RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 HNF4GQ14541 408 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 RTL8BQ17RB0 113 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 TPTE2P1Q5T6R2 138 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 PXDC1Q5TGL8 231 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 HIST2H2BCQ6DN03 193 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 DHRS7BQ6IAN0 325 aaPredicted RBP4.58□□□□□ -1.68
SF3B3-210ENST00000567654 OR8G2PQ6IF36 304 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 Q6ZRG5 221 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 SSX7Q7RTT5 188 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 ZNF429Q86V71 674 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 STX12Q86Y82 276 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 PDPNQ86YL7 162 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 OR11H6Q8NGC7 330 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 OR10W1Q8NGF6 305 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 OR52E5Q8NH55 327 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 C10orf105Q8TEF2 133 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 RAB39BQ96DA2 213 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 PERPQ96FX8 193 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 LINC00052Q96N35 136 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 TSNAXQ99598 290 aaKnown RBP4.58□□□□□ -1.68
SF3B3-210ENST00000567654 RSG1Q9BU20 258 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 VSIRQ9H7M9 311 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 LPAR2Q9HBW0 351 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 BET1LQ9NYM9 111 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 CACFD1Q9UGQ2 172 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 ITGB1BP2Q9UKP3 347 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 WASHC3Q9Y3C0 194 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 OR51B2Q9Y5P1 312 aa4.58□□□□□ -1.68
SF3B3-210ENST00000567654 ABCA1O95477 2261 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 BAHCC1Q9P281 2608 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 BORCS7-ASMTA0A0B4J1R7 106 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 A0A1W2PPH5 198 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 ZNF705EA8MWA4 302 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-210ENST00000567654 I3L521 148 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 ENSAO43768 121 aaKnown RBP4.57□□□□□ -1.68
SF3B3-210ENST00000567654 SLC25A17O43808 307 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 HRASP01112 189 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 SEC11BP0C7V7 166 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 PLA2G2AP14555 144 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 COX6B1P14854 86 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 MDKP21741 143 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-210ENST00000567654 S100A1P23297 94 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 PRTN3P24158 256 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 CD24P25063 80 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 IL3RAP26951 378 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 HOXA1P49639 335 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-210ENST00000567654 ARHGDIBP52566 201 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 PRRX1P54821 245 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 HSPE1P61604 102 aaKnown RBP4.57□□□□□ -1.68
SF3B3-210ENST00000567654 PRCDQ00LT1 54 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 AKR1C1Q04828 323 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 ACSM6Q6P461 480 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 BTNL8Q6UX41 500 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 C19orf35Q6ZS72 473 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 MOB3BQ86TA1 216 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 OR2G3Q8NGZ4 309 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 OSR1Q8TAX0 266 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-210ENST00000567654 TMEM167AQ8TBQ9 72 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 LHX4Q969G2 390 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 FLYWCH2Q96CP2 140 aaKnown RBP4.57□□□□□ -1.68
SF3B3-210ENST00000567654 PCGF1Q9BSM1 259 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 SCRT1Q9BWW7 348 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 HINT2Q9BX68 163 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 WDR61Q9GZS3 305 aaKnown RBP4.57□□□□□ -1.68
SF3B3-210ENST00000567654 TMEM231Q9H6L2 316 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 ZNF430Q9H8G1 570 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-210ENST00000567654 NUP50Q9UKX7 468 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 STRAPQ9Y3F4 350 aaKnown RBP4.57□□□□□ -1.68
SF3B3-210ENST00000567654 CHD6Q8TD26 2715 aa4.57□□□□□ -1.68
SF3B3-210ENST00000567654 PRRC2AP48634 2157 aaKnown RBP4.56□□□□□ -1.68
SF3B3-210ENST00000567654 A0A1B0GV50 99 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 C9JQL5 133 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 TIMM23O14925 209 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 CA2P00918 260 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 IGKV1D-33P01593 117 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 IGKV1-33P01594 117 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 RNASE2P10153 161 aaKnown RBP4.56□□□□□ -1.68
SF3B3-210ENST00000567654 DEFA4P12838 97 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 ADCYAP1P18509 176 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 DVL1P1P54792 670 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-210ENST00000567654 F2RL1P55085 397 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 ATP5J2P56134 94 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 EIF5AP63241 154 aaKnown RBP4.56□□□□□ -1.68
SF3B3-210ENST00000567654 BLOC1S1P78537 153 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 CCL20P78556 96 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 ZNF266Q14584 549 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 PSG5Q15238 335 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 ZNF726P1Q15940 193 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 VWC2Q2TAL6 325 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 LRRC75BQ2VPJ9 315 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 RUSC1-AS1Q66K80 236 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 SPSB3Q6PJ21 355 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 HSD17B13Q7Z5P4 300 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-210ENST00000567654 KIR3DL3Q8N743 410 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 OR4C13Q8NGP0 309 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 LYPD6BQ8NI32 183 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 TAF15Q92804 592 aaKnown RBP eCLIP4.56□□□□□ -1.68
SF3B3-210ENST00000567654 RPEQ96AT9 228 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 PIMREGQ9BSJ6 248 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 HRH4Q9H3N8 390 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms