RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 TRIP11Q15643 1979 aa2.21□□□□□ -2.05
HERPUD1-211ENST00000566550 TMEM269A0A1B0GVZ9 245 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 IGSF23A1L1A6 192 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 A8MUN3 132 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 I3L521 148 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 UBE2L6O14933 153 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 MED6O75586 246 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 IGHV1-46P01743 117 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 C1QBP02746 253 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 OR10J4P0C629 311 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 SCGB1A1P11684 91 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 ZNF32P17041 273 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 GZMHP20718 246 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 RAB13P51153 203 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 EMP1P54849 157 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 RPL30P62888 115 aaKnown RBP2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 HBA1P69905 142 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 NDPQ00604 133 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 CST6Q15828 149 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 CCDC58Q4VC31 144 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 TNFAIP8L3Q5GJ75 292 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 DOPEY1Q5JWR5 2465 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 C9orf64Q5T6V5 341 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 CDC42BPAQ5VT25 1732 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 PRSS54Q6PEW0 395 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 PPIP5K1Q6PFW1 1433 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 WDR59Q6PJI9 974 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 USP34Q70CQ2 3546 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 ADM2Q7Z4H4 148 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 OSR2Q8N2R0 312 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 RNF175Q8N4F7 328 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 GPR119Q8TDV5 335 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 RMI2Q96E14 147 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 PHYHIPLQ96FC7 376 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 EFCAB11Q9BUY7 163 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 C1orf50Q9BV19 199 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 WDR61Q9GZS3 305 aaKnown RBP2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 LHX9Q9NQ69 397 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 FBXL12Q9NXK8 326 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 AK3Q9UIJ7 227 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 SCN10AQ9Y5Y9 1956 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 BTAF1O14981 1849 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 TPRP12270 2363 aaKnown RBP2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 KIAA0100Q14667 2235 aaKnown RBP2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 LTN1O94822 1766 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 ADAMTSL1Q8N6G6 1762 aa2.21□□□□□ -2.06
HERPUD1-211ENST00000566550 ACACBO00763 2458 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 CCDC88AQ3V6T2 1871 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 ARHGAP31Q2M1Z3 1444 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 NSD3Q9BZ95 1437 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 WNK3Q9BYP7 1800 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 TRAV9-1A0A075B6T8 112 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 A0A1W2PRE2 83 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 IGLL5B9A064 214 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 CST8O60676 142 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 PIAS1O75925 651 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 ZNF682O95780 498 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 CGB3P0DN86 165 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 CGB7P0DN87 165 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 ZNF19P17023 458 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 SPI1P17947 270 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 NTF3P20783 257 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 PPIBP23284 216 aaKnown RBP2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 CRABP2P29373 138 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 ATP5G3P48201 142 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 SERPINB10P48595 397 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 WNT4P56705 351 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 TAS2R45P59539 299 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 PSPHP78330 225 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 HOXC5Q00444 222 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 ENDOGQ14249 297 aaKnown RBP2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 UBE2SQ16763 222 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 IBA57Q5T440 356 aaKnown RBP2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 TMEM78Q5T7P6 136 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 Q6ZS49 121 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 GPHB5Q86YW7 130 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 SAXO1Q8IYX7 474 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 ZNF433Q8N7K0 673 aaPredicted RBP2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 ZNF721Q8TF20 911 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 C11orf40Q8WZ69 217 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 HIST1H2BAQ96A08 127 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 ELSPBP1Q96BH3 223 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 TSC22D3Q99576 134 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 SH3BGRL3Q9H299 93 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 LINC00574Q9H8X3 128 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 RPS10P5Q9NQ39 176 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 ICOSQ9Y6W8 199 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 QRICH2Q9H0J4 1663 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 DICER1Q9UPY3 1922 aaKnown RBP2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 SLIT3O75094 1523 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 ROBO3Q96MS0 1386 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 DOCK5Q9H7D0 1870 aa2.2□□□□□ -2.06
HERPUD1-211ENST00000566550 ARHGAP21Q5T5U3 1957 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 USP54Q70EL1 1684 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 SMG6Q86US8 1419 aaKnown RBP2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 REV3LO60673 3130 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 IGHV3OR15-7A0A075B7D8 119 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 A0A0B4J2C4 111 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 A8MWP4 228 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 E7EQ34 232 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms