RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 NOTCH3Q9UM47 2321 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 IGLC7A0M8Q6 106 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 A6NHS1 94 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 DBX1A6NMT0 343 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 C15orf61A6NNL5 157 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 CDS2O95674 445 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 LY86O95711 162 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 IGKV1-5P01602 117 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 FGF2P09038 288 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 VAMP1P23763 118 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 UCP1P25874 307 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 SNCAP37840 140 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 CCR6P51684 374 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 FHL3Q13643 280 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 CNPY1Q3B7I2 92 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 SPINK9Q5DT21 86 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 SLC35G3Q8N808 338 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 DEDD2Q8WXF8 326 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 RBPMSQ93062 196 aaKnown RBP6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 CXorf58Q96LI9 332 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 FANCD2OSQ96PS1 177 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 SLC25A21Q9BQT8 299 aaPredicted RBP6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 PLEKHA3Q9HB20 300 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 TMEM14BQ9NUH8 114 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 PRR13Q9NZ81 148 aa6.95□□□□□ -1.3
SNRPA1-214ENST00000560987 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 TRBV7-1A0A0A6YYK4 115 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 IGHV3-21A0A0B4J1V1 117 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 A0A0B4J293 547 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 ZNF320A2RRD8 509 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 NAP1L6A6NFF2 107 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 PPP5D1E7EU14 171 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 ST8SIA3O43173 380 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 GGCTO75223 188 aaKnown RBP6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 OR2C1O95371 312 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 TRBV12-3P01733 135 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 CLEC3BP05452 202 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 INSL3P51460 131 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 SYNJ2BPP57105 145 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 KRTAP10-11P60412 298 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 WT1-ASQ06250 92 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 KLF5Q13887 457 aaPredicted RBP6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 TMEM187Q14656 261 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 FAM209BQ5JX69 171 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 ZNF429Q86V71 674 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 OR1L6Q8NGR2 347 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 MRAPQ8TCY5 172 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 GPR146Q96CH1 333 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 MISP3Q96FF7 219 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 ZC4H2Q9NQZ6 224 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 BATF3Q9NR55 127 aa6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 AURKAIP1Q9NWT8 199 aaPredicted RBP6.94□□□□□ -1.3
SNRPA1-214ENST00000560987 IGLV11-55A0A075B6I3 123 aa6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 NXPH3O95157 252 aa6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 HLA-AP01891 365 aaKnown RBP6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 IL7P13232 177 aa6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 ARL3P36405 182 aa6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 HOXA1P49639 335 aaPredicted RBP6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 SUB1P53999 127 aaKnown RBP eCLIP6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 PRCDQ00LT1 54 aa6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 RBMS2Q15434 407 aaKnown RBP6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 FAM106AQ4KMX7 169 aa6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 TMEM128Q5BJH2 165 aa6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 KPRPQ5T749 579 aaPredicted RBP6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 PLET1Q6UQ28 207 aa6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 FAM219AQ8IW50 185 aa6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 LGI3Q8N145 548 aa6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 CENPSQ8N2Z9 138 aa6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 UBAC2Q8NBM4 344 aa6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 S100ZQ8WXG8 99 aa6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 PINX1Q96BK5 328 aaKnown RBP6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 PEMTQ9UBM1 199 aa6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 CACNG5Q9UF02 275 aa6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 F11RQ9Y624 299 aaKnown RBP6.93□□□□□ -1.3
SNRPA1-214ENST00000560987 PIGBOS1A0A0B4J2F0 54 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 A0A0G2JRQ6 117 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 MFSD2BA6NFX1 497 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 CEBPZOSA8MTT3 80 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 BMPR1BO00238 502 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 SULT1A3P0DMM9 295 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 SULT1A4P0DMN0 295 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 SPCS3P61009 180 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 SRPXP78539 464 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 Q56UQ5 140 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 ACSM6Q6P461 480 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 Q6ZRM9 215 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 LYZL2Q7Z4W2 148 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 OR2C3Q8N628 320 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 OR9G4Q8NGQ1 327 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 LHFPL5Q8TAF8 219 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 IL22RA2Q969J5 263 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 TMEM230Q96A57 120 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 GALNT14Q96FL9 552 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 SDHCQ99643 169 aaPredicted RBP6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 C7orf50Q9BRJ6 194 aaKnown RBP6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 HEYLQ9NQ87 328 aaPredicted RBP6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 TMEM56-RWDD3S4R434 201 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 NOTCH1P46531 2555 aa6.92□□□□□ -1.3
SNRPA1-214ENST00000560987 IGHV3-35A0A0C4DH35 117 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms