RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 ST3GAL6Q9Y274 331 aa6.54□□□□□ -1.36
PALB2-202ENST00000561514 STARD9Q9P2P6 4700 aa6.54□□□□□ -1.36
PALB2-202ENST00000561514 SERTM2A0A1B0GWG4 89 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 IFITM10A6NMD0 228 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 NCBP2LA6PVI3 153 aaKnown RBP6.53□□□□□ -1.36
PALB2-202ENST00000561514 ZNF736B4DX44 427 aaPredicted RBP6.53□□□□□ -1.36
PALB2-202ENST00000561514 C12orf77C9JDV5 145 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 TAAR5O14804 337 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 GEMIN2O14893 280 aaKnown RBP6.53□□□□□ -1.36
PALB2-202ENST00000561514 ARPC1BO15143 372 aaKnown RBP6.53□□□□□ -1.36
PALB2-202ENST00000561514 LANCL1O43813 399 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 OR7C1O76099 320 aaPredicted RBP6.53□□□□□ -1.36
PALB2-202ENST00000561514 YIF1AO95070 293 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 LIMS3P0CW19 117 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 LIMS4P0CW20 117 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 HLA-GP17693 338 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 IGFBP3P17936 291 aaPredicted RBP6.53□□□□□ -1.36
PALB2-202ENST00000561514 SULT1A1P50225 295 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 CRIP2P52943 208 aaPredicted RBP6.53□□□□□ -1.36
PALB2-202ENST00000561514 SCAND1P57086 179 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 UBE2G2P60604 165 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 ACTBP60709 375 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 RPS25P62851 125 aaKnown RBP6.53□□□□□ -1.36
PALB2-202ENST00000561514 LTC4SQ16873 150 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 C19orf54Q5BKX5 351 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 UBE2NLQ5JXB2 153 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 RPL22L1Q6P5R6 122 aaKnown RBP6.53□□□□□ -1.36
PALB2-202ENST00000561514 TCF24Q7RTU0 167 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 MOB3BQ86TA1 216 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 TMEM183AQ8IXX5 376 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 ZNF664Q8N3J9 261 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 LFNGQ8NES3 379 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 GPR148Q8TDV2 347 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 TSEN15Q8WW01 171 aaKnown RBP6.53□□□□□ -1.36
PALB2-202ENST00000561514 PHYHIPQ92561 330 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 TMEM106AQ96A25 262 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 UBE2E2Q96LR5 201 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 VPS25Q9BRG1 176 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 HRASLSQ9HDD0 168 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 DNAJC4Q9NNZ3 241 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 LYRM2Q9NU23 88 aaPredicted RBP6.53□□□□□ -1.36
PALB2-202ENST00000561514 GSKIPQ9P0R6 139 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 HSPB7Q9UBY9 170 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 VAX2Q9UIW0 290 aa6.53□□□□□ -1.36
PALB2-202ENST00000561514 ZNF256Q9Y2P7 627 aaPredicted RBP6.53□□□□□ -1.36
PALB2-202ENST00000561514 LYSTQ99698 3801 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 TRAV1-2A0A0B4J238 106 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 TRBV5-5A0A0J9YX44 114 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 A0A1B0GW64 132 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 ANKRD20A5PA0PJZ0 165 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 B4DEV8 164 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 SDCBPO00560 298 aaPredicted RBP6.52□□□□□ -1.37
PALB2-202ENST00000561514 CA11O75493 328 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 TOMM40O96008 361 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 HLA-DRB1P01911 266 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 GZMBP10144 247 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 FSTP19883 344 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 VDAC1P21796 283 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 ECI1P42126 302 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 ZNF134P52741 427 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 PTTG1IPP53801 180 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 CYCSP99999 105 aaKnown RBP6.52□□□□□ -1.37
PALB2-202ENST00000561514 BSXQ3C1V8 233 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 CT45A1Q5HYN5 189 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 LY6G6FQ5SQ64 297 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 FAM53AQ6NSI3 398 aaPredicted RBP6.52□□□□□ -1.37
PALB2-202ENST00000561514 SFXN4Q6P4A7 337 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 LYPD6Q86Y78 171 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 JAGN1Q8N5M9 183 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 ZNF491Q8N8L2 437 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 OR52I1Q8NGK6 324 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 OR4A4PQ8NGN8 299 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 CT45A3Q8NHU0 189 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 MUC7Q8TAX7 377 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 FCAMRQ8WWV6 532 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 ACY3Q96HD9 319 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 ABHD1Q96SE0 405 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 RNF2Q99496 336 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 GPER1Q99527 375 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 RASL11BQ9BPW5 248 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 C20orf144Q9BQM9 153 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 ATG101Q9BSB4 218 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 PARD6GQ9BYG4 376 aaPredicted RBP6.52□□□□□ -1.37
PALB2-202ENST00000561514 RAB9BQ9NP90 201 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 SLC2A9Q9NRM0 540 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 MBNL3Q9NUK0 354 aaKnown RBP6.52□□□□□ -1.37
PALB2-202ENST00000561514 SMAD5-AS1Q9Y6J3 95 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 CSMD3Q7Z407 3707 aa6.52□□□□□ -1.37
PALB2-202ENST00000561514 A0A1W2PP11 408 aa6.51□□□□□ -1.37
PALB2-202ENST00000561514 FAM90A7PA6NKC0 464 aa6.51□□□□□ -1.37
PALB2-202ENST00000561514 FAM90A23PA8MXZ1 464 aa6.51□□□□□ -1.37
PALB2-202ENST00000561514 SPINT2O43291 252 aa6.51□□□□□ -1.37
PALB2-202ENST00000561514 NDUFA3O95167 84 aa6.51□□□□□ -1.37
PALB2-202ENST00000561514 OR2C1O95371 312 aa6.51□□□□□ -1.37
PALB2-202ENST00000561514 EIF4EP06730 217 aaKnown RBP6.51□□□□□ -1.37
PALB2-202ENST00000561514 SNRPCP09234 159 aaKnown RBP6.51□□□□□ -1.37
PALB2-202ENST00000561514 GTF2F2P13984 249 aa6.51□□□□□ -1.37
PALB2-202ENST00000561514 ZNF93P35789 620 aaPredicted RBP6.51□□□□□ -1.37
PALB2-202ENST00000561514 RPS10P46783 165 aaKnown RBP6.51□□□□□ -1.37
PALB2-202ENST00000561514 SOX2P48431 317 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms