RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 ZNF660Q6AZW8 331 aaPredicted RBP2.51□□□□□ -2.01
SPG11-225ENST00000561391 OR2T2Q6IF00 324 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 ZNF880Q6PDB4 577 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 HSD17B13Q7Z5P4 300 aaPredicted RBP2.51□□□□□ -2.01
SPG11-225ENST00000561391 COMMD7Q86VX2 200 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 CALHM1Q8IU99 346 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 ZNF695Q8IW36 515 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 BAP18Q8IXM2 172 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 GAPTQ8N292 157 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 STPG2Q8N412 459 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 COMMD1Q8N668 190 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 SUMF2Q8NBJ7 301 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 OR5T2Q8NGG2 359 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 OR10Z1Q8NGY1 313 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 OR2T6Q8NHC8 308 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 KLF14Q8TD94 323 aaPredicted RBP2.51□□□□□ -2.01
SPG11-225ENST00000561391 CD300LFQ8TDQ1 290 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 NEK7Q8TDX7 302 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 DCUN1D4Q92564 292 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 MARC2Q969Z3 335 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 MRGPRFQ96AM1 343 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 GALMQ96C23 342 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 NRIP2Q9BQI9 281 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 RNF126Q9BV68 326 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 ZNF471Q9BX82 626 aaPredicted RBP2.51□□□□□ -2.01
SPG11-225ENST00000561391 GPR61Q9BZJ8 451 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 SLC25A31Q9H0C2 315 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 TMEM222Q9H0R3 208 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 TLNRD1Q9H1K6 362 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 NCOR1P1Q9H4R4 102 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 SCRT2Q9NQ03 307 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 SLC2A9Q9NRM0 540 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 FAM212BQ9NTI7 297 aaPredicted RBP2.51□□□□□ -2.01
SPG11-225ENST00000561391 MTCH1Q9NZJ7 389 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 GSKIPQ9P0R6 139 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 TAAR3PQ9P1P4 343 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 ZMAT5Q9UDW3 170 aaKnown RBP2.51□□□□□ -2.01
SPG11-225ENST00000561391 TRAPPC2LQ9UL33 140 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 RNF150Q9ULK6 438 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 HSPG2P98160 4391 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 TRAV14DV4A0A0A6YYC5 116 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 CENPVL3A0A0U1RRI6 287 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 A0A1B0GVY2 172 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 BTBD17A6NE02 478 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 MFSD2BA6NFX1 497 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 OOEPA6NGQ2 149 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 LRRC30A6NM36 301 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 UMAD1C9J7I0 102 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 H0Y980 276 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.5□□□□□ -2.01
SPG11-225ENST00000561391 WRBO00258 174 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 UBE2CO00762 179 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 HMGB3O15347 200 aaKnown RBP2.5□□□□□ -2.01
SPG11-225ENST00000561391 TIMM8AO60220 97 aaPredicted RBP2.5□□□□□ -2.01
SPG11-225ENST00000561391 SOX15O60248 233 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 MED6O75586 246 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 GAS8-AS1O95177 125 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 IGHV3-13P01766 116 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 NMBP08949 121 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 SEC11BP0C7V7 166 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 CCL2P13500 99 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 IRF2P14316 349 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 ZNF44P15621 663 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 ZNF250P15622 560 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 AADACP22760 399 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 RPL12P30050 165 aaKnown RBP2.5□□□□□ -2.01
SPG11-225ENST00000561391 GNRHRP30968 328 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 GLRXP35754 106 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 NPBWR2P48146 333 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 TAS2R30P59541 319 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 FXYD4P59646 89 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 BPIFB3P59826 476 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 KRTAP10-5P60370 271 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 RAB2AP61019 212 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 CX3CL1P78423 397 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 BAXQ07812 192 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 PSG7Q13046 419 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 IL15RAQ13261 267 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 ZNF266Q14584 549 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 TMEM187Q14656 261 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 HMGN3Q15651 99 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 ANKRD55Q3KP44 614 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 LRRC37A5PQ49AS3 106 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 PHLDA2Q53GA4 152 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 Q6P435 159 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 ZNF497Q6ZNH5 498 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 CENPVQ7Z7K6 275 aaPredicted RBP2.5□□□□□ -2.01
SPG11-225ENST00000561391 SMIM29Q86T20 159 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 MYPOPQ86VE0 399 aaPredicted RBP2.5□□□□□ -2.01
SPG11-225ENST00000561391 FAM219AQ8IW50 185 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 STPG4Q8N801 248 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 UBAC2Q8NBM4 344 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 OR10V1Q8NGI7 309 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 OR5D13Q8NGL4 314 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 OR4C13Q8NGP0 309 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 OR11L1Q8NGX0 322 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 SLC25A40Q8TBP6 338 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 GLYATL2Q8WU03 294 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 HPSE2Q8WWQ2 592 aa2.5□□□□□ -2.01
SPG11-225ENST00000561391 RBPMSQ93062 196 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms