RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 CTDSPLO15194 276 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 GSTZ1O43708 216 aaPredicted RBP7.21□□□□□ -1.26
SF3B3-211ENST00000568291 NXPH3O95157 252 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 DHFRP00374 187 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 IGLV1-51P01701 117 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 CTSDP07339 412 aaPredicted RBP7.21□□□□□ -1.26
SF3B3-211ENST00000568291 OR5AC1P0C628 307 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 ETV6P41212 452 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 AKR1C2P52895 323 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 RND3P61587 244 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 MRPS10P82664 201 aaKnown RBP7.21□□□□□ -1.26
SF3B3-211ENST00000568291 MEF2DQ14814 521 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 ZNF79Q15937 498 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 TM4SF20Q53R12 229 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 CASC10Q5T4H9 136 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 UNQ9165/PRO28630Q6UXU0 137 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 GDPD1Q8N9F7 314 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 UBAC2Q8NBM4 344 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 LHFPL5Q8TAF8 219 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 LSM10Q969L4 123 aaKnown RBP7.21□□□□□ -1.26
SF3B3-211ENST00000568291 EEF1AKMT3Q96AZ1 226 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 GPR132Q9UNW8 380 aa7.21□□□□□ -1.26
SF3B3-211ENST00000568291 C14orf166Q9Y224 244 aaKnown RBP7.21□□□□□ -1.26
SF3B3-211ENST00000568291 TENM2Q9NT68 2774 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 OR2T8A6NH00 312 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 ST8SIA3O43173 380 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 ZNF207O43670 478 aaKnown RBP7.2□□□□□ -1.26
SF3B3-211ENST00000568291 GGCTO75223 188 aaKnown RBP7.2□□□□□ -1.26
SF3B3-211ENST00000568291 P0C879 139 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 FOLR2P14207 255 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 HIST1H1BP16401 226 aaKnown RBP7.2□□□□□ -1.26
SF3B3-211ENST00000568291 AKR1C4P17516 323 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 PTBP1P26599 531 aaKnown RBP eCLIP7.2□□□□□ -1.26
SF3B3-211ENST00000568291 HSPE1P61604 102 aaKnown RBP7.2□□□□□ -1.26
SF3B3-211ENST00000568291 SSBP1Q04837 148 aaKnown RBP7.2□□□□□ -1.26
SF3B3-211ENST00000568291 TATDN3Q17R31 274 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 SBSPONQ8IVN8 264 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 Q8N1Y9 231 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 Q8N402 240 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 OR6Q1Q8NGQ2 317 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 ZNF502Q8TBZ5 544 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 SCARB1Q8WTV0 552 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 GLYATL2Q8WU03 294 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 TMEM230Q96A57 120 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 PINX1Q96BK5 328 aaKnown RBP7.2□□□□□ -1.26
SF3B3-211ENST00000568291 MISP3Q96FF7 219 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 ZNF486Q96H40 463 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-211ENST00000568291 CHRDL1Q9BU40 450 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 NAA60Q9H7X0 242 aa7.2□□□□□ -1.26
SF3B3-211ENST00000568291 F11RQ9Y624 299 aaKnown RBP7.2□□□□□ -1.26
SF3B3-211ENST00000568291 TNCP24821 2201 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 C2orf70A6NJV1 201 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 K7EIM0 57 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 IFNA17P01571 189 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 S100A5P33763 92 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 KLF9Q13886 244 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-211ENST00000568291 MLANAQ16655 118 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 KLK9Q2XQG4 91 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 CD300EQ496F6 205 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-211ENST00000568291 PLET1Q6UQ28 207 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 CCDC190Q86UF4 302 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 SELENOHQ8IZQ5 122 aaKnown RBP7.19□□□□□ -1.26
SF3B3-211ENST00000568291 OR2C3Q8N628 320 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 CCDC71LQ8N9Z2 235 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 OR5B3Q8NH48 314 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 RNASE11Q8TAA1 199 aaKnown RBP7.19□□□□□ -1.26
SF3B3-211ENST00000568291 TRIM63Q969Q1 353 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 GPR146Q96CH1 333 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 TMEM56Q96MV1 263 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 TSC22D3Q99576 134 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 TMEM222Q9H0R3 208 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 FKBP11Q9NYL4 201 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 KLK9Q9UKQ9 250 aa7.19□□□□□ -1.26
SF3B3-211ENST00000568291 DYNC2H1Q8NCM8 4307 aaKnown RBP7.19□□□□□ -1.26
SF3B3-211ENST00000568291 TRBV7-1A0A0A6YYK4 115 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 CRYM-AS1A6NIL9 109 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 ZNF785A8K8V0 405 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 F8W735 103 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-211ENST00000568291 CDS2O95674 445 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 FRMD6-AS1P0C7T7 363 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 LYL1P12980 280 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 CBLN1P23435 193 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 UCP1P25874 307 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 ADMP35318 185 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 PRCDQ00LT1 54 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 BAK1Q16611 211 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 GUCA2BQ16661 112 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 DEFB114Q30KQ6 69 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 Q56UQ5 140 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 TMEM268Q5VZI3 342 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 TMED4Q7Z7H5 227 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 GPHB5Q86YW7 130 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 TOMM5Q8N4H5 51 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 UXS1Q8NBZ7 420 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 RRNAD1Q96FB5 475 aaKnown RBP7.18□□□□□ -1.26
SF3B3-211ENST00000568291 WDR89Q96FK6 387 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-211ENST00000568291 CXorf58Q96LI9 332 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 PRRT1Q99946 306 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 SRSF8Q9BRL6 282 aaKnown RBP7.18□□□□□ -1.26
SF3B3-211ENST00000568291 WFDC10AQ9H1F0 79 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms