RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 UCHL3P15374 230 aa0.49□□□□□ -2.33
PSMA4-221ENST00000560842 GUK1Q16774 197 aa0.49□□□□□ -2.33
PSMA4-221ENST00000560842 SFXN4Q6P4A7 337 aa0.49□□□□□ -2.33
PSMA4-221ENST00000560842 TMEM106AQ96A25 262 aa0.49□□□□□ -2.33
PSMA4-221ENST00000560842 OBSCN-AS1Q96MR7 158 aa0.49□□□□□ -2.33
PSMA4-221ENST00000560842 NCOA6Q14686 2063 aaPredicted RBP0.49□□□□□ -2.33
PSMA4-221ENST00000560842 TRBV6-7A0A0A0MS04 114 aa0.48□□□□□ -2.33
PSMA4-221ENST00000560842 INMT-MINDY4F8WBC2 141 aa0.48□□□□□ -2.33
PSMA4-221ENST00000560842 GOLGA6L19H0YKK7 550 aa0.48□□□□□ -2.33
PSMA4-221ENST00000560842 OR5F1O95221 314 aa0.48□□□□□ -2.33
PSMA4-221ENST00000560842 APOEP02649 317 aa0.48□□□□□ -2.33
PSMA4-221ENST00000560842 CTSDP07339 412 aaPredicted RBP0.48□□□□□ -2.33
PSMA4-221ENST00000560842 RAB5BP61020 215 aa0.48□□□□□ -2.33
PSMA4-221ENST00000560842 PDE6HQ13956 83 aa0.48□□□□□ -2.33
PSMA4-221ENST00000560842 Q6ZQT0 140 aa0.48□□□□□ -2.33
PSMA4-221ENST00000560842 AAED1Q7RTV5 226 aa0.48□□□□□ -2.33
PSMA4-221ENST00000560842 C10orf67Q8IYJ2 551 aa0.48□□□□□ -2.33
PSMA4-221ENST00000560842 OR4D11Q8NGI4 311 aa0.48□□□□□ -2.33
PSMA4-221ENST00000560842 DERL1Q9BUN8 251 aa0.48□□□□□ -2.33
PSMA4-221ENST00000560842 TOPBP1Q92547 1522 aa0.48□□□□□ -2.33
PSMA4-221ENST00000560842 CCDC88AQ3V6T2 1871 aa0.48□□□□□ -2.33
PSMA4-221ENST00000560842 TRBV20OR9-2A0A075B6H5 130 aa0.47□□□□□ -2.33
PSMA4-221ENST00000560842 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.47□□□□□ -2.33
PSMA4-221ENST00000560842 A0A0A6YYH2 397 aa0.47□□□□□ -2.33
PSMA4-221ENST00000560842 A6NJ64 397 aa0.47□□□□□ -2.33
PSMA4-221ENST00000560842 HTR1AP08908 422 aa0.47□□□□□ -2.33
PSMA4-221ENST00000560842 EIF2B2P49770 351 aaKnown RBP0.47□□□□□ -2.33
PSMA4-221ENST00000560842 BLVRAP53004 296 aa0.47□□□□□ -2.33
PSMA4-221ENST00000560842 COQ5Q5HYK3 327 aa0.47□□□□□ -2.33
PSMA4-221ENST00000560842 CKLFQ9UBR5 152 aa0.47□□□□□ -2.33
PSMA4-221ENST00000560842 MED12LQ86YW9 2145 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 A0A1B0GV50 99 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 M0QZ92 97 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 M0R2N4 97 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 ACOX3O15254 700 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 FADS1O60427 444 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 IGKV1-5P01602 117 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 IFITM2Q01629 132 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 AADACL3Q5VUY0 350 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 PDPK2PQ6A1A2 396 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 FAM151BQ6UXP7 276 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 ALKAL1Q6UXT8 129 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 Q6ZS49 121 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 C1orf158Q8N1D5 194 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 WFDC11Q8NEX6 87 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 RAB8BQ92930 207 aa0.46□□□□□ -2.34
PSMA4-221ENST00000560842 WDR61Q9GZS3 305 aaKnown RBP0.46□□□□□ -2.34
PSMA4-221ENST00000560842 PIK3R4Q99570 1358 aa0.45□□□□□ -2.34
PSMA4-221ENST00000560842 IGKV1D-42A0A075B6H8 117 aa0.45□□□□□ -2.34
PSMA4-221ENST00000560842 LINC00854A0A1B0GVQ3 168 aa0.45□□□□□ -2.34
PSMA4-221ENST00000560842 C2orf70A6NJV1 201 aa0.45□□□□□ -2.34
PSMA4-221ENST00000560842 H0Y980 276 aa0.45□□□□□ -2.34
PSMA4-221ENST00000560842 SLC16A4O15374 487 aa0.45□□□□□ -2.34
PSMA4-221ENST00000560842 OCM2P0CE71 109 aa0.45□□□□□ -2.34
PSMA4-221ENST00000560842 MIFP14174 115 aa0.45□□□□□ -2.34
PSMA4-221ENST00000560842 FKBP2P26885 142 aaKnown RBP0.45□□□□□ -2.34
PSMA4-221ENST00000560842 BRS3P32247 399 aa0.45□□□□□ -2.34
PSMA4-221ENST00000560842 MRPL30Q8TCC3 161 aaKnown RBP0.45□□□□□ -2.34
PSMA4-221ENST00000560842 ZNF418Q8TF45 676 aaPredicted RBP0.45□□□□□ -2.34
PSMA4-221ENST00000560842 XPNPEP1Q9NQW7 623 aa0.45□□□□□ -2.34
PSMA4-221ENST00000560842 ZFP30Q9Y2G7 519 aa0.45□□□□□ -2.34
PSMA4-221ENST00000560842 MAP3K5Q99683 1374 aa0.45□□□□□ -2.34
PSMA4-221ENST00000560842 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 OR2T1O43869 369 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 OR1I1O60431 355 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 OR5G3P0C626 314 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 HIST1H2BOP23527 126 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 HIST1H2BBP33778 126 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 HIST1H2BDP58876 126 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 HIST1H2BCP62807 126 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 GRK1Q15835 563 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 HIST2H2BEQ16778 126 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 SPANXN3Q5MJ09 141 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.44□□□□□ -2.34
PSMA4-221ENST00000560842 OGFRL1Q5TC84 451 aaPredicted RBP0.44□□□□□ -2.34
PSMA4-221ENST00000560842 RPL22L1Q6P5R6 122 aaKnown RBP0.44□□□□□ -2.34
PSMA4-221ENST00000560842 CD200R1LQ6Q8B3 271 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 LRRC25Q8N386 305 aaPredicted RBP0.44□□□□□ -2.34
PSMA4-221ENST00000560842 OR13C4Q8NGS5 318 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 HIST1H2BHQ93079 126 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 OPTNQ96CV9 577 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 SCGB3A1Q96QR1 104 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 HIST1H2BNQ99877 126 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 HIST1H2BMQ99879 126 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 SLC50A1Q9BRV3 221 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 OR51I1Q9H343 314 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 FAM96AQ9H5X1 160 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 RIC1Q4ADV7 1423 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 C9orf84Q5VXU9 1444 aa0.44□□□□□ -2.34
PSMA4-221ENST00000560842 LRRN3E7EW58 273 aa0.43□□□□□ -2.34
PSMA4-221ENST00000560842 HYPMO75409 117 aa0.43□□□□□ -2.34
PSMA4-221ENST00000560842 ASAH2BP0C7U1 165 aa0.43□□□□□ -2.34
PSMA4-221ENST00000560842 COX6A1P12074 109 aa0.43□□□□□ -2.34
PSMA4-221ENST00000560842 RPS12P25398 132 aaKnown RBP0.43□□□□□ -2.34
PSMA4-221ENST00000560842 PHF13Q86YI8 300 aaPredicted RBP0.43□□□□□ -2.34
PSMA4-221ENST00000560842 MIXL1Q9H2W2 232 aa0.43□□□□□ -2.34
PSMA4-221ENST00000560842 FGFR1OP2Q9NVK5 253 aa0.43□□□□□ -2.34
PSMA4-221ENST00000560842 TP73-AS1Q9UF72 201 aa0.43□□□□□ -2.34
PSMA4-221ENST00000560842 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms