RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 ETV7Q9Y603 341 aa8.49□□□□□ -1.05
NSMCE1-202ENST00000561960 ELOA3CA0A087WX78 387 aaPredicted RBP8.48□□□□□ -1.05
NSMCE1-202ENST00000561960 SLC22A5O76082 557 aa8.48□□□□□ -1.05
NSMCE1-202ENST00000561960 PPYP01298 95 aa8.48□□□□□ -1.05
NSMCE1-202ENST00000561960 CTSGP08311 255 aa8.48□□□□□ -1.05
NSMCE1-202ENST00000561960 NQO2P16083 231 aa8.48□□□□□ -1.05
NSMCE1-202ENST00000561960 C4BPBP20851 252 aa8.48□□□□□ -1.05
NSMCE1-202ENST00000561960 PSMA1P25786 263 aaKnown RBP8.48□□□□□ -1.05
NSMCE1-202ENST00000561960 G6PCP35575 357 aa8.48□□□□□ -1.05
NSMCE1-202ENST00000561960 BEST4Q8NFU0 473 aa8.48□□□□□ -1.05
NSMCE1-202ENST00000561960 SLC25A46Q96AG3 418 aa8.48□□□□□ -1.05
NSMCE1-202ENST00000561960 PINX1Q96BK5 328 aaKnown RBP8.48□□□□□ -1.05
NSMCE1-202ENST00000561960 RABAC1Q9UI14 185 aa8.48□□□□□ -1.05
NSMCE1-202ENST00000561960 OR51B2Q9Y5P1 312 aa8.48□□□□□ -1.05
NSMCE1-202ENST00000561960 F11RQ9Y624 299 aaKnown RBP8.48□□□□□ -1.05
NSMCE1-202ENST00000561960 TRAV18A0A075B6X5 111 aa8.47□□□□□ -1.05
NSMCE1-202ENST00000561960 TRAV1-2A0A0B4J238 106 aa8.47□□□□□ -1.05
NSMCE1-202ENST00000561960 ST8SIA3O43173 380 aa8.47□□□□□ -1.05
NSMCE1-202ENST00000561960 DFFBO76075 338 aa8.47□□□□□ -1.05
NSMCE1-202ENST00000561960 KRASP01116 189 aa8.47□□□□□ -1.05
NSMCE1-202ENST00000561960 GIG44P09565 113 aaPredicted RBP8.47□□□□□ -1.05
NSMCE1-202ENST00000561960 CTXN2P0C2S0 81 aa8.47□□□□□ -1.05
NSMCE1-202ENST00000561960 CLEC2LP0C7M8 214 aa8.47□□□□□ -1.05
NSMCE1-202ENST00000561960 TAS2R31P59538 309 aa8.47□□□□□ -1.05
NSMCE1-202ENST00000561960 OR5H6Q8NGV6 325 aa8.47□□□□□ -1.05
NSMCE1-202ENST00000561960 MS4A6AQ9H2W1 248 aa8.47□□□□□ -1.05
NSMCE1-202ENST00000561960 DUSP21Q9H596 190 aa8.47□□□□□ -1.05
NSMCE1-202ENST00000561960 C8orf4Q9NR00 106 aa8.47□□□□□ -1.05
NSMCE1-202ENST00000561960 TPRKBQ9Y3C4 175 aa8.47□□□□□ -1.05
NSMCE1-202ENST00000561960 NACAE9PAV3 2078 aa8.47□□□□□ -1.05
NSMCE1-202ENST00000561960 C15orf62A8K5M9 175 aa8.46□□□□□ -1.06
NSMCE1-202ENST00000561960 DNASE2O00115 360 aaPredicted RBP8.46□□□□□ -1.06
NSMCE1-202ENST00000561960 HPRT1P00492 218 aa8.46□□□□□ -1.06
NSMCE1-202ENST00000561960 MED14OSP0DP75 135 aa8.46□□□□□ -1.06
NSMCE1-202ENST00000561960 LPAR6P43657 344 aa8.46□□□□□ -1.06
NSMCE1-202ENST00000561960 MXD1Q05195 221 aa8.46□□□□□ -1.06
NSMCE1-202ENST00000561960 FAM90A2PQ658T7 463 aa8.46□□□□□ -1.06
NSMCE1-202ENST00000561960 SPSB3Q6PJ21 355 aa8.46□□□□□ -1.06
NSMCE1-202ENST00000561960 STHQ8IWL8 128 aa8.46□□□□□ -1.06
NSMCE1-202ENST00000561960 OR1L8Q8NGR8 309 aa8.46□□□□□ -1.06
NSMCE1-202ENST00000561960 NRG4Q8WWG1 115 aa8.46□□□□□ -1.06
NSMCE1-202ENST00000561960 DCSTAMPQ9H295 470 aa8.46□□□□□ -1.06
NSMCE1-202ENST00000561960 RNF167Q9H6Y7 350 aa8.46□□□□□ -1.06
NSMCE1-202ENST00000561960 NDUFA4L2Q9NRX3 87 aa8.46□□□□□ -1.06
NSMCE1-202ENST00000561960 RRP15Q9Y3B9 282 aaKnown RBP8.46□□□□□ -1.06
NSMCE1-202ENST00000561960 TRAV14DV4A0A0A6YYC5 116 aa8.45□□□□□ -1.06
NSMCE1-202ENST00000561960 MARCH11A6NNE9 402 aa8.45□□□□□ -1.06
NSMCE1-202ENST00000561960 K7EMT4 169 aa8.45□□□□□ -1.06
NSMCE1-202ENST00000561960 CASQ2O14958 399 aaPredicted RBP8.45□□□□□ -1.06
NSMCE1-202ENST00000561960 MRPS14O60783 128 aaKnown RBP8.45□□□□□ -1.06
NSMCE1-202ENST00000561960 ERVK-16P61578 105 aa8.45□□□□□ -1.06
NSMCE1-202ENST00000561960 CATR1Q13166 79 aa8.45□□□□□ -1.06
NSMCE1-202ENST00000561960 GSG1LQ6UXU4 331 aa8.45□□□□□ -1.06
NSMCE1-202ENST00000561960 PRSS48Q7RTY5 328 aa8.45□□□□□ -1.06
NSMCE1-202ENST00000561960 STXBP6Q8NFX7 210 aa8.45□□□□□ -1.06
NSMCE1-202ENST00000561960 FCAMRQ8WWV6 532 aa8.45□□□□□ -1.06
NSMCE1-202ENST00000561960 LSM10Q969L4 123 aaKnown RBP8.45□□□□□ -1.06
NSMCE1-202ENST00000561960 CMTM3Q96MX0 182 aa8.45□□□□□ -1.06
NSMCE1-202ENST00000561960 NDUFB11Q9NX14 153 aa8.45□□□□□ -1.06
NSMCE1-202ENST00000561960 LRP1BQ9NZR2 4599 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 TRAV10A0A0B4J240 114 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 C15orf61A6NNL5 157 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 EBAG9O00559 213 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 CYB5BO43169 146 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 MT-CO2P00403 227 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 ZNF688P0C7X2 276 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 RFX2P48378 723 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 IZUMO4Q1ZYL8 232 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 TOMM20LQ6UXN7 152 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 LINC00336Q6ZUF6 198 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 ZNF367Q7RTV3 350 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 SLC25A38Q96DW6 304 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 CNBD2Q96M20 576 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 VCXQ9H320 206 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 RHBDL2Q9NX52 303 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 X6R8D5 127 aa8.44□□□□□ -1.06
NSMCE1-202ENST00000561960 DEFB131BA0A096LNP1 70 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 TRDV1A0A1B0GX56 115 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 I3L2K1 104 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 RBFOX2O43251 390 aaKnown RBP eCLIP8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 GNG7O60262 68 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 PMP2P02689 132 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 EIF4EP06730 217 aaKnown RBP8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 GNRHRP30968 328 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 PPP5CP53041 499 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 EMP1P54849 157 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 HERV-K104P61576 105 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 RELQ04864 619 aaPredicted RBP8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 POU2AF1Q16633 256 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 C12orf74Q32Q52 190 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 PHLDA2Q53GA4 152 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 ACTL10Q5JWF8 245 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 TSPAN14Q8NG11 270 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 OR10C1Q96KK4 312 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 CENPOQ9BU64 300 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 NXF2Q9GZY0 626 aaKnown RBP8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 PLEKHA2Q9HB19 425 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 TXNL4BQ9NX01 149 aaKnown RBP8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 EHFQ9NZC4 300 aa8.43□□□□□ -1.06
NSMCE1-202ENST00000561960 HERC1Q15751 4861 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms