RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 DEFB125Q8N687 156 aa0.62□□□□□ -2.31
DENND4A-205ENST00000562540 ZNF439Q8NDP4 499 aa0.62□□□□□ -2.31
DENND4A-205ENST00000562540 AQP3Q92482 292 aa0.62□□□□□ -2.31
DENND4A-205ENST00000562540 USE1Q9NZ43 259 aa0.62□□□□□ -2.31
DENND4A-205ENST00000562540 C22orf24Q9Y442 160 aa0.62□□□□□ -2.31
DENND4A-205ENST00000562540 TTC21AQ8NDW8 1320 aa0.62□□□□□ -2.31
DENND4A-205ENST00000562540 FUOMA2VDF0 154 aa0.61□□□□□ -2.31
DENND4A-205ENST00000562540 LRRN3E7EW58 273 aa0.61□□□□□ -2.31
DENND4A-205ENST00000562540 OR5F1O95221 314 aa0.61□□□□□ -2.31
DENND4A-205ENST00000562540 TPM3P06753 285 aa0.61□□□□□ -2.31
DENND4A-205ENST00000562540 ZNF80P51504 273 aaPredicted RBP0.61□□□□□ -2.31
DENND4A-205ENST00000562540 NAA20P61599 178 aa0.61□□□□□ -2.31
DENND4A-205ENST00000562540 CCL20P78556 96 aa0.61□□□□□ -2.31
DENND4A-205ENST00000562540 IFITM2Q01629 132 aa0.61□□□□□ -2.31
DENND4A-205ENST00000562540 GUK1Q16774 197 aa0.61□□□□□ -2.31
DENND4A-205ENST00000562540 COQ5Q5HYK3 327 aa0.61□□□□□ -2.31
DENND4A-205ENST00000562540 SYPL2Q5VXT5 272 aa0.61□□□□□ -2.31
DENND4A-205ENST00000562540 GPR32P1Q8NGA4 272 aa0.61□□□□□ -2.31
DENND4A-205ENST00000562540 CISHQ9NSE2 258 aa0.61□□□□□ -2.31
DENND4A-205ENST00000562540 KIF13BQ9NQT8 1826 aa0.61□□□□□ -2.31
DENND4A-205ENST00000562540 ZFC3H1O60293 1989 aaKnown RBP0.61□□□□□ -2.31
DENND4A-205ENST00000562540 A0A0J9YY10 115 aa0.6□□□□□ -2.31
DENND4A-205ENST00000562540 A0A1B0GX78 115 aa0.6□□□□□ -2.31
DENND4A-205ENST00000562540 RNASE3P12724 160 aaKnown RBP0.6□□□□□ -2.31
DENND4A-205ENST00000562540 CASQ1P31415 396 aa0.6□□□□□ -2.31
DENND4A-205ENST00000562540 TCL1AP56279 114 aa0.6□□□□□ -2.31
DENND4A-205ENST00000562540 UBE2IP63279 158 aaKnown RBP0.6□□□□□ -2.31
DENND4A-205ENST00000562540 KISS1Q15726 138 aa0.6□□□□□ -2.31
DENND4A-205ENST00000562540 TEX36Q5VZQ5 186 aa0.6□□□□□ -2.31
DENND4A-205ENST00000562540 OR2T4Q8NH00 348 aa0.6□□□□□ -2.31
DENND4A-205ENST00000562540 MCFD2Q8NI22 146 aa0.6□□□□□ -2.31
DENND4A-205ENST00000562540 RASSF5Q8WWW0 418 aa0.6□□□□□ -2.31
DENND4A-205ENST00000562540 LSM5Q9Y4Y9 91 aaKnown RBP0.6□□□□□ -2.31
DENND4A-205ENST00000562540 EVC2Q86UK5 1308 aa0.6□□□□□ -2.31
DENND4A-205ENST00000562540 DOCK5Q9H7D0 1870 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 GLI3P10071 1580 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 DCCP43146 1447 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 ASCC3Q8N3C0 2202 aaKnown RBP0.59□□□□□ -2.31
DENND4A-205ENST00000562540 A0A087WX48 190 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 INMT-MINDY4F8WBC2 141 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 ISG15P05161 165 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 HTR1AP08908 422 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 TPM4P67936 248 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 PMAIP1Q13794 54 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 HIST2H3PS2Q5TEC6 136 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 AADACL3Q5VUY0 350 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 RPL22L1Q6P5R6 122 aaKnown RBP0.59□□□□□ -2.31
DENND4A-205ENST00000562540 DPPA3Q6W0C5 159 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 BPIFA4PQ86YQ2 179 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 DERL1Q9BUN8 251 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 WDR61Q9GZS3 305 aaKnown RBP0.59□□□□□ -2.31
DENND4A-205ENST00000562540 OR51I1Q9H343 314 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 CKLFQ9UBR5 152 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 ATP6V1DQ9Y5K8 247 aa0.59□□□□□ -2.31
DENND4A-205ENST00000562540 PIK3R4Q99570 1358 aa0.58□□□□□ -2.32
DENND4A-205ENST00000562540 EIF4G1Q04637 1599 aaKnown RBP0.58□□□□□ -2.32
DENND4A-205ENST00000562540 A0A0D9SG52 128 aa0.58□□□□□ -2.32
DENND4A-205ENST00000562540 ACOX3O15254 700 aa0.58□□□□□ -2.32
DENND4A-205ENST00000562540 DCTN3O75935 186 aa0.58□□□□□ -2.32
DENND4A-205ENST00000562540 RAB5BP61020 215 aa0.58□□□□□ -2.32
DENND4A-205ENST00000562540 SFXN4Q6P4A7 337 aa0.58□□□□□ -2.32
DENND4A-205ENST00000562540 OOSP2Q86WS3 158 aa0.58□□□□□ -2.32
DENND4A-205ENST00000562540 PHF13Q86YI8 300 aaPredicted RBP0.58□□□□□ -2.32
DENND4A-205ENST00000562540 IQCF2Q8IXL9 164 aa0.58□□□□□ -2.32
DENND4A-205ENST00000562540 OR51D1Q8NGF3 324 aa0.58□□□□□ -2.32
DENND4A-205ENST00000562540 OR4D11Q8NGI4 311 aa0.58□□□□□ -2.32
DENND4A-205ENST00000562540 OR4C6Q8NH72 309 aa0.58□□□□□ -2.32
DENND4A-205ENST00000562540 SCGB3A1Q96QR1 104 aa0.58□□□□□ -2.32
DENND4A-205ENST00000562540 GINS4Q9BRT9 223 aa0.58□□□□□ -2.32
DENND4A-205ENST00000562540 NKIRAS1Q9NYS0 192 aa0.58□□□□□ -2.32
DENND4A-205ENST00000562540 CEP192Q8TEP8 1941 aa0.58□□□□□ -2.32
DENND4A-205ENST00000562540 LAMB4A4D0S4 1761 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 TRBV6-7A0A0A0MS04 114 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 EEF1E1-BLOC1S5C9J1V9 151 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 CETN3O15182 167 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 FADS1O60427 444 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 CLPSP04118 112 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 HIST1H2BOP23527 126 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 BRS3P32247 399 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 HIST1H2BBP33778 126 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 ZNF93P35789 620 aaPredicted RBP0.57□□□□□ -2.32
DENND4A-205ENST00000562540 AP2S1P53680 142 aaPredicted RBP0.57□□□□□ -2.32
DENND4A-205ENST00000562540 HIST1H2BDP58876 126 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 HIST1H2BCP62807 126 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 HBA1P69905 142 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 KCNJ8Q15842 424 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 HIST2H2BEQ16778 126 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 SPANXN3Q5MJ09 141 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.57□□□□□ -2.32
DENND4A-205ENST00000562540 LPCAT4Q643R3 524 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 CD200R1LQ6Q8B3 271 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 Q6ZQT0 140 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 ZNF826PQ6ZT77 177 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 HIST1H2BHQ93079 126 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 HIST1H2BNQ99877 126 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 HIST1H2BMQ99879 126 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 LLPHQ9BRT6 129 aaKnown RBP0.57□□□□□ -2.32
DENND4A-205ENST00000562540 SLC50A1Q9BRV3 221 aa0.57□□□□□ -2.32
DENND4A-205ENST00000562540 HEATR1Q9H583 2144 aaKnown RBP0.57□□□□□ -2.32
DENND4A-205ENST00000562540 CHD3Q12873 2000 aaKnown RBP0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms