RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 NEURL2Q9BR09 285 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 CHRDL1Q9BU40 450 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 ZMAT4Q9H898 229 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 THYN1Q9P016 225 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 CCDC59Q9P031 241 aaKnown RBP5.87□□□□□ -1.47
CDH3-209ENST00000569080 SELENOKQ9Y6D0 94 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 EPPK1P58107 5090 aaKnown RBP5.87□□□□□ -1.47
CDH3-209ENST00000569080 IGHV3-35A0A0C4DH35 117 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 A0A0G2JRQ6 117 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 RBMY1BA6NDE4 496 aaKnown RBP5.86□□□□□ -1.47
CDH3-209ENST00000569080 RBMY1EA6NEQ0 496 aaKnown RBP5.86□□□□□ -1.47
CDH3-209ENST00000569080 OR2T8A6NH00 312 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 GABARAPH6UMI1 98 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 I3L2K1 104 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 SNAPC5O75971 98 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 RBMY1DP0C7P1 496 aaKnown RBP5.86□□□□□ -1.47
CDH3-209ENST00000569080 PPP5CP53041 499 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 ELLP55199 621 aaPredicted RBP5.86□□□□□ -1.47
CDH3-209ENST00000569080 PIGPP57054 158 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 PRCDQ00LT1 54 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 IZUMO4Q1ZYL8 232 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 FAM106AQ4KMX7 169 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 CASC10Q5T4H9 136 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 FAAP20Q6NZ36 180 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 OR2C3Q8N628 320 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 DEFB125Q8N687 156 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 TMEM229BQ8NBD8 167 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 UXS1Q8NBZ7 420 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 OR13C8Q8NGS7 320 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 OR1P1Q8NH06 330 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 SCARB1Q8WTV0 552 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 RAB2BQ8WUD1 216 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 SMIM4Q8WVI0 70 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 BSCL2Q96G97 398 aaPredicted RBP5.86□□□□□ -1.47
CDH3-209ENST00000569080 SPATA25Q9BR10 227 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 HINT2Q9BX68 163 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 SLIRPQ9GZT3 109 aaKnown RBP5.86□□□□□ -1.47
CDH3-209ENST00000569080 HIPK2Q9H2X6 1198 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 RETNQ9HD89 108 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 C21orf62Q9NYP8 219 aa5.86□□□□□ -1.47
CDH3-209ENST00000569080 ALMS1Q8TCU4 4167 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 IGHV3-21A0A0B4J1V1 117 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 A0A0B4J293 547 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 ZNF320A2RRD8 509 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 INS-IGF2F8WCM5 200 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 PGAM2P15259 253 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 UCP1P25874 307 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 S100GP29377 79 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 FCGR2BP31994 310 aaPredicted RBP5.85□□□□□ -1.47
CDH3-209ENST00000569080 TAS2R19P59542 299 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 SSBP1Q04837 148 aaKnown RBP5.85□□□□□ -1.47
CDH3-209ENST00000569080 AARDQ4LEZ3 155 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 ZNF57Q68EA5 555 aaPredicted RBP5.85□□□□□ -1.47
CDH3-209ENST00000569080 PVRIGQ6DKI7 326 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 SLC25A24Q6NUK1 477 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 STEAP1BQ6NZ63 245 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 SPSB3Q6PJ21 355 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 PLET1Q6UQ28 207 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 H2BFWTQ7Z2G1 175 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 CLVS1Q8IUQ0 354 aaPredicted RBP5.85□□□□□ -1.47
CDH3-209ENST00000569080 MARC2Q969Z3 335 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 TMEM56Q96MV1 263 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 BCL7BQ9BQE9 202 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 SRD5A3Q9H8P0 318 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 SLC2A8Q9NY64 477 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 FKBP11Q9NYL4 201 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 CEPT1Q9Y6K0 416 aa5.85□□□□□ -1.47
CDH3-209ENST00000569080 C3orf85A0A1B0GTC6 90 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 OR11H12B2RN74 326 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 H3BMQ9 156 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 NDUFA4O00483 81 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 CTDSPLO15194 276 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 RGS5O15539 181 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 CYB5BO43169 146 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 ST8SIA3O43173 380 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 SCAF4O95104 1147 aaKnown RBP5.84□□□□□ -1.47
CDH3-209ENST00000569080 RAB3DO95716 219 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 IFNA6P05013 189 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 CTSDP07339 412 aaPredicted RBP5.84□□□□□ -1.47
CDH3-209ENST00000569080 CTSGP08311 255 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 TMBIM6P55061 237 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 HSPE1P61604 102 aaKnown RBP5.84□□□□□ -1.47
CDH3-209ENST00000569080 MRPS10P82664 201 aaKnown RBP5.84□□□□□ -1.47
CDH3-209ENST00000569080 GUCA2BQ16661 112 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 SP6Q3SY56 376 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 OR4C16Q8NGL9 310 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 OR1L6Q8NGR2 347 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 OR4A16Q8NH70 328 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 TERB2Q8NHR7 220 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 LHFPL5Q8TAF8 219 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 MARCH1Q8TCQ1 289 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 C15orf40Q8WUR7 153 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 OR10C1Q96KK4 312 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 SOSTQ9BQB4 213 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 RTBDNQ9BSG5 229 aaPredicted RBP5.84□□□□□ -1.47
CDH3-209ENST00000569080 C5orf66Q9H5L9 145 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 TUBA4BQ9H853 241 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 PALMDQ9NP74 551 aa5.84□□□□□ -1.47
CDH3-209ENST00000569080 DAZ1Q9NQZ3 744 aaKnown RBP5.84□□□□□ -1.47
CDH3-209ENST00000569080 MRPL27Q9P0M9 148 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms