RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 OR13C7P0DN81 318 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 UGT2B7P16662 529 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 GZMMP51124 257 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 H2BFSP57053 126 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 FOXF1Q12946 379 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 SRSF6Q13247 344 aaKnown RBP2.81□□□□□ -1.96
SMG1-204ENST00000561940 OR5C1Q8NGR4 320 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 TLCD1Q96CP7 247 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 PACRGQ96M98 296 aaPredicted RBP2.81□□□□□ -1.96
SMG1-204ENST00000561940 OR7D2Q96RA2 312 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 SPZ1Q9BXG8 430 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 MROQ9BYG7 248 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 PARVAQ9NVD7 372 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 HSPE1-MOB4S4R3N1 261 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 MYO5AQ9Y4I1 1855 aaKnown RBP2.81□□□□□ -1.96
SMG1-204ENST00000561940 PLXND1Q9Y4D7 1925 aa2.81□□□□□ -1.96
SMG1-204ENST00000561940 ABCA4P78363 2273 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 BIRC5O15392 142 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 STK16O75716 305 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 KCNE1P15382 129 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 ALKAL1Q6UXT8 129 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 Q8N402 240 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 OR2V1Q8NHB1 315 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 ERMNQ8TAM6 284 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 ACY3Q96HD9 319 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 KCTD7Q96MP8 289 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 C20orf166-AS1Q96NR2 134 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 PARVGQ9HBI0 331 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 TAS2R9Q9NYW1 312 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 DNAJC12Q9UKB3 198 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 SPENQ96T58 3664 aaKnown RBP2.8□□□□□ -1.96
SMG1-204ENST00000561940 FLNAP21333 2647 aaKnown RBP2.8□□□□□ -1.96
SMG1-204ENST00000561940 CHD5Q8TDI0 1954 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 PTPRDP23468 1912 aa2.8□□□□□ -1.96
SMG1-204ENST00000561940 PKD1L1Q8TDX9 2849 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 C10orf142B7Z368 130 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 TP53I11O14683 189 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 SLC16A4O15374 487 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 DEXIO95424 95 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 OR4A8P0C604 315 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 IFNGR2P38484 337 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 DEFB109BQ30KR1 87 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 SDIM1Q6ZPB5 146 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 TMPPEQ6ZT21 453 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 FAM19A5Q7Z5A7 132 aaPredicted RBP2.79□□□□□ -1.96
SMG1-204ENST00000561940 ABHD14BQ96IU4 210 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 C1QTNF6Q9BXI9 259 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 NSRP1Q9H0G5 558 aaKnown RBP2.79□□□□□ -1.96
SMG1-204ENST00000561940 ALG5Q9Y673 324 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 U3KQA8 63 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 MYO16Q9Y6X6 1858 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 PKDREJQ9NTG1 2253 aa2.79□□□□□ -1.96
SMG1-204ENST00000561940 ARHGAP32A7KAX9 2087 aa2.78□□□□□ -1.96
SMG1-204ENST00000561940 PDCD11Q14690 1871 aaKnown RBP2.78□□□□□ -1.96
SMG1-204ENST00000561940 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.78□□□□□ -1.961e-7■■□□□ 11.6
SMG1-204ENST00000561940 TINCRA0A1B0GVN0 87 aa2.78□□□□□ -1.96
SMG1-204ENST00000561940 CDK2P24941 298 aa2.78□□□□□ -1.96
SMG1-204ENST00000561940 ATP6V0CP27449 155 aa2.78□□□□□ -1.96
SMG1-204ENST00000561940 OR1E2P47887 323 aa2.78□□□□□ -1.96
SMG1-204ENST00000561940 MAGOHP61326 146 aaKnown RBP2.78□□□□□ -1.96
SMG1-204ENST00000561940 EBPQ15125 230 aaKnown RBP2.78□□□□□ -1.96
SMG1-204ENST00000561940 ACSBG2Q5FVE4 666 aa2.78□□□□□ -1.96
SMG1-204ENST00000561940 OGFRL1Q5TC84 451 aaPredicted RBP2.78□□□□□ -1.96
SMG1-204ENST00000561940 ATP5L2Q7Z4Y8 100 aa2.78□□□□□ -1.96
SMG1-204ENST00000561940 ZCCHC13Q8WW36 166 aaKnown RBP2.78□□□□□ -1.96
SMG1-204ENST00000561940 TIPINQ9BVW5 301 aa2.78□□□□□ -1.96
SMG1-204ENST00000561940 GNB1LQ9BYB4 327 aa2.78□□□□□ -1.96
SMG1-204ENST00000561940 AICDAQ9GZX7 198 aa2.78□□□□□ -1.96
SMG1-204ENST00000561940 MED28Q9H204 178 aa2.78□□□□□ -1.96
SMG1-204ENST00000561940 CXCL16Q9H2A7 254 aa2.78□□□□□ -1.96
SMG1-204ENST00000561940 MS4A6AQ9H2W1 248 aa2.78□□□□□ -1.96
SMG1-204ENST00000561940 C16orf95Q9H693 158 aa2.78□□□□□ -1.96
SMG1-204ENST00000561940 FGFR1OP2Q9NVK5 253 aa2.78□□□□□ -1.96
SMG1-204ENST00000561940 MYLKQ15746 1914 aa2.78□□□□□ -1.97
SMG1-204ENST00000561940 TEX50A0A1B0GTY4 177 aa2.77□□□□□ -1.97
SMG1-204ENST00000561940 F5H768 121 aa2.77□□□□□ -1.97
SMG1-204ENST00000561940 PFDN6O15212 129 aa2.77□□□□□ -1.97
SMG1-204ENST00000561940 DEDDO75618 318 aa2.77□□□□□ -1.97
SMG1-204ENST00000561940 ATP5G1P05496 136 aa2.77□□□□□ -1.97
SMG1-204ENST00000561940 MIPP30301 263 aa2.77□□□□□ -1.97
SMG1-204ENST00000561940 HSPA9P38646 679 aaKnown RBP2.77□□□□□ -1.97
SMG1-204ENST00000561940 CDC34P49427 236 aaPredicted RBP2.77□□□□□ -1.97
SMG1-204ENST00000561940 DAPP51397 102 aa2.77□□□□□ -1.97
SMG1-204ENST00000561940 SLC35A2P78381 396 aa2.77□□□□□ -1.97
SMG1-204ENST00000561940 TMEM267Q0VDI3 215 aaPredicted RBP2.77□□□□□ -1.97
SMG1-204ENST00000561940 MRPL51Q4U2R6 128 aaKnown RBP2.77□□□□□ -1.97
SMG1-204ENST00000561940 DNAAF3Q8N9W5 541 aa2.77□□□□□ -1.97
SMG1-204ENST00000561940 ST6GALNAC3Q8NDV1 305 aa2.77□□□□□ -1.97
SMG1-204ENST00000561940 OR8K1Q8NGG5 319 aa2.77□□□□□ -1.97
SMG1-204ENST00000561940 OR10D3Q8NH80 312 aa2.77□□□□□ -1.97
SMG1-204ENST00000561940 ASB13Q8WXK3 278 aa2.77□□□□□ -1.97
SMG1-204ENST00000561940 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.77□□□□□ -1.97
SMG1-204ENST00000561940 TMBIM1Q969X1 311 aa2.77□□□□□ -1.97
SMG1-204ENST00000561940 CCDC94Q9BW85 323 aaPredicted RBP2.77□□□□□ -1.97
SMG1-204ENST00000561940 MRPL40Q9NQ50 206 aaKnown RBP2.77□□□□□ -1.97
SMG1-204ENST00000561940 MPDZO75970 2070 aa2.77□□□□□ -1.97
SMG1-204ENST00000561940 TRAV8-1A0A0A6YYK1 113 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 LINC00862A6NCI5 91 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 C19orf71A6NCJ1 209 aa2.76□□□□□ -1.97
SMG1-204ENST00000561940 NIPSNAP2O75323 286 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms