RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 CDH20Q9HBT6 801 aa4.25□□□□□ -1.73
CAPN3-214ENST00000565274 C1RLQ9NZP8 487 aa4.25□□□□□ -1.73
CAPN3-214ENST00000565274 RARRES3Q9UL19 164 aa4.25□□□□□ -1.73
CAPN3-214ENST00000565274 U3KQA8 63 aa4.25□□□□□ -1.73
CAPN3-214ENST00000565274 CDH23Q9H251 3354 aa4.25□□□□□ -1.73
CAPN3-214ENST00000565274 PCDH15Q96QU1 1955 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 IGHV5-10-1A0A0J9YXX1 117 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 A0A1W2PP11 408 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 RBFOX3A6NFN3 312 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 B4DEV8 164 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.24□□□□□ -1.73
CAPN3-214ENST00000565274 H3BQ15 152 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 CHEK1O14757 476 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 HIST1H2BKO60814 126 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 RAMP1O60894 148 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 SCRG1O75711 98 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 CLDN1O95832 211 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 MOSP00540 346 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 HBE1P02100 147 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 PRH1P02810 166 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 HIST1H2BJP06899 126 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 SP1P08047 785 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 SRP19P09132 144 aaKnown RBP4.24□□□□□ -1.73
CAPN3-214ENST00000565274 CXCL1P09341 107 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 LIFP15018 202 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 EVI2AP22794 236 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 HIST1H2BOP23527 126 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 ATP6V0CP27449 155 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 BLVRBP30043 206 aaPredicted RBP4.24□□□□□ -1.73
CAPN3-214ENST00000565274 HIST1H2BBP33778 126 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 SFTPDP35247 375 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 GUCA1AP43080 201 aaPredicted RBP4.24□□□□□ -1.73
CAPN3-214ENST00000565274 MAGEA5P43359 124 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 CXCL12P48061 93 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 RND2P52198 227 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 HIST1H2BDP58876 126 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 HSPE1P61604 102 aaKnown RBP4.24□□□□□ -1.73
CAPN3-214ENST00000565274 HIST1H2BCP62807 126 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 TNFAIP6P98066 277 aaPredicted RBP4.24□□□□□ -1.73
CAPN3-214ENST00000565274 MEF2BQ02080 365 aaPredicted RBP4.24□□□□□ -1.73
CAPN3-214ENST00000565274 TMEM267Q0VDI3 215 aaPredicted RBP4.24□□□□□ -1.73
CAPN3-214ENST00000565274 TCF15Q12870 199 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 ELOBQ15370 118 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 UBE2V2Q15819 145 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 HIST2H2BEQ16778 126 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.24□□□□□ -1.73
CAPN3-214ENST00000565274 TEX36Q5VZQ5 186 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 SP5Q6BEB4 398 aaPredicted RBP4.24□□□□□ -1.73
CAPN3-214ENST00000565274 DPPA3Q6W0C5 159 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 C16orf47Q6ZP98 133 aaPredicted RBP4.24□□□□□ -1.73
CAPN3-214ENST00000565274 FAM57BQ71RH2 274 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 C1QL2Q7Z5L3 287 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 SLC35G3Q8N808 338 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 ZIC4Q8N9L1 334 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 OR1B1Q8NGR6 318 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 HIST1H2BHQ93079 126 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 RBMXL1Q96E39 390 aaKnown RBP4.24□□□□□ -1.73
CAPN3-214ENST00000565274 TVP23CQ96ET8 276 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 DNAJA3Q96EY1 480 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 SPACA5Q96QH8 159 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 GPER1Q99527 375 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 HIST1H2BNQ99877 126 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 HIST1H2BMQ99879 126 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 PARP12Q9H0J9 701 aaKnown RBP4.24□□□□□ -1.73
CAPN3-214ENST00000565274 SH3BGRL3Q9H299 93 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 TMEM133Q9H2Q1 129 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 RBKSQ9H477 322 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 PROK2Q9HC23 129 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 LYRM2Q9NU23 88 aaPredicted RBP4.24□□□□□ -1.73
CAPN3-214ENST00000565274 AK3Q9UIJ7 227 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 ANXA10Q9UJ72 324 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 VDAC3Q9Y277 283 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 POLR1DQ9Y2S0 133 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 LOXL2Q9Y4K0 774 aa4.24□□□□□ -1.73
CAPN3-214ENST00000565274 LSM4Q9Y4Z0 139 aaKnown RBP4.24□□□□□ -1.73
CAPN3-214ENST00000565274 EXPH5Q8NEV8 1989 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 TDRD6O60522 2096 aaKnown RBP4.23□□□□□ -1.73
CAPN3-214ENST00000565274 BRWD1Q9NSI6 2320 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 PCNX3Q9H6A9 2034 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 IGKV1D-8A0A087WSZ0 117 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 IGHV1-45A0A0A0MS14 117 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 PIGBOS1A0A0B4J2F0 54 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 IGHV3-20A0A0C4DH32 117 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 ZNF816-ZNF321PA0A0X1KG74 233 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 DUXBA0A1W2PPF3 345 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 A0A1W2PRS3 328 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 ZNF732B4DXR9 585 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 SPRY2O43597 315 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 TNFSF13O75888 250 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 C1QL1O75973 258 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 CA1P00915 261 aaPredicted RBP4.23□□□□□ -1.73
CAPN3-214ENST00000565274 ZNF728P0DKX0 622 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 FABP4P15090 132 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 ORM2P19652 201 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 RPL13AP40429 203 aaKnown RBP4.23□□□□□ -1.73
CAPN3-214ENST00000565274 NKX2-1P43699 371 aaPredicted RBP4.23□□□□□ -1.73
CAPN3-214ENST00000565274 GLIPR1P48060 266 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 CLDN17P56750 224 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 B3GALT5-AS1P59052 145 aa4.23□□□□□ -1.73
CAPN3-214ENST00000565274 RND3P61587 244 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms