RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 TPTE2P1Q5T6R2 138 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 TMEM42Q69YG0 159 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 DUX4L9Q6RFH8 374 aaPredicted RBP2.35□□□□□ -2.03
HERC1-215ENST00000561436 HEPN1Q6WQI6 88 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 SBSPONQ8IVN8 264 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 CBR4Q8N4T8 237 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 C8orf31Q8N9H6 132 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 ZNF565Q8N9K5 539 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 PROKR2Q8NFJ6 384 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 BPIFCQ8NFQ6 507 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 OR4P4Q8NGL7 312 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 OR4K13Q8NH42 304 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 NDNFQ8TB73 568 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 HAVCR2Q8TDQ0 301 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 GNPDA2Q8TDQ7 276 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 APH1BQ8WW43 257 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 ASB17Q8WXJ9 295 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 TLCD1Q96CP7 247 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 UBE2E2Q96LR5 201 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 ZNF649Q9BS31 505 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 OR52D1Q9H346 318 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 RERGLQ9H628 205 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 LINC00574Q9H8X3 128 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 RPRD1BQ9NQG5 326 aaKnown RBP2.35□□□□□ -2.03
HERC1-215ENST00000561436 IL20Q9NYY1 176 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 RABL2AQ9UBK7 228 aaPredicted RBP2.35□□□□□ -2.03
HERC1-215ENST00000561436 DUX4Q9UBX2 424 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 PSG11Q9UQ72 335 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 SLC22A13Q9Y226 551 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 TMEM14AQ9Y6G1 99 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 COMMD3-BMI1R4GMX3 469 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 TENM1Q9UKZ4 2725 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 ROS1P08922 2347 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 WNK1Q9H4A3 2382 aa2.35□□□□□ -2.03
HERC1-215ENST00000561436 IGLV4-60A0A075B6I1 120 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 IGLV1-50A0A075B6I6 118 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 TRGV10A0A0A0MS01 117 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 PQLC2LA1A4F0 135 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 ZNF850A8MQ14 1090 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 H0Y980 276 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 SMKR1H3BMG3 65 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 FXYD1O00168 92 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 TOR1AO14656 332 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 MPZL2O60487 215 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 GATBO75879 557 aaKnown RBP2.34□□□□□ -2.03
HERC1-215ENST00000561436 DHRS3O75911 302 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 GADD45GO95257 159 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 CYB5AP00167 134 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 NRASP01111 189 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 IGLV3-1P01715 115 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 OR8U9P0C7N5 309 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 ZNF3P17036 446 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 RAB3AP20336 220 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 GPR4P46093 362 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 HAAOP46952 286 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 KCNJ3P48549 501 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 RAB13P51153 203 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 VSNL1P62760 191 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 MADCAM1Q13477 382 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 HLA-DRB5Q30154 266 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 ZNF829Q3KNS6 432 aaPredicted RBP2.34□□□□□ -2.03
HERC1-215ENST00000561436 ABCA11PQ4W5N1 156 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 ORMDL2Q53FV1 153 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 KLHL12Q53G59 568 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 CLVS2Q5SYC1 327 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 TBPL2Q6SJ96 375 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 RASSF6Q6ZTQ3 369 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 SLC35E3Q7Z769 313 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 MED12LQ86YW9 2145 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 SGPP2Q8IWX5 399 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 DYNAPQ8N1N2 210 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 TCTEX1D1Q8N7M0 179 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 ZNF676Q8N7Q3 588 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 C5orf56Q8N8D9 126 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 CYB561D1Q8N8Q1 229 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 OR4D6Q8NGJ1 314 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 OR2K2Q8NGT1 345 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 OR2AE1Q8NHA4 323 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 OTOSQ8NHW6 89 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 MYOZ3Q8TDC0 251 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 FLYWCH2Q96CP2 140 aaKnown RBP2.34□□□□□ -2.03
HERC1-215ENST00000561436 MROQ9BYG7 248 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 ABCG5Q9H222 651 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 PLEKHA1Q9HB21 404 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 CMC2Q9NRP2 79 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 PRO0461Q9UI25 63 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 SLC7A11Q9UPY5 501 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 PSG8Q9UQ74 426 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 ERGIC3Q9Y282 383 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 HILPDAQ9Y5L2 63 aa2.34□□□□□ -2.03
HERC1-215ENST00000561436 EML6Q6ZMW3 1958 aa2.34□□□□□ -2.04
HERC1-215ENST00000561436 A6NDN8 102 aa2.33□□□□□ -2.04
HERC1-215ENST00000561436 ZNF729A6NN14 1252 aaPredicted RBP2.33□□□□□ -2.04
HERC1-215ENST00000561436 RIIAD1A6NNX1 92 aa2.33□□□□□ -2.04
HERC1-215ENST00000561436 I3L521 148 aa2.33□□□□□ -2.04
HERC1-215ENST00000561436 MRASO14807 208 aa2.33□□□□□ -2.04
HERC1-215ENST00000561436 BET1O15155 118 aa2.33□□□□□ -2.04
HERC1-215ENST00000561436 BRI3O95415 125 aa2.33□□□□□ -2.04
HERC1-215ENST00000561436 HBE1P02100 147 aa2.33□□□□□ -2.04
HERC1-215ENST00000561436 HMGN1P05114 100 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms