RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 SYNGR2O43760 224 aa10.53□□□□□ -0.72
CLK3-218ENST00000566926 KBTBD11O94819 623 aa10.53□□□□□ -0.72
CLK3-218ENST00000566926 IL6RP08887 468 aaPredicted RBP10.53□□□□□ -0.72
CLK3-218ENST00000566926 SAA1P0DJI8 122 aaPredicted RBP10.53□□□□□ -0.72
CLK3-218ENST00000566926 CD33P20138 364 aa10.53□□□□□ -0.72
CLK3-218ENST00000566926 SPCS3P61009 180 aa10.53□□□□□ -0.72
CLK3-218ENST00000566926 TMEM267Q0VDI3 215 aaPredicted RBP10.53□□□□□ -0.72
CLK3-218ENST00000566926 Q6ZRM9 215 aa10.53□□□□□ -0.72
CLK3-218ENST00000566926 SSX9Q7RTT3 188 aa10.53□□□□□ -0.72
CLK3-218ENST00000566926 MRPL41Q8IXM3 137 aaKnown RBP10.53□□□□□ -0.72
CLK3-218ENST00000566926 C9orf62Q8N4C0 152 aa10.53□□□□□ -0.72
CLK3-218ENST00000566926 OR5B3Q8NH48 314 aa10.53□□□□□ -0.72
CLK3-218ENST00000566926 AQP10Q96PS8 301 aa10.53□□□□□ -0.72
CLK3-218ENST00000566926 RNF126Q9BV68 326 aa10.53□□□□□ -0.72
CLK3-218ENST00000566926 MFFQ9GZY8 342 aa10.53□□□□□ -0.72
CLK3-218ENST00000566926 SLC25A31Q9H0C2 315 aa10.53□□□□□ -0.72
CLK3-218ENST00000566926 FBXL15Q9H469 300 aa10.53□□□□□ -0.72
CLK3-218ENST00000566926 TMEM14BQ9NUH8 114 aa10.53□□□□□ -0.72
CLK3-218ENST00000566926 METTL1Q9UBP6 276 aaKnown RBP10.53□□□□□ -0.72
CLK3-218ENST00000566926 RCL1Q9Y2P8 373 aaKnown RBP10.53□□□□□ -0.72
CLK3-218ENST00000566926 LSM5Q9Y4Y9 91 aaKnown RBP10.53□□□□□ -0.72
CLK3-218ENST00000566926 TNCP24821 2201 aa10.52□□□□□ -0.73
CLK3-218ENST00000566926 NUDT19A8MXV4 375 aa10.52□□□□□ -0.73
CLK3-218ENST00000566926 UPK2O00526 184 aa10.52□□□□□ -0.73
CLK3-218ENST00000566926 IGHG4P01861 327 aa10.52□□□□□ -0.73
CLK3-218ENST00000566926 MAS1LP35410 378 aa10.52□□□□□ -0.73
CLK3-218ENST00000566926 RPP30P78346 268 aaKnown RBP10.52□□□□□ -0.73
CLK3-218ENST00000566926 DEFA6Q01524 100 aa10.52□□□□□ -0.73
CLK3-218ENST00000566926 PSG5Q15238 335 aa10.52□□□□□ -0.73
CLK3-218ENST00000566926 TMEM167AQ8TBQ9 72 aa10.52□□□□□ -0.73
CLK3-218ENST00000566926 RBMXL1Q96E39 390 aaKnown RBP10.52□□□□□ -0.73
CLK3-218ENST00000566926 PARP11Q9NR21 331 aa10.52□□□□□ -0.73
CLK3-218ENST00000566926 HSPB11Q9Y547 144 aa10.52□□□□□ -0.73
CLK3-218ENST00000566926 TRAV41A0A0B4J266 112 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 SRRM4A7MD48 611 aaKnown RBP10.51□□□□□ -0.73
CLK3-218ENST00000566926 H0YIZ8 118 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 ATP6V0E1O15342 81 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 SSSCA1O60232 199 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 TSC22D2O75157 780 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 IFNA17P01571 189 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 IGLV2-23P01705 113 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 CDX1P47902 265 aaPredicted RBP10.51□□□□□ -0.73
CLK3-218ENST00000566926 NKX2-5P52952 324 aaPredicted RBP10.51□□□□□ -0.73
CLK3-218ENST00000566926 ATP5IP56385 69 aaPredicted RBP10.51□□□□□ -0.73
CLK3-218ENST00000566926 HSPE1P61604 102 aaKnown RBP10.51□□□□□ -0.73
CLK3-218ENST00000566926 POLR2GP62487 172 aaKnown RBP eCLIP10.51□□□□□ -0.73
CLK3-218ENST00000566926 RPL8P62917 257 aaKnown RBP10.51□□□□□ -0.73
CLK3-218ENST00000566926 CX3CL1P78423 397 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 CFHR3Q02985 330 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 BAXQ07812 192 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 ZNF562Q6V9R5 426 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 MMD2Q8IY49 270 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 VKORC1L1Q8N0U8 176 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 OR2C3Q8N628 320 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 RNF152Q8N8N0 203 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 KLHL30-AS1Q8NEE0 82 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 WFDC9Q8NEX5 89 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 GRPEL2Q8TAA5 225 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 ABHD5Q8WTS1 349 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 SMIM8Q96KF7 97 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 COMMD5Q9GZQ3 224 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 LYRM2Q9NU23 88 aaPredicted RBP10.51□□□□□ -0.73
CLK3-218ENST00000566926 OR5AC2Q9NZP5 309 aa10.51□□□□□ -0.73
CLK3-218ENST00000566926 TAAR5O14804 337 aa10.5□□□□□ -0.73
CLK3-218ENST00000566926 ACTL6BO94805 426 aa10.5□□□□□ -0.73
CLK3-218ENST00000566926 OR9G9P0C7N8 305 aa10.5□□□□□ -0.73
CLK3-218ENST00000566926 PPIFP30405 207 aaKnown RBP10.5□□□□□ -0.73
CLK3-218ENST00000566926 S100A11P31949 105 aa10.5□□□□□ -0.73
CLK3-218ENST00000566926 MYCNOSP40205 109 aa10.5□□□□□ -0.73
CLK3-218ENST00000566926 CRIP2P52943 208 aaPredicted RBP10.5□□□□□ -0.73
CLK3-218ENST00000566926 IZUMO4Q1ZYL8 232 aa10.5□□□□□ -0.73
CLK3-218ENST00000566926 STX12Q86Y82 276 aa10.5□□□□□ -0.73
CLK3-218ENST00000566926 KCNRGQ8N5I3 272 aa10.5□□□□□ -0.73
CLK3-218ENST00000566926 DTD1Q8TEA8 209 aa10.5□□□□□ -0.73
CLK3-218ENST00000566926 HIPK2Q9H2X6 1198 aa10.5□□□□□ -0.73
CLK3-218ENST00000566926 C11orf1Q9H5F2 150 aa10.5□□□□□ -0.73
CLK3-218ENST00000566926 ENY2Q9NPA8 101 aa10.5□□□□□ -0.73
CLK3-218ENST00000566926 ZC4H2Q9NQZ6 224 aa10.5□□□□□ -0.73
CLK3-218ENST00000566926 OR51B2Q9Y5P1 312 aa10.5□□□□□ -0.73
CLK3-218ENST00000566926 KANTRA0A1W2PQU2 76 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 RNF222A6NCQ9 220 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 CEBPZOSA8MTT3 80 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 INS-IGF2F8WCM5 200 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 SLC25A17O43808 307 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 RPLP1P05386 114 aaKnown RBP10.49□□□□□ -0.73
CLK3-218ENST00000566926 PSMB8P28062 276 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 RPL12P30050 165 aaKnown RBP10.49□□□□□ -0.73
CLK3-218ENST00000566926 CAV2P51636 162 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 OR2B8PP59922 312 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 PRCDQ00LT1 54 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 LGALSLQ3ZCW2 172 aaPredicted RBP10.49□□□□□ -0.73
CLK3-218ENST00000566926 AKIRIN2Q53H80 203 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 SAMD5Q5TGI4 173 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 LAMTOR1Q6IAA8 161 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 HSD17B13Q7Z5P4 300 aaPredicted RBP10.49□□□□□ -0.73
CLK3-218ENST00000566926 PPP1R27Q86WC6 154 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 OR1L8Q8NGR8 309 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 RCC1LQ96I51 464 aaKnown RBP10.49□□□□□ -0.73
CLK3-218ENST00000566926 SRSF8Q9BRL6 282 aaKnown RBP10.49□□□□□ -0.73
CLK3-218ENST00000566926 QTRT1Q9BXR0 403 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms