RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 BSCL2Q96G97 398 aaPredicted RBP4.8□□□□□ -1.64
TCF4-228ENST00000565393 CMTM3Q96MX0 182 aa4.8□□□□□ -1.64
TCF4-228ENST00000565393 CHRDL1Q9BU40 450 aa4.8□□□□□ -1.64
TCF4-228ENST00000565393 ZNF436Q9C0F3 470 aaPredicted RBP4.8□□□□□ -1.64
TCF4-228ENST00000565393 SCPEP1Q9HB40 452 aa4.8□□□□□ -1.64
TCF4-228ENST00000565393 ANAPC10Q9UM13 185 aa4.8□□□□□ -1.64
TCF4-228ENST00000565393 IGKV3-7A0A075B6H7 116 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 IGHV3-49A0A0A0MS15 119 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 OR4C46A6NHA9 309 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 DBX1A6NMT0 343 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 NDUFA4O00483 81 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 SPRY2O43597 315 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 IFNA17P01571 189 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 IGHV3-48P01763 117 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 CTSDP07339 412 aaPredicted RBP4.79□□□□□ -1.64
TCF4-228ENST00000565393 CTSGP08311 255 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 ZNF182P17025 639 aaPredicted RBP4.79□□□□□ -1.64
TCF4-228ENST00000565393 RPL35AP18077 110 aaKnown RBP4.79□□□□□ -1.64
TCF4-228ENST00000565393 SNCAP37840 140 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 TFPI2P48307 235 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 APOC4P55056 127 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 UCP3P55916 312 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 CMC4P56277 68 aaPredicted RBP4.79□□□□□ -1.64
TCF4-228ENST00000565393 HSPE1P61604 102 aaKnown RBP4.79□□□□□ -1.64
TCF4-228ENST00000565393 RPL11P62913 178 aaKnown RBP4.79□□□□□ -1.64
TCF4-228ENST00000565393 RELQ04864 619 aaPredicted RBP4.79□□□□□ -1.64
TCF4-228ENST00000565393 SPINK9Q5DT21 86 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 RNASE10Q5GAN6 216 aaKnown RBP4.79□□□□□ -1.64
TCF4-228ENST00000565393 GPR107Q5VW38 600 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 WFDC3Q8IUB2 231 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 CADM3Q8N126 398 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 STPG3Q8N7X2 389 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 TMEM116Q8NCL8 245 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 OR1P1Q8NH06 330 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 MRGPRFQ96AM1 343 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 SPAG8Q99932 426 aaPredicted RBP4.79□□□□□ -1.64
TCF4-228ENST00000565393 OVOL2Q9BRP0 275 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 FXYD6Q9H0Q3 95 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 DAZ1Q9NQZ3 744 aaKnown RBP4.79□□□□□ -1.64
TCF4-228ENST00000565393 TMEM14BQ9NUH8 114 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 KLK11Q9UBX7 282 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 SMPXQ9UHP9 88 aa4.79□□□□□ -1.64
TCF4-228ENST00000565393 TRAV14DV4A0A0A6YYC5 116 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 C3orf85A0A1B0GTC6 90 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 C15orf61A6NNL5 157 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 C15orf62A8K5M9 175 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 K7EIM0 57 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 UBE2CO00762 179 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 TSPAN4O14817 238 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 RGS5O15539 181 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 GNG7O60262 68 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 ATG12O94817 140 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 MT-CO2P00403 227 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 CD3DP04234 171 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 PI3P19957 117 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 ADMP35318 185 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 ETV6P41212 452 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 SUB1P53999 127 aaKnown RBP eCLIP4.78□□□□□ -1.64
TCF4-228ENST00000565393 PAFAH1B2P68402 229 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 IZUMO4Q1ZYL8 232 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 TRIM16LQ309B1 348 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 SP6Q3SY56 376 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 SCGB2B2Q4G0G5 96 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 GBGT1Q8N5D6 347 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 DUSP18Q8NEJ0 188 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 ZFAND1Q8TCF1 268 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 C15orf40Q8WUR7 153 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 TMEM190Q8WZ59 177 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 AP3S1Q92572 193 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 SEC22AQ96IW7 307 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 ATP6V0BQ99437 205 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 TXN2Q99757 166 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 PDCD10Q9BUL8 212 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 RHPN1-AS1Q9BWJ2 59 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 C6orf62Q9GZU0 229 aaPredicted RBP4.78□□□□□ -1.64
TCF4-228ENST00000565393 ENY2Q9NPA8 101 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 EXTL2Q9UBQ6 330 aa4.78□□□□□ -1.64
TCF4-228ENST00000565393 IGHV3OR16-13A0A075B7E8 117 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 IGHV3-74A0A0B4J1X5 117 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 IGHV7-4-1A0A0J9YVY3 117 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 A0A0J9YWU9 116 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 CXorf65A6NEN9 183 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 F8W735 103 aaPredicted RBP4.77□□□□□ -1.65
TCF4-228ENST00000565393 I3L2K1 104 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 DNASE2O00115 360 aaPredicted RBP4.77□□□□□ -1.65
TCF4-228ENST00000565393 CHEK1O14757 476 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 RAB3DO95716 219 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 IGKV1-39P01597 117 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 IGKV1D-39P04432 117 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 BMI1P35226 326 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 NPBWR1P48145 328 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 AKR1C2P52895 323 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 PIGPP57054 158 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 PRCDQ00LT1 54 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 PMS2P11Q13670 270 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 Q6ZWC4 215 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 APRG1Q8IVJ8 170 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 SLC35G3Q8N808 338 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 OR52I2Q8NH67 350 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 TERB2Q8NHR7 220 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms