RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-217	ENST00000565832	GNB1	P62873	340 aa		4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	RPL8	P62917	257 aa	Known RBP	4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	EIF5A	P63241	154 aa	Known RBP	4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	HBG1	P69891	147 aa		4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	HBG2	P69892	147 aa		4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	WT1-AS	Q06250	92 aa		4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	LRRC75B	Q2VPJ9	315 aa		4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	TPTE2P1	Q5T6R2	138 aa		4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	RUSC1-AS1	Q66K80	236 aa		4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	EIF5AL1	Q6IS14	154 aa	Known RBP	4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	BTNL8	Q6UX41	500 aa		4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	SSX7	Q7RTT5	188 aa		4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	PDPN	Q86YL7	162 aa		4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	OR52E5	Q8NH55	327 aa		4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	MARC2	Q969Z3	335 aa		4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	AJUBA	Q96IF1	538 aa		4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	CIB3	Q96Q77	187 aa	Predicted RBP	4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	TSNAX	Q99598	290 aa	Known RBP	4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	WDR61	Q9GZS3	305 aa	Known RBP	4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	NDUFA4L2	Q9NRX3	87 aa		4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	BET1L	Q9NYM9	111 aa		4.98	□□□□□ -1.61
CHD9-217	ENST00000565832	SMCO3	A2RU48	225 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	ODF3B	A8MYP8	253 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	PRSS46	E5RG02	174 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	IGKV1D-33	P01593	117 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	IGKV1-33	P01594	117 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	IL3RA	P26951	378 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	CAMLG	P49069	296 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	PRCD	Q00LT1	54 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	PSG5	Q15238	335 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	GCSAML	Q5JQS6	135 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	FAM120AOS	Q5T036	256 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	CLEC2A	Q6UVW9	174 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	BPIFC	Q8NFQ6	507 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	SCGB1C1	Q8TD33	95 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	TAF15	Q92804	592 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	NARS2	Q96I59	477 aa	Known RBP	4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	PIMREG	Q9BSJ6	248 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	COMMD5	Q9GZQ3	224 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	RPRM	Q9NS64	109 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	PRND	Q9UKY0	176 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	SIGLEC9	Q9Y336	463 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	SETD2	Q9BYW2	2564 aa	Predicted RBP	4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	MYO9A	B2RTY4	2548 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	VWC2L	B2RUY7	222 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	DFFB	O76075	338 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	VENTX	O95231	258 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	OR8U8	P0C7N1	319 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	OR13C7	P0DN81	318 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	PLA2G2A	P14555	144 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	AREG	P15514	252 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	FGF7	P21781	194 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	CD1B	P29016	333 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	DVL1P1	P54792	670 aa	Predicted RBP	4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	FGF8	P55075	233 aa	Predicted RBP	4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	SSBP2	P81877	361 aa	Predicted RBP	4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	HES1	Q14469	280 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	FAM71F2	Q6NXP2	309 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	ACSM6	Q6P461	480 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	BRD3OS	Q6XYD6	125 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	C1orf122	Q6ZSJ8	110 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	SLC24A4	Q8NFF2	622 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	TMEM167A	Q8TBQ9	72 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	SFT2D1	Q8WV19	159 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	CFHR4	Q92496	578 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	SAT2	Q96F10	170 aa	Predicted RBP	4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	RARRES2	Q99969	163 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	FAM103A1	Q9BTL3	118 aa	Known RBP	4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	PLEKHA3	Q9HB20	300 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	UQCC1	Q9NVA1	299 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	MED9	Q9NWA0	146 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	METTL1	Q9UBP6	276 aa	Known RBP	4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	KPTN	Q9Y664	436 aa		4.97	□□□□□ -1.61
CHD9-217	ENST00000565832	MTOR	P42345	2549 aa		4.96	□□□□□ -1.61
CHD9-217	ENST00000565832	IGHV3-21	A0A0B4J1V1	117 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	CENPVL3	A0A0U1RRI6	287 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	CRYGB	P07316	175 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	SNRNP70	P08621	437 aa	Known RBP	4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	USF1	P22415	310 aa	Predicted RBP	4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	NPY1R	P25929	384 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	SAA4	P35542	130 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	LGALS7	P47929	136 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	RAB2A	P61019	212 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	ZNF726P1	Q15940	193 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	TNXA	Q16473	311 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	PRSS8	Q16651	343 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	CLEC12B	Q2HXU8	276 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	PPP1R27	Q86WC6	154 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	RPP25L	Q8N5L8	163 aa	Known RBP	4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	OR2T6	Q8NHC8	308 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	LYPD6B	Q8NI32	183 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	NPCDR1	Q9BY65	106 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	ENY2	Q9NPA8	101 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	PARP11	Q9NR21	331 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	ZNF257	Q9Y2Q1	563 aa		4.96	□□□□□ -1.62
CHD9-217	ENST00000565832	FLNB	O75369	2602 aa	Known RBP	4.95	□□□□□ -1.62
CHD9-217	ENST00000565832	IGKV1OR2-108	A0A075B7D4	117 aa		4.95	□□□□□ -1.62

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