7 329 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 RPEQ96AT9 228 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 ZNF486Q96H40 463 aaPredicted RBP6.26□□□□□ -1.41
CDH11-216ENST00000569128 AMMECR1Q9Y4X0 333 aaPredicted RBP6.26□□□□□ -1.41
CDH11-216ENST00000569128 ALG5Q9Y673 324 aa6.26□□□□□ -1.41
CDH11-216ENST00000569128 SETXQ7Z333 2677 aaKnown RBP6.26□□□□□ -1.41
CDH11-216ENST00000569128 SVEP1Q4LDE5 3571 aa6.25□□□□□ -1.41
CDH11-216ENST00000569128 CELSR1Q9NYQ6 3014 aa6.25□□□□□ -1.41
CDH11-216ENST00000569128 IGLV5-45A0A087WSX0 123 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms