RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 HSD17B13Q7Z5P4 300 aaPredicted RBP4.3□□□□□ -1.72
ZEB1-220ENST00000560909 TCTE3Q8IZS6 198 aa4.3□□□□□ -1.72
ZEB1-220ENST00000560909 ZNF114Q8NC26 417 aa4.3□□□□□ -1.72
ZEB1-220ENST00000560909 OR4A16Q8NH70 328 aa4.3□□□□□ -1.72
ZEB1-220ENST00000560909 SGMS2Q8NHU3 365 aa4.3□□□□□ -1.72
ZEB1-220ENST00000560909 ANAPC16Q96DE5 110 aa4.3□□□□□ -1.72
ZEB1-220ENST00000560909 RASL11BQ9BPW5 248 aa4.3□□□□□ -1.72
ZEB1-220ENST00000560909 HSPB9Q9BQS6 159 aa4.3□□□□□ -1.72
ZEB1-220ENST00000560909 NEURL2Q9BR09 285 aa4.3□□□□□ -1.72
ZEB1-220ENST00000560909 RNF126Q9BV68 326 aa4.3□□□□□ -1.72
ZEB1-220ENST00000560909 QTRT1Q9BXR0 403 aaKnown RBP4.3□□□□□ -1.72
ZEB1-220ENST00000560909 ZNF436Q9C0F3 470 aaPredicted RBP4.3□□□□□ -1.72
ZEB1-220ENST00000560909 ZNF702PQ9H963 129 aa4.3□□□□□ -1.72
ZEB1-220ENST00000560909 ZFP57Q9NU63 452 aa4.3□□□□□ -1.72
ZEB1-220ENST00000560909 NSG2Q9Y328 171 aa4.3□□□□□ -1.72
ZEB1-220ENST00000560909 OR51B2Q9Y5P1 312 aa4.3□□□□□ -1.72
ZEB1-220ENST00000560909 FBN1P35555 2871 aaKnown RBP4.29□□□□□ -1.72
ZEB1-220ENST00000560909 TMEM89A2RUT3 159 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 LINC01548A6NM66 108 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 NPIPB5A8MRT5 1133 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 H0YIZ8 118 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 K7EPK0 472 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 GOSR2O14653 212 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 KCNAB3O43448 404 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 TCF21O43680 179 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 MED6O75586 246 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 MPC2O95563 127 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 CA2P00918 260 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 SLC25A4P12235 298 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 MYOD1P15172 320 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 CTRB1P17538 263 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 PSMB6P28072 239 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 PPIFP30405 207 aaKnown RBP4.29□□□□□ -1.72
ZEB1-220ENST00000560909 NKX2-1P43699 371 aaPredicted RBP4.29□□□□□ -1.72
ZEB1-220ENST00000560909 RPL27AP46776 148 aaKnown RBP4.29□□□□□ -1.72
ZEB1-220ENST00000560909 SLURP1P55000 103 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
ZEB1-220ENST00000560909 WT1-ASQ06250 92 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 FXYD3Q14802 87 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 C10orf55Q5SWW7 151 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 CTRB2Q6GPI1 263 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 TMEM65Q6PI78 240 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 Q6ZSV7 163 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 TTC9CQ8N5M4 171 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 OR2C3Q8N628 320 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 RNF152Q8N8N0 203 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 UXS1Q8NBZ7 420 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 TMEM170AQ8WVE7 144 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 PPP1R1CQ8WVI7 109 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 SRSF12Q8WXF0 261 aaKnown RBP4.29□□□□□ -1.72
ZEB1-220ENST00000560909 ARPC1AQ92747 370 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 SMIM8Q96KF7 97 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 CIB3Q96Q77 187 aaPredicted RBP4.29□□□□□ -1.72
ZEB1-220ENST00000560909 RAB40CQ96S21 281 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 PRSS22Q9GZN4 317 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 COMMD5Q9GZQ3 224 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 NPFFR1Q9GZQ6 430 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 SERTAD4Q9NUC0 356 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 RCL1Q9Y2P8 373 aaKnown RBP4.29□□□□□ -1.72
ZEB1-220ENST00000560909 FBXO7Q9Y3I1 522 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 TENM1Q9UKZ4 2725 aa4.29□□□□□ -1.72
ZEB1-220ENST00000560909 DNHD1Q96M86 4753 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 TRAV14DV4A0A0A6YYC5 116 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 TRBV9A0A0B4J1U6 114 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 C13orf42A0A1B0GVH6 325 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 A0A1W2PN81 502 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 C5orf51A6NDU8 294 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 MSGN1A6NI15 193 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 TRIM77I1YAP6 450 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 AP4M1O00189 453 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 ATP6V0E1O15342 81 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 SYNGR2O43760 224 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 TSC22D2O75157 780 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 DEDDO75618 318 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 ACTL6BO94805 426 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 IGHG4P01861 327 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 HKR1P10072 659 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 CHRNA7P36544 502 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 POLR2GP62487 172 aaKnown RBP eCLIP4.28□□□□□ -1.72
ZEB1-220ENST00000560909 FGL1Q08830 312 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 RAB32Q13637 225 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 TNXAQ16473 311 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 C2orf83Q53S99 150 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 Q5BKY6 102 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 TMEM14EPQ6UXP3 125 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 OR1P1Q8NH06 330 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 OR1S1Q8NH92 325 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 RNASE11Q8TAA1 199 aaKnown RBP4.28□□□□□ -1.72
ZEB1-220ENST00000560909 FAM110DQ8TAY7 271 aaPredicted RBP4.28□□□□□ -1.72
ZEB1-220ENST00000560909 MYOZ3Q8TDC0 251 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 RCC1LQ96I51 464 aaKnown RBP4.28□□□□□ -1.72
ZEB1-220ENST00000560909 CLCC1Q96S66 551 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 RBKSQ9H477 322 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 GSKIPQ9P0R6 139 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 DMRT1Q9Y5R6 373 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 WSB1Q9Y6I7 421 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 U3KQ87 197 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 STAB1Q9NY15 2570 aa4.28□□□□□ -1.72
ZEB1-220ENST00000560909 TRAV41A0A0B4J266 112 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms