RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 SFRP2Q96HF1 295 aa8.69□□□□□ -1.02
RNF40-204ENST00000563683 ZNF714Q96N38 554 aa8.69□□□□□ -1.02
RNF40-204ENST00000563683 TMEM167BQ9NRX6 74 aa8.69□□□□□ -1.02
RNF40-204ENST00000563683 NUPR1O60356 82 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 CD3EP07766 207 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 PTTG1IPP53801 180 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 LEMD1Q68G75 181 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 TMEM14EPQ6UXP3 125 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 TXNDC17Q9BRA2 123 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 MS4A5Q9H3V2 200 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 UQCR10Q9UDW1 63 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 INSIG2Q9Y5U4 225 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 DNAH14Q0VDD8 3507 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 TRANK1O15050 2925 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 SCGB2A1O75556 95 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 ATP5G3P48201 142 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 ZNF585BQ52M93 769 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 C1orf162Q8NEQ5 155 aaPredicted RBP8.68□□□□□ -1.02
RNF40-204ENST00000563683 RNF2Q99496 336 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 IDI2-AS1Q9NZ38 188 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 GRIFINA4D1Z8 144 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 NCBP2LA6PVI3 153 aaKnown RBP8.68□□□□□ -1.02
RNF40-204ENST00000563683 C1QTNF9BB2RNN3 333 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 C10orf142B7Z368 130 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 CA2P00918 260 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 GATA2P23769 480 aaPredicted RBP8.68□□□□□ -1.02
RNF40-204ENST00000563683 MORN2Q502X0 79 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 GCSAMQ8N6F7 178 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 TXN2Q99757 166 aa8.68□□□□□ -1.02
RNF40-204ENST00000563683 FGF23Q9GZV9 251 aaPredicted RBP8.68□□□□□ -1.02
RNF40-204ENST00000563683 A0A1B0GUS0 222 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 SNURFLB1AK76 121 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 RRHO14718 337 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 OR9G9P0C7N8 305 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 ORAOV1Q8WV07 137 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 COQ2Q96H96 371 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 TRBV6-6A0A0A6YYG2 114 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 A0A1W2PN81 502 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 PGPEP1LA6NFU8 196 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 LINC00473A8K010 186 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 SLC25A17O43808 307 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 SERF1AO75920 110 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 REG1AP05451 166 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 PRB3Q04118 309 aaPredicted RBP8.67□□□□□ -1.02
RNF40-204ENST00000563683 RPEL1Q2QD12 228 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 KRTCAP3Q53RY4 240 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 WDR86Q86TI4 376 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 KLHDC1Q8N7A1 406 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 ARHGAP21Q5T5U3 1957 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 ITGB1BP1O14713 200 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 CD40P25942 277 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 DUTP33316 252 aaKnown RBP8.67□□□□□ -1.02
RNF40-204ENST00000563683 OR4A47Q6IF82 309 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 STPG3Q8N7X2 389 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 STARD4Q96DR4 205 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 SGK494Q96LW2 274 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 HSPB7Q9UBY9 170 aa8.67□□□□□ -1.02
RNF40-204ENST00000563683 HSBP1O75506 76 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 MMP23AO75900 390 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 CRYBB3P26998 211 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 TFPI2P48307 235 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 HNRNPA3P51991 378 aaKnown RBP8.66□□□□□ -1.02
RNF40-204ENST00000563683 LYZP61626 148 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 RPL8P62917 257 aaKnown RBP8.66□□□□□ -1.02
RNF40-204ENST00000563683 KRTAP27-1Q3LI81 207 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 TDRG1Q3Y452 100 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 CD177Q8N6Q3 437 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 MRPL18Q9H0U6 180 aaKnown RBP8.66□□□□□ -1.02
RNF40-204ENST00000563683 DIRC3C9JPN6 131 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 ZNF253O75346 499 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 IGKV1-39P01597 117 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 IGKV1D-39P04432 117 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 LINC00869P0C866 280 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 TCF23Q7RTU1 214 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 NHLRC2Q8NBF2 726 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 IL19Q9UHD0 177 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 MED12LQ86YW9 2145 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 TDGF1P13385 188 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 CCL3L1P16619 93 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 PRRX1P54821 245 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 Q0VG73 95 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 ABHD17AQ96GS6 310 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 SZT2Q5T011 3432 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 MALRD1Q5VYJ5 2156 aa8.66□□□□□ -1.02
RNF40-204ENST00000563683 TRBV9A0A0B4J1U6 114 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 KBTBD11-OT1A0A1B0GTJ5 212 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 C1QTNF9P0C862 333 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 IGFBP2P18065 325 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 CD33P20138 364 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 AMTP48728 403 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 FXYD3Q14802 87 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 DAZAP2Q15038 168 aaPredicted RBP8.65□□□□□ -1.02
RNF40-204ENST00000563683 PQLC2Q6ZP29 291 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 OR1L6Q8NGR2 347 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 CHEK1O14757 476 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 CDKN1AP38936 164 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 TMEM249Q2WGJ8 235 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 SPATA45Q537H7 98 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 PEAR1Q5VY43 1037 aaPredicted RBP8.65□□□□□ -1.02
RNF40-204ENST00000563683 C10orf113Q5VZT2 155 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 208.6 ms