RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 LFNGQ8NES3 379 aa13.35□□□□□ -0.27
CMTM3-208ENST00000564247 PSENENQ9NZ42 101 aa13.35□□□□□ -0.27
CMTM3-208ENST00000564247 U3KQ87 197 aa13.35□□□□□ -0.27
CMTM3-208ENST00000564247 CLPSL1A2RUU4 121 aa13.34□□□□□ -0.27
CMTM3-208ENST00000564247 LINC01548A6NM66 108 aa13.34□□□□□ -0.27
CMTM3-208ENST00000564247 TEX22C9J3V5 150 aa13.34□□□□□ -0.27
CMTM3-208ENST00000564247 IFNA10P01566 189 aa13.34□□□□□ -0.27
CMTM3-208ENST00000564247 IGF1P05019 195 aa13.34□□□□□ -0.27
CMTM3-208ENST00000564247 EGR2P11161 476 aaPredicted RBP13.34□□□□□ -0.27
CMTM3-208ENST00000564247 NUP62P37198 522 aaPredicted RBP13.34□□□□□ -0.27
CMTM3-208ENST00000564247 HTR2BP41595 481 aa13.34□□□□□ -0.27
CMTM3-208ENST00000564247 ATP5IP56385 69 aaPredicted RBP13.34□□□□□ -0.27
CMTM3-208ENST00000564247 NDPQ00604 133 aa13.34□□□□□ -0.27
CMTM3-208ENST00000564247 RNF126Q9BV68 326 aa13.34□□□□□ -0.27
CMTM3-208ENST00000564247 GON7Q9BXV9 100 aa13.34□□□□□ -0.27
CMTM3-208ENST00000564247 WSB1Q9Y6I7 421 aa13.34□□□□□ -0.27
CMTM3-208ENST00000564247 TRAV41A0A0B4J266 112 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 A0A1B0GW64 132 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 IGLC7A0M8Q6 106 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 H0YIZ8 118 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 SMLR1H3BR10 107 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 CYB5BO43169 146 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 APELAP0DMC3 54 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 SLC25A4P12235 298 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 P2RY1P47900 373 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 RAB11AP62491 216 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 WT1-ASQ06250 92 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 ECSCRQ19T08 205 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 Q5BKY6 102 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 SPANXN5Q5MJ07 72 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 Q6ZS46 218 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 TTC9CQ8N5M4 171 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 OR2C3Q8N628 320 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 OR1L6Q8NGR2 347 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 OR2T6Q8NHC8 308 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 DCUN1D4Q92564 292 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 ZNF702PQ9H963 129 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 OR5AC2Q9NZP5 309 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 MBD2Q9UBB5 411 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 PAIP2BQ9ULR5 123 aaKnown RBP13.33□□□□□ -0.28
CMTM3-208ENST00000564247 STRAPQ9Y3F4 350 aaKnown RBP13.33□□□□□ -0.28
CMTM3-208ENST00000564247 FBXO7Q9Y3I1 522 aa13.33□□□□□ -0.28
CMTM3-208ENST00000564247 PKD1L1Q8TDX9 2849 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 TRAV14DV4A0A0A6YYC5 116 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 TSC22D2O75157 780 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 TSPAN9O75954 239 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 DEFA4P12838 97 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 LYL1P12980 280 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 CAV2P51636 162 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 CRIP2P52943 208 aaPredicted RBP13.32□□□□□ -0.28
CMTM3-208ENST00000564247 PAX9P55771 341 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 Q6ZSV7 163 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 Q8N2B8 174 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 SLC24A4Q8NFF2 622 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 OR5T1Q8NG75 326 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 LINC01006Q8NI28 216 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 WFDC12Q8WWY7 111 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 SLC25A31Q9H0C2 315 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 C16orf95Q9H693 158 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 TRRAPQ9Y4A5 3859 aa13.32□□□□□ -0.28
CMTM3-208ENST00000564247 FXYD6-FXYD2A0A087WZ82 144 aa13.31□□□□□ -0.28
CMTM3-208ENST00000564247 NPIPB5A8MRT5 1133 aa13.31□□□□□ -0.28
CMTM3-208ENST00000564247 REG1AP05451 166 aa13.31□□□□□ -0.28
CMTM3-208ENST00000564247 AREGP15514 252 aa13.31□□□□□ -0.28
CMTM3-208ENST00000564247 NPY1RP25929 384 aa13.31□□□□□ -0.28
CMTM3-208ENST00000564247 ZNF546Q86UE3 836 aa13.31□□□□□ -0.28
CMTM3-208ENST00000564247 INO80EQ8NBZ0 244 aaPredicted RBP13.31□□□□□ -0.28
CMTM3-208ENST00000564247 FAM110DQ8TAY7 271 aaPredicted RBP13.31□□□□□ -0.28
CMTM3-208ENST00000564247 ZC4H2Q9NQZ6 224 aa13.31□□□□□ -0.28
CMTM3-208ENST00000564247 LINC00527Q9UJ94 153 aa13.31□□□□□ -0.28
CMTM3-208ENST00000564247 ZNF580Q9UK33 172 aa13.31□□□□□ -0.28
CMTM3-208ENST00000564247 RNF114Q9Y508 228 aa13.31□□□□□ -0.28
CMTM3-208ENST00000564247 FAM24AA6NFZ4 105 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 G3V318 75 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 H3BP45 60 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 TMEM50AO95807 157 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 C1QBP02746 253 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 CRYGCP07315 174 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 OR8U8P0C7N1 319 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 CTRB1P17538 263 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 SLC35B1P78383 322 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 ZFP69Q49AA0 526 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 C2orf83Q53S99 150 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 ASPHD1Q5U4P2 390 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 CTRB2Q6GPI1 263 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 SLC25A24Q6NUK1 477 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 TMEM65Q6PI78 240 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 STPG2Q8N412 459 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 NOL4LQ96MY1 436 aaPredicted RBP13.3□□□□□ -0.28
CMTM3-208ENST00000564247 WNT10AQ9GZT5 417 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 C11orf1Q9H5F2 150 aa13.3□□□□□ -0.28
CMTM3-208ENST00000564247 LYRM2Q9NU23 88 aaPredicted RBP13.3□□□□□ -0.28
CMTM3-208ENST00000564247 FBXO24O75426 580 aa13.29□□□□□ -0.28
CMTM3-208ENST00000564247 SCAF4O95104 1147 aaKnown RBP13.29□□□□□ -0.28
CMTM3-208ENST00000564247 IFNA4P05014 189 aa13.29□□□□□ -0.28
CMTM3-208ENST00000564247 RNASE2P10153 161 aaKnown RBP13.29□□□□□ -0.28
CMTM3-208ENST00000564247 CD300CQ08708 224 aa13.29□□□□□ -0.28
CMTM3-208ENST00000564247 CENPVQ7Z7K6 275 aaPredicted RBP13.29□□□□□ -0.28
CMTM3-208ENST00000564247 STX12Q86Y82 276 aa13.29□□□□□ -0.28
CMTM3-208ENST00000564247 ZNF114Q8NC26 417 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms