RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 ATP5IP56385 69 aaPredicted RBP9.38□□□□□ -0.91
BBS4-213ENST00000567279 RAB2AP61019 212 aa9.38□□□□□ -0.91
BBS4-213ENST00000567279 TREML4Q6UXN2 200 aa9.38□□□□□ -0.91
BBS4-213ENST00000567279 MRPL41Q8IXM3 137 aaKnown RBP9.38□□□□□ -0.91
BBS4-213ENST00000567279 FBN2P35556 2912 aa9.38□□□□□ -0.91
BBS4-213ENST00000567279 ASH1LQ9NR48 2969 aaKnown RBP9.38□□□□□ -0.91
BBS4-213ENST00000567279 NAV3Q8IVL0 2385 aa9.38□□□□□ -0.91
BBS4-213ENST00000567279 IGHV3OR16-10A0A075B7F0 116 aa9.38□□□□□ -0.91
BBS4-213ENST00000567279 CENPVL3A0A0U1RRI6 287 aa9.38□□□□□ -0.91
BBS4-213ENST00000567279 MSMBP08118 114 aa9.38□□□□□ -0.91
BBS4-213ENST00000567279 APELAP0DMC3 54 aa9.38□□□□□ -0.91
BBS4-213ENST00000567279 CENPVQ7Z7K6 275 aaPredicted RBP9.38□□□□□ -0.91
BBS4-213ENST00000567279 COMMD1Q8N668 190 aa9.38□□□□□ -0.91
BBS4-213ENST00000567279 MALSU1Q96EH3 234 aa9.38□□□□□ -0.91
BBS4-213ENST00000567279 NPVFQ9HCQ7 196 aa9.38□□□□□ -0.91
BBS4-213ENST00000567279 PLXNB1O43157 2135 aa9.37□□□□□ -0.91
BBS4-213ENST00000567279 TRAV40A0A0B4J280 105 aa9.37□□□□□ -0.91
BBS4-213ENST00000567279 IGLC7A0M8Q6 106 aa9.37□□□□□ -0.91
BBS4-213ENST00000567279 FCN1O00602 326 aa9.37□□□□□ -0.91
BBS4-213ENST00000567279 MPDU1O75352 247 aa9.37□□□□□ -0.91
BBS4-213ENST00000567279 NDUFA3O95167 84 aa9.37□□□□□ -0.91
BBS4-213ENST00000567279 TMEM11P17152 192 aa9.37□□□□□ -0.91
BBS4-213ENST00000567279 SUB1P53999 127 aaKnown RBP eCLIP9.37□□□□□ -0.91
BBS4-213ENST00000567279 RUSC1-AS1Q66K80 236 aa9.37□□□□□ -0.91
BBS4-213ENST00000567279 SPSB3Q6PJ21 355 aa9.37□□□□□ -0.91
BBS4-213ENST00000567279 LFNGQ8NES3 379 aa9.37□□□□□ -0.91
BBS4-213ENST00000567279 NPBQ8NG41 125 aa9.37□□□□□ -0.91
BBS4-213ENST00000567279 SFT2D1Q8WV19 159 aa9.37□□□□□ -0.91
BBS4-213ENST00000567279 SRSF12Q8WXF0 261 aaKnown RBP9.37□□□□□ -0.91
BBS4-213ENST00000567279 RCC1LQ96I51 464 aaKnown RBP9.37□□□□□ -0.91
BBS4-213ENST00000567279 AJUBAQ96IF1 538 aa9.37□□□□□ -0.91
BBS4-213ENST00000567279 P2RX4Q99571 388 aa9.37□□□□□ -0.91
BBS4-213ENST00000567279 MGST2Q99735 147 aa9.37□□□□□ -0.91
BBS4-213ENST00000567279 HBE1P02100 147 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 AREGP15514 252 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 SSBP2P81877 361 aaPredicted RBP9.36□□□□□ -0.91
BBS4-213ENST00000567279 CENPEQ02224 2701 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 ZNF726P1Q15940 193 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 SSX7Q7RTT5 188 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 ABHD5Q8WTS1 349 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 GGTLC1Q9BX51 225 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 BEX4Q9NWD9 120 aaPredicted RBP9.36□□□□□ -0.91
BBS4-213ENST00000567279 BTBD17A6NE02 478 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 NCBP2LA6PVI3 153 aaKnown RBP9.36□□□□□ -0.91
BBS4-213ENST00000567279 B4DSR2 109 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 TEX22C9J3V5 150 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 FNDC10F2Z333 226 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 EIF3GO75821 320 aaKnown RBP eCLIP9.36□□□□□ -0.91
BBS4-213ENST00000567279 CNIH1O95406 144 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 MBP02144 154 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 CCL20P78556 96 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 CD69Q07108 199 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 GUK1Q16774 197 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 C5orf64Q2M2E5 130 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 DEFB113Q30KQ7 82 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 FAM120AOSQ5T036 256 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 FAM122CQ6P4D5 195 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 TEPPQ6URK8 271 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 LCN15Q6UWW0 184 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 C19orf35Q6ZS72 473 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 SLC16A13Q7RTY0 426 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 PIP4P2Q8N4L2 257 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 Q8N6K4 173 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 OR10G4Q8NGN3 311 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 OR10G9Q8NGN4 311 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 OR10G7Q8NGN6 311 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 SSMEM1Q8WWF3 244 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 SLC35E1Q96K37 410 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 SLC25A22Q9H936 323 aa9.36□□□□□ -0.91
BBS4-213ENST00000567279 VPS13CQ709C8 3753 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 POLQO75417 2590 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 IGHV1-69DA0A0B4J2H0 117 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 TMEM218A2RU14 115 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 MAP1LC3B2A6NCE7 125 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 IGHV1-69P01742 117 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 BRS3P32247 399 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 OPRK1P41145 380 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 FGF8P55075 233 aaPredicted RBP9.35□□□□□ -0.91
BBS4-213ENST00000567279 EBI3Q14213 229 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 ACOT6Q3I5F7 207 aaPredicted RBP9.35□□□□□ -0.91
BBS4-213ENST00000567279 MIC13Q5XKP0 118 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 CCDC28AQ8IWP9 274 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 RNASEH2CQ8TDP1 164 aaKnown RBP9.35□□□□□ -0.91
BBS4-213ENST00000567279 C1orf159Q96HA4 380 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 PBDC1Q9BVG4 233 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 MAP1LC3BQ9GZQ8 125 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 EIF5A2Q9GZV4 153 aaKnown RBP9.35□□□□□ -0.91
BBS4-213ENST00000567279 KCNIP2Q9NS61 270 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 LSM4Q9Y4Z0 139 aaKnown RBP9.35□□□□□ -0.91
BBS4-213ENST00000567279 PXMP4Q9Y6I8 212 aa9.35□□□□□ -0.91
BBS4-213ENST00000567279 FAM106CPP0CH98 169 aa9.34□□□□□ -0.91
BBS4-213ENST00000567279 M6PRP20645 277 aa9.34□□□□□ -0.91
BBS4-213ENST00000567279 RAB31Q13636 194 aa9.34□□□□□ -0.91
BBS4-213ENST00000567279 GAMTQ14353 236 aa9.34□□□□□ -0.91
BBS4-213ENST00000567279 MLANAQ16655 118 aa9.34□□□□□ -0.91
BBS4-213ENST00000567279 HIST2H2BCQ6DN03 193 aa9.34□□□□□ -0.91
BBS4-213ENST00000567279 BRD3OSQ6XYD6 125 aa9.34□□□□□ -0.91
BBS4-213ENST00000567279 RPP25LQ8N5L8 163 aaKnown RBP9.34□□□□□ -0.91
BBS4-213ENST00000567279 ZNF114Q8NC26 417 aa9.34□□□□□ -0.91
BBS4-213ENST00000567279 MISP3Q96FF7 219 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms