RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 PCDH15Q96QU1 1955 aa6.31□□□□□ -1.4
TCF4-216ENST00000562680 A0A1W2PRD5 423 aa6.31□□□□□ -1.4
TCF4-216ENST00000562680 A0A1W2PRF3 423 aa6.31□□□□□ -1.4
TCF4-216ENST00000562680 A0A1W2PRM7 423 aa6.31□□□□□ -1.4
TCF4-216ENST00000562680 FAM90A9PA6NNJ1 464 aa6.31□□□□□ -1.4
TCF4-216ENST00000562680 OOSP1A8MZH6 123 aa6.31□□□□□ -1.4
TCF4-216ENST00000562680 ZNF735P0CB33 412 aa6.31□□□□□ -1.4
TCF4-216ENST00000562680 MAS1LP35410 378 aa6.31□□□□□ -1.4
TCF4-216ENST00000562680 TCL1AP56279 114 aa6.31□□□□□ -1.4
TCF4-216ENST00000562680 HERV-K104P63124 156 aa6.31□□□□□ -1.4
TCF4-216ENST00000562680 POU2AF1Q16633 256 aa6.31□□□□□ -1.4
TCF4-216ENST00000562680 TMEM155Q4W5P6 130 aa6.31□□□□□ -1.4
TCF4-216ENST00000562680 PNKDQ8N490 385 aa6.31□□□□□ -1.4
TCF4-216ENST00000562680 LRTM2Q8N967 370 aa6.31□□□□□ -1.4
TCF4-216ENST00000562680 TXNDC17Q9BRA2 123 aa6.31□□□□□ -1.4
TCF4-216ENST00000562680 INTS1Q8N201 2190 aaKnown RBP6.31□□□□□ -1.4
TCF4-216ENST00000562680 GALR1P47211 349 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 C5orf47Q569G3 176 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 Q6ZSR3 168 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 HIST3H2BBQ8N257 126 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 Q8WTZ3 238 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 GTSF1LQ9H1H1 148 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 AAMDCQ9H7C9 122 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 PARP11Q9NR21 331 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 TCF19Q9Y242 345 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 TIMM9Q9Y5J7 89 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 IGLV3-9A0A075B6K5 115 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 CTXND1A0A1B0GTU2 59 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 REG1BP48304 166 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 QTRT1Q9BXR0 403 aaKnown RBP6.3□□□□□ -1.4
TCF4-216ENST00000562680 RPUSD1Q9UJJ7 312 aaKnown RBP6.3□□□□□ -1.4
TCF4-216ENST00000562680 TBL2Q9Y4P3 447 aaKnown RBP6.3□□□□□ -1.4
TCF4-216ENST00000562680 K7EP13 123 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 CD55P08174 381 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 BTCP35070 178 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 CRYBA4P53673 196 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 HEPN1Q6WQI6 88 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 ZNF664Q8N3J9 261 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 SMIM7Q9BQ49 75 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 RTBDNQ9BSG5 229 aaPredicted RBP6.3□□□□□ -1.4
TCF4-216ENST00000562680 TMUB1Q9BVT8 246 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 IL36RNQ9UBH0 155 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 HSBP1O75506 76 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 S1PR2O95136 353 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 GNG4P50150 75 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 ZNF90Q03938 601 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 PRR30Q53SZ7 412 aaPredicted RBP6.3□□□□□ -1.4
TCF4-216ENST00000562680 OR4P4Q8NGL7 312 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 GINS3Q9BRX5 216 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 TMEM133Q9H2Q1 129 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 SS18L2Q9UHA2 77 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 MLNRO43193 412 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 FAM3BP58499 235 aaPredicted RBP6.3□□□□□ -1.4
TCF4-216ENST00000562680 PERPQ96FX8 193 aa6.3□□□□□ -1.4
TCF4-216ENST00000562680 SPTBN1Q01082 2364 aaKnown RBP6.29□□□□□ -1.4
TCF4-216ENST00000562680 FAM157AC9JC47 383 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 NUDT3O95989 172 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 RBKSQ9H477 322 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 HSPB8Q9UJY1 196 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 COL5A1P20908 1838 aaPredicted RBP6.29□□□□□ -1.4
TCF4-216ENST00000562680 C5orf63A6NC05 138 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 CEACAM18A8MTB9 384 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 ISLRO14498 428 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 SLC35B1P78383 322 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 MORN2Q502X0 79 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 FAM201AQ5SY85 155 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 FAM78BQ5VT40 261 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 Q6P435 159 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 C19orf24Q9BVV8 132 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 LMO1P25800 156 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 H2BFSP57053 126 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 ZNF324BQ6AW86 544 aaPredicted RBP6.29□□□□□ -1.4
TCF4-216ENST00000562680 ZNF788Q6ZQV5 615 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 CYSLTR1Q9Y271 337 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 PCNX1Q96RV3 2341 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 ATP6V0CP27449 155 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 NTF4P34130 210 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 C5orf30Q96GV9 206 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 HILPDAQ9Y5L2 63 aa6.29□□□□□ -1.4
TCF4-216ENST00000562680 SPTAN1Q13813 2472 aaKnown RBP6.29□□□□□ -1.4
TCF4-216ENST00000562680 PMCHL1Q16048 86 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 RSPO1Q2MKA7 263 aaPredicted RBP6.28□□□□□ -1.4
TCF4-216ENST00000562680 CXorf66Q5JRM2 361 aaPredicted RBP6.28□□□□□ -1.4
TCF4-216ENST00000562680 SSC4DQ8WTU2 575 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 ZNF835Q9Y2P0 537 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 ZGRF1Q86YA3 2104 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 CGAP01215 116 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 SPINK9Q5DT21 86 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 YTHDF2Q9Y5A9 579 aaKnown RBP6.28□□□□□ -1.4
TCF4-216ENST00000562680 COL4A2P08572 1712 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 A4D1N5 150 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 H3BQ15 152 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 M0R1W7 72 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 RPL11P62913 178 aaKnown RBP6.28□□□□□ -1.4
TCF4-216ENST00000562680 ELOBQ15370 118 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 HLA-DRB5Q30154 266 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 KRTAP27-1Q3LI81 207 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 OR5A1Q8NGJ0 315 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 RNF5Q99942 180 aa6.28□□□□□ -1.4
TCF4-216ENST00000562680 TMEM204Q9BSN7 226 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms