RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 FAM212BQ9NTI7 297 aaPredicted RBP10.74□□□□□ -0.69
SPG7-205ENST00000561945 UBQLN2Q9UHD9 624 aa10.74□□□□□ -0.69
SPG7-205ENST00000561945 DNAH2Q9P225 4427 aa10.74□□□□□ -0.69
SPG7-205ENST00000561945 FAT2Q9NYQ8 4349 aa10.74□□□□□ -0.69
SPG7-205ENST00000561945 DYNC1H1Q14204 4646 aaKnown RBP10.73□□□□□ -0.69
SPG7-205ENST00000561945 SLC25A24Q6NUK1 477 aa10.73□□□□□ -0.69
SPG7-205ENST00000561945 TMEM17Q86X19 198 aa10.73□□□□□ -0.69
SPG7-205ENST00000561945 CROCCP3Q8IVE0 287 aa10.73□□□□□ -0.69
SPG7-205ENST00000561945 TMEM217Q8N7C4 229 aa10.73□□□□□ -0.69
SPG7-205ENST00000561945 OR5B3Q8NH48 314 aa10.73□□□□□ -0.69
SPG7-205ENST00000561945 FCAMRQ8WWV6 532 aa10.73□□□□□ -0.69
SPG7-205ENST00000561945 DGCR14Q96DF8 476 aaKnown RBP10.73□□□□□ -0.69
SPG7-205ENST00000561945 TMEM14BQ9NUH8 114 aa10.73□□□□□ -0.69
SPG7-205ENST00000561945 SMPXQ9UHP9 88 aa10.73□□□□□ -0.69
SPG7-205ENST00000561945 KLK5Q9Y337 293 aaPredicted RBP10.73□□□□□ -0.69
SPG7-205ENST00000561945 RLN1P04808 185 aa10.72□□□□□ -0.69
SPG7-205ENST00000561945 HERV-K104P61576 105 aa10.72□□□□□ -0.69
SPG7-205ENST00000561945 ERVK-16P61578 105 aa10.72□□□□□ -0.69
SPG7-205ENST00000561945 PMS2P11Q13670 270 aa10.72□□□□□ -0.69
SPG7-205ENST00000561945 FAM90A2PQ658T7 463 aa10.72□□□□□ -0.69
SPG7-205ENST00000561945 ZNF114Q8NC26 417 aa10.72□□□□□ -0.69
SPG7-205ENST00000561945 OR1P1Q8NH06 330 aa10.72□□□□□ -0.69
SPG7-205ENST00000561945 TXN2Q99757 166 aa10.72□□□□□ -0.69
SPG7-205ENST00000561945 ZNF2Q9BSG1 426 aaPredicted RBP10.72□□□□□ -0.69
SPG7-205ENST00000561945 MRPS26Q9BYN8 205 aaKnown RBP10.72□□□□□ -0.69
SPG7-205ENST00000561945 FKBP11Q9NYL4 201 aa10.72□□□□□ -0.69
SPG7-205ENST00000561945 EHFQ9NZC4 300 aa10.72□□□□□ -0.69
SPG7-205ENST00000561945 PRNDQ9UKY0 176 aa10.72□□□□□ -0.69
SPG7-205ENST00000561945 OR51B2Q9Y5P1 312 aa10.72□□□□□ -0.69
SPG7-205ENST00000561945 DBX1A6NMT0 343 aa10.71□□□□□ -0.69
SPG7-205ENST00000561945 C15orf61A6NNL5 157 aa10.71□□□□□ -0.69
SPG7-205ENST00000561945 I3L2K1 104 aa10.71□□□□□ -0.69
SPG7-205ENST00000561945 CHEK1O14757 476 aa10.71□□□□□ -0.69
SPG7-205ENST00000561945 KRASP01116 189 aa10.71□□□□□ -0.69
SPG7-205ENST00000561945 CTSDP07339 412 aaPredicted RBP10.71□□□□□ -0.69
SPG7-205ENST00000561945 RPA2P15927 270 aa10.71□□□□□ -0.69
SPG7-205ENST00000561945 LPAR6P43657 344 aa10.71□□□□□ -0.69
SPG7-205ENST00000561945 CMC4P56277 68 aaPredicted RBP10.71□□□□□ -0.69
SPG7-205ENST00000561945 S100A16Q96FQ6 103 aaKnown RBP10.71□□□□□ -0.69
SPG7-205ENST00000561945 TMEM56Q96MV1 263 aa10.71□□□□□ -0.69
SPG7-205ENST00000561945 RNF2Q99496 336 aa10.71□□□□□ -0.69
SPG7-205ENST00000561945 FXYD6Q9H0Q3 95 aa10.71□□□□□ -0.69
SPG7-205ENST00000561945 IGHV7-4-1A0A0J9YVY3 117 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 GPR31O00270 319 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 FCER2P06734 321 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 G6PCP35575 357 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 RFX2P48378 723 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 TAS2R46P59540 309 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 LSM3P62310 102 aaKnown RBP10.7□□□□□ -0.7
SPG7-205ENST00000561945 RELQ04864 619 aaPredicted RBP10.7□□□□□ -0.7
SPG7-205ENST00000561945 UBE2NLQ5JXB2 153 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 LGALS9CQ6DKI2 356 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 LYSMD2Q8IV50 215 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 CMTM1Q8IZ96 169 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 GATAD1Q8WUU5 269 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 TSC22D3Q99576 134 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 FUNDC2Q9BWH2 189 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 IFT46Q9NQC8 304 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 NSG2Q9Y328 171 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 DNAH17Q9UFH2 4485 aa10.7□□□□□ -0.7
SPG7-205ENST00000561945 MEIS3P1A6NDR6 274 aa10.69□□□□□ -0.7
SPG7-205ENST00000561945 SNAPC5O75971 98 aa10.69□□□□□ -0.7
SPG7-205ENST00000561945 TMEM116Q8NCL8 245 aa10.69□□□□□ -0.7
SPG7-205ENST00000561945 OR6F1Q8NGZ6 308 aa10.69□□□□□ -0.7
SPG7-205ENST00000561945 SEC22AQ96IW7 307 aa10.69□□□□□ -0.7
SPG7-205ENST00000561945 C20orf24Q9BUV8 137 aa10.69□□□□□ -0.7
SPG7-205ENST00000561945 RHPN1-AS1Q9BWJ2 59 aa10.69□□□□□ -0.7
SPG7-205ENST00000561945 NXF2Q9GZY0 626 aaKnown RBP10.69□□□□□ -0.7
SPG7-205ENST00000561945 C11orf68Q9H3H3 251 aaKnown RBP10.69□□□□□ -0.7
SPG7-205ENST00000561945 IGHV3OR16-8A0A075B7F1 116 aa10.68□□□□□ -0.7
SPG7-205ENST00000561945 IGHV3-21A0A0B4J1V1 117 aa10.68□□□□□ -0.7
SPG7-205ENST00000561945 PMP2P02689 132 aa10.68□□□□□ -0.7
SPG7-205ENST00000561945 CD5P06127 495 aa10.68□□□□□ -0.7
SPG7-205ENST00000561945 SMIM18P0DKX4 95 aa10.68□□□□□ -0.7
SPG7-205ENST00000561945 RPL35AP18077 110 aaKnown RBP10.68□□□□□ -0.7
SPG7-205ENST00000561945 RPS19P39019 145 aaKnown RBP10.68□□□□□ -0.7
SPG7-205ENST00000561945 TAS2R20P59543 309 aa10.68□□□□□ -0.7
SPG7-205ENST00000561945 Q56UQ5 140 aa10.68□□□□□ -0.7
SPG7-205ENST00000561945 APRG1Q8IVJ8 170 aa10.68□□□□□ -0.7
SPG7-205ENST00000561945 OR5H2Q8NGV7 314 aa10.68□□□□□ -0.7
SPG7-205ENST00000561945 PHLDA1Q8WV24 401 aaPredicted RBP10.68□□□□□ -0.7
SPG7-205ENST00000561945 C6orf62Q9GZU0 229 aaPredicted RBP10.68□□□□□ -0.7
SPG7-205ENST00000561945 CSTL1Q9H114 145 aa10.68□□□□□ -0.7
SPG7-205ENST00000561945 MPTX1A8MV57 137 aa10.67□□□□□ -0.7
SPG7-205ENST00000561945 INS-IGF2F8WCM5 200 aa10.67□□□□□ -0.7
SPG7-205ENST00000561945 NUPL2O15504 423 aaKnown RBP10.67□□□□□ -0.7
SPG7-205ENST00000561945 ZNF207O43670 478 aaKnown RBP10.67□□□□□ -0.7
SPG7-205ENST00000561945 IGKV1-39P01597 117 aa10.67□□□□□ -0.7
SPG7-205ENST00000561945 IGKV1D-39P04432 117 aa10.67□□□□□ -0.7
SPG7-205ENST00000561945 MFAP4P55083 255 aa10.67□□□□□ -0.7
SPG7-205ENST00000561945 UCP3P55916 312 aa10.67□□□□□ -0.7
SPG7-205ENST00000561945 PRCDQ00LT1 54 aa10.67□□□□□ -0.7
SPG7-205ENST00000561945 TMEM69Q5SWH9 247 aa10.67□□□□□ -0.7
SPG7-205ENST00000561945 PVRIGQ6DKI7 326 aa10.67□□□□□ -0.7
SPG7-205ENST00000561945 LPCAT3Q6P1A2 487 aa10.67□□□□□ -0.7
SPG7-205ENST00000561945 GPR141Q7Z602 305 aa10.67□□□□□ -0.7
SPG7-205ENST00000561945 RPP25LQ8N5L8 163 aaKnown RBP10.67□□□□□ -0.7
SPG7-205ENST00000561945 UBAC2Q8NBM4 344 aa10.67□□□□□ -0.7
SPG7-205ENST00000561945 GPX8Q8TED1 209 aa10.67□□□□□ -0.7
SPG7-205ENST00000561945 HINT2Q9BX68 163 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms