RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 CCL13Q99616 98 aa10.56□□□□□ -0.72
COMMD4-209ENST00000564068 CACNA1AO00555 2505 aa10.56□□□□□ -0.72
COMMD4-209ENST00000564068 NCOR2Q9Y618 2525 aa10.56□□□□□ -0.72
COMMD4-209ENST00000564068 IGLV3-12A0A075B6K2 115 aa10.56□□□□□ -0.72
COMMD4-209ENST00000564068 IGLV3-32A0A0A0MS00 114 aa10.56□□□□□ -0.72
COMMD4-209ENST00000564068 ZNF716A6NP11 495 aa10.56□□□□□ -0.72
COMMD4-209ENST00000564068 RBFOX2O43251 390 aaKnown RBP eCLIP10.56□□□□□ -0.72
COMMD4-209ENST00000564068 C3orf79P0CE67 100 aa10.56□□□□□ -0.72
COMMD4-209ENST00000564068 SPATA31B1PQ5VZV4 182 aa10.56□□□□□ -0.72
COMMD4-209ENST00000564068 ZNF841Q6ZN19 808 aa10.56□□□□□ -0.72
COMMD4-209ENST00000564068 CALYQ9NYX4 217 aa10.56□□□□□ -0.72
COMMD4-209ENST00000564068 RNF115Q9Y4L5 304 aa10.56□□□□□ -0.72
COMMD4-209ENST00000564068 PLXNB3Q9ULL4 1909 aa10.56□□□□□ -0.72
COMMD4-209ENST00000564068 NOTCH3Q9UM47 2321 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 TRAV9-2A0A087WT02 112 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 KLK10O43240 276 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 PTGDSP41222 190 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 EFNB3Q15768 340 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 INO80CQ6PI98 192 aaPredicted RBP10.55□□□□□ -0.72
COMMD4-209ENST00000564068 HIGD1CA8MV81 97 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 PPIAL4DF5H284 164 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 TMEM97Q5BJF2 176 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 SLC35E4Q6ICL7 350 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 LYPD6Q86Y78 171 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 GAL3ST2Q9H3Q3 398 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 SEPSECSQ9HD40 501 aaKnown RBP10.55□□□□□ -0.72
COMMD4-209ENST00000564068 HYPMO75409 117 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 REG1AP05451 166 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 TBR1Q16650 682 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 TM4SF20Q53R12 229 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 TREML4Q6UXN2 200 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 PPP1R14DQ9NXH3 145 aa10.55□□□□□ -0.72
COMMD4-209ENST00000564068 K7ESF4 209 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 OR9G9P0C7N8 305 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 TNFRSF1AP19438 455 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 RPL11P62913 178 aaKnown RBP10.54□□□□□ -0.72
COMMD4-209ENST00000564068 RSPO1Q2MKA7 263 aaPredicted RBP10.54□□□□□ -0.72
COMMD4-209ENST00000564068 TMEM42Q69YG0 159 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 SRSF12Q8WXF0 261 aaKnown RBP10.54□□□□□ -0.72
COMMD4-209ENST00000564068 ZPBPQ9BS86 351 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 PEF1Q9UBV8 284 aaKnown RBP10.54□□□□□ -0.72
COMMD4-209ENST00000564068 NCOA6Q14686 2063 aaPredicted RBP10.54□□□□□ -0.72
COMMD4-209ENST00000564068 TRAV9-1A0A075B6T8 112 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 CELA3BP08861 270 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 COX7A1P24310 79 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 LRRC10Q5BKY1 277 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 IMMP1LQ96LU5 166 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 CRIM1Q9NZV1 1036 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 GPX1P07203 203 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 FABP2P12104 132 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 ARF6P62330 175 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 HBBP68871 147 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 PSG7Q13046 419 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 ZNF497Q6ZNH5 498 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 SAP25Q8TEE9 199 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 GNB1LQ9BYB4 327 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 AP5S1Q9NUS5 200 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 PLXNA2O75051 1894 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 STAG3L2P0CL84 134 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 STAG3L3P0CL85 134 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 PRSS8Q16651 343 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 TCF24Q7RTU0 167 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 GGTLC1Q9BX51 225 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 TNFRSF19Q9NS68 423 aa10.54□□□□□ -0.72
COMMD4-209ENST00000564068 COL4A3Q01955 1670 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 ORM1P02763 201 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 CCL8P80075 99 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 ZNF585BQ52M93 769 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 Q6ZWC4 215 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 RNF7Q9UBF6 113 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 DOPEY2Q9Y3R5 2298 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 LGALS4P56470 323 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 FAM201AQ5SY85 155 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 ARL6IP6Q8N6S5 226 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 PSPNO60542 156 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 FOXH1O75593 365 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 SCGB1C2P0DMR2 95 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 RIPPLY3P57055 190 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 AMMECR1LQ6DCA0 310 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 PET117Q6UWS5 81 aa10.53□□□□□ -0.72
COMMD4-209ENST00000564068 ZNF430Q9H8G1 570 aaPredicted RBP10.53□□□□□ -0.72
COMMD4-209ENST00000564068 IZUMO1RA6ND01 250 aa10.52□□□□□ -0.72
COMMD4-209ENST00000564068 MOSP00540 346 aa10.52□□□□□ -0.72
COMMD4-209ENST00000564068 LIPFP07098 398 aa10.52□□□□□ -0.72
COMMD4-209ENST00000564068 CA7P43166 264 aa10.52□□□□□ -0.72
COMMD4-209ENST00000564068 PRRX1P54821 245 aa10.52□□□□□ -0.72
COMMD4-209ENST00000564068 DEFB109BQ30KR1 87 aa10.52□□□□□ -0.72
COMMD4-209ENST00000564068 ZADH2Q8N4Q0 377 aa10.52□□□□□ -0.72
COMMD4-209ENST00000564068 ITLN1Q8WWA0 313 aa10.52□□□□□ -0.72
COMMD4-209ENST00000564068 C20orf144Q9BQM9 153 aa10.52□□□□□ -0.72
COMMD4-209ENST00000564068 CDC42EP3Q9UKI2 254 aa10.52□□□□□ -0.72
COMMD4-209ENST00000564068 ZNF785A8K8V0 405 aa10.52□□□□□ -0.73
COMMD4-209ENST00000564068 MPV17L2Q567V2 206 aa10.52□□□□□ -0.73
COMMD4-209ENST00000564068 PEAR1Q5VY43 1037 aaPredicted RBP10.52□□□□□ -0.73
COMMD4-209ENST00000564068 MRPL14Q6P1L8 145 aaKnown RBP10.52□□□□□ -0.73
COMMD4-209ENST00000564068 ZNF114Q8NC26 417 aa10.52□□□□□ -0.73
COMMD4-209ENST00000564068 TMEM116Q8NCL8 245 aa10.52□□□□□ -0.73
COMMD4-209ENST00000564068 RASL11BQ9BPW5 248 aa10.52□□□□□ -0.73
COMMD4-209ENST00000564068 NAA38Q9BRA0 125 aaKnown RBP10.52□□□□□ -0.73
COMMD4-209ENST00000564068 JPT1Q9UK76 154 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms