RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ZFP1Q6P2D0 407 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 C10orf67Q8IYJ2 551 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 ZBTB34Q8NCN2 500 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 CSNK1G2-AS1Q8NCQ2 148 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 OR1L8Q8NGR8 309 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 FRZBQ92765 325 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 LSM10Q969L4 123 aaKnown RBP6.19□□□□□ -1.42
SMG1-216ENST00000569122 NEU1Q99519 415 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 NXF2Q9GZY0 626 aaKnown RBP6.19□□□□□ -1.42
SMG1-216ENST00000569122 KCNK15Q9H427 330 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 VSIRQ9H7M9 311 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 IGHV3-49A0A0A0MS15 119 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 METTL21EPA6NDL7 271 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 HOXA1P49639 335 aaPredicted RBP6.18□□□□□ -1.42
SMG1-216ENST00000569122 CATR1Q13166 79 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 MSMO1Q15800 293 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 POU2AF1Q16633 256 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 C2orf76Q3KRA6 126 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 ACTL10Q5JWF8 245 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 SPAG16Q8N0X2 631 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 DMBX1Q8NFW5 382 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 OR10R2Q8NGX6 335 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 FAM3DQ96BQ1 224 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 NARS2Q96I59 477 aaKnown RBP6.18□□□□□ -1.42
SMG1-216ENST00000569122 TMEM56Q96MV1 263 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 NIPSNAP3BQ9BS92 247 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 YTHDF1Q9BYJ9 559 aaKnown RBP6.18□□□□□ -1.42
SMG1-216ENST00000569122 CLEC5AQ9NY25 188 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 FKBP11Q9NYL4 201 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 TAS2R8Q9NYW2 309 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 KCNK7Q9Y2U2 307 aa6.18□□□□□ -1.42
SMG1-216ENST00000569122 PUS1Q9Y606 427 aaKnown RBP eCLIP6.18□□□□□ -1.42
SMG1-216ENST00000569122 IGHV3OR16-13A0A075B7E8 117 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 IGHV3-21A0A0B4J1V1 117 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 IGHV3-74A0A0B4J1X5 117 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 K7EIM0 57 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 GNG7O60262 68 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 ARL6IP5O75915 188 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 ATP5HO75947 161 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 IGLV2-14P01704 120 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 UCHL1P09936 223 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 BTF3P20290 206 aaKnown RBP6.17□□□□□ -1.42
SMG1-216ENST00000569122 C4BPBP20851 252 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 NFYAP23511 347 aaPredicted RBP6.17□□□□□ -1.42
SMG1-216ENST00000569122 NPPCP23582 126 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 GNRHRP30968 328 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 ERVK-16P61578 105 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 WT1-ASQ06250 92 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 CNIH2Q6PI25 160 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 CADM3Q8N126 398 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 OR10W1Q8NGF6 305 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 OR1P1Q8NH06 330 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 MAFIPQ8WZ33 124 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 ST8SIA2Q92186 375 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 SCRT1Q9BWW7 348 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 DCSTAMPQ9H295 470 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 RFNGQ9Y644 331 aa6.17□□□□□ -1.42
SMG1-216ENST00000569122 TEX50A0A1B0GTY4 177 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 J3QL48 77 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 K7EQG2 157 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 MFNGO00587 321 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 SCGB2A1O75556 95 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 SNAPC5O75971 98 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 HIST1H1DP16402 221 aaKnown RBP6.16□□□□□ -1.42
SMG1-216ENST00000569122 NPBWR1P48145 328 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 AP2S1P53680 142 aaPredicted RBP6.16□□□□□ -1.42
SMG1-216ENST00000569122 CCL18P55774 89 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 BRWD1-AS2P59051 145 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 EIF4EBP1Q13541 118 aaPredicted RBP6.16□□□□□ -1.42
SMG1-216ENST00000569122 INSL4Q14641 139 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 GSG1LQ6UXU4 331 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 TPRA1Q86W33 373 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 STXBP6Q8NFX7 210 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 PYDC1Q8WXC3 89 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 SLC25A46Q96AG3 418 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 C18orf15Q96N68 181 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 RAB40CQ96S21 281 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 HINT2Q9BX68 163 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 CCDC90BQ9GZT6 254 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 PLEKHA2Q9HB19 425 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 NDUFA4L2Q9NRX3 87 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 TMEM140Q9NV12 185 aa6.16□□□□□ -1.42
SMG1-216ENST00000569122 A0A075B6Q4 140 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 KNCNA6PVL3 124 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 ZNF688P0C7X2 276 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 HTN3P15516 51 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 RAB6AP20340 208 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 EMP1P54849 157 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 SNRPD3P62318 126 aaKnown RBP6.15□□□□□ -1.42
SMG1-216ENST00000569122 TRAM1Q15629 374 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 TTC32Q5I0X7 151 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 TMEM88Q6PEY1 159 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 TOMM20LQ6UXN7 152 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 ZNF600Q6ZNG1 722 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 LYPD1Q8N2G4 141 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 FAM24BQ8N5W8 94 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 NANOGP1Q8N7R0 232 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 BORCS5Q969J3 196 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 MOB3AQ96BX8 217 aa6.15□□□□□ -1.42
SMG1-216ENST00000569122 METTL26Q96S19 204 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms