RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 IGKV1-16P04430 117 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 S100A9P06702 114 aaKnown RBP7.88□□□□□ -1.15
RTF1-206ENST00000560447 C1QTNF9P0C862 333 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 CCL3L1P16619 93 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 GCHFRP30047 84 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 MEOX2P50222 304 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 AKR1D1P51857 326 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 TAS2R45P59539 299 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 ERVFRD-1P60508 538 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 SNRPEP62304 92 aaKnown RBP7.88□□□□□ -1.15
RTF1-206ENST00000560447 NHLH1Q02575 133 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 ADIRFQ15847 76 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 ZNF672Q499Z4 452 aaPredicted RBP7.88□□□□□ -1.15
RTF1-206ENST00000560447 MIC13Q5XKP0 118 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 PVRIGQ6DKI7 326 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 LYPD2Q6UXB3 125 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 PQLC2Q6ZP29 291 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 ZFP82Q8N141 532 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 MUC15Q8N387 334 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 C2CD4CQ8TF44 421 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 TMEM190Q8WZ59 177 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 FAM210BQ96KR6 192 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 UHRF2Q96PU4 802 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 TMPRSS5Q9H3S3 457 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 SRD5A3Q9H8P0 318 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 MIOXQ9UGB7 285 aa7.88□□□□□ -1.15
RTF1-206ENST00000560447 TRAV9-1A0A075B6T8 112 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 CCL21O00585 134 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 TYMSP04818 313 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 PFN1P07737 140 aaKnown RBP7.87□□□□□ -1.15
RTF1-206ENST00000560447 CXCL1P09341 107 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 OR5G3P0C626 314 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 LINC00869P0C866 280 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 ARL14EPLP0DKL9 152 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 HOXA5P20719 270 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 RPS16P62249 146 aaKnown RBP7.87□□□□□ -1.15
RTF1-206ENST00000560447 SELENOTP62341 195 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 LCN2P80188 198 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 KIAA0141Q14154 515 aaPredicted RBP7.87□□□□□ -1.15
RTF1-206ENST00000560447 ZNF674Q2M3X9 581 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 ETFRF1Q6IPR1 90 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 KCNIP4Q6PIL6 250 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 MMD2Q8IY49 270 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 ZNF114Q8NC26 417 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 GATAD1Q8WUU5 269 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 NEU4Q8WWR8 484 aaPredicted RBP7.87□□□□□ -1.15
RTF1-206ENST00000560447 RPUSD4Q96CM3 377 aaKnown RBP7.87□□□□□ -1.15
RTF1-206ENST00000560447 SRSF8Q9BRL6 282 aaKnown RBP7.87□□□□□ -1.15
RTF1-206ENST00000560447 RAB1BQ9H0U4 201 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 TECRQ9NZ01 308 aaKnown RBP7.87□□□□□ -1.15
RTF1-206ENST00000560447 FUT9Q9Y231 359 aa7.87□□□□□ -1.15
RTF1-206ENST00000560447 APC2O95996 2303 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 LOC400499M0QZD8 3231 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 CELSR3Q9NYQ7 3312 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 C9JCJ5 164 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 CORTO00230 105 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 GGCTO75223 188 aaKnown RBP7.86□□□□□ -1.15
RTF1-206ENST00000560447 IGLV1-47P01700 117 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 IGLV2-23P01705 113 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 RPL35P42766 123 aaKnown RBP7.86□□□□□ -1.15
RTF1-206ENST00000560447 FABP9Q0Z7S8 132 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 SLC16A13Q7RTY0 426 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 C16orf82Q7Z2V1 217 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 IQCF2Q8IXL9 164 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 ZCCHC24Q8N2G6 241 aaKnown RBP7.86□□□□□ -1.15
RTF1-206ENST00000560447 C11orf42Q8N5U0 333 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 THAP8Q8NA92 274 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 OR8B3Q8NGG8 313 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 OR51G1Q8NGK1 321 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 OR4P4Q8NGL7 312 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 OR1L4Q8NGR5 311 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 OR8B2Q96RD0 313 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 PFDN5Q99471 154 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 HINT2Q9BX68 163 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 PATZ1Q9HBE1 687 aaKnown RBP7.86□□□□□ -1.15
RTF1-206ENST00000560447 ZFHX4Q86UP3 3567 aa7.86□□□□□ -1.15
RTF1-206ENST00000560447 TGIF2-C20orf24A0A0A6YYL0 155 aa7.85□□□□□ -1.15
RTF1-206ENST00000560447 HMGB3O15347 200 aaKnown RBP7.85□□□□□ -1.15
RTF1-206ENST00000560447 EIF3GO75821 320 aaKnown RBP eCLIP7.85□□□□□ -1.15
RTF1-206ENST00000560447 IGFBP2P18065 325 aa7.85□□□□□ -1.15
RTF1-206ENST00000560447 GALR1P47211 349 aa7.85□□□□□ -1.15
RTF1-206ENST00000560447 CDX1P47902 265 aaPredicted RBP7.85□□□□□ -1.15
RTF1-206ENST00000560447 FAM3BP58499 235 aaPredicted RBP7.85□□□□□ -1.15
RTF1-206ENST00000560447 GNB1P62873 340 aa7.85□□□□□ -1.15
RTF1-206ENST00000560447 GAMTQ14353 236 aa7.85□□□□□ -1.15
RTF1-206ENST00000560447 CST9LP1Q5W188 147 aa7.85□□□□□ -1.15
RTF1-206ENST00000560447 ZNF343Q6P1L6 599 aa7.85□□□□□ -1.15
RTF1-206ENST00000560447 ZNF841Q6ZN19 808 aa7.85□□□□□ -1.15
RTF1-206ENST00000560447 LINC01551Q86U37 167 aa7.85□□□□□ -1.15
RTF1-206ENST00000560447 LY6G5BQ8NDX9 201 aa7.85□□□□□ -1.15
RTF1-206ENST00000560447 ABHD5Q8WTS1 349 aa7.85□□□□□ -1.15
RTF1-206ENST00000560447 TIMD4Q96H15 378 aa7.85□□□□□ -1.15
RTF1-206ENST00000560447 C12orf57Q99622 126 aa7.85□□□□□ -1.15
RTF1-206ENST00000560447 CLEC7AQ9BXN2 247 aa7.85□□□□□ -1.15
RTF1-206ENST00000560447 DSPP15924 2871 aaKnown RBP7.85□□□□□ -1.15
RTF1-206ENST00000560447 PTPRQQ9UMZ3 2332 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 ICE1Q9Y2F5 2266 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 IGHV2-26A0A0B4J1V2 119 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 A0A1W2PRE2 83 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 FAM90A27PA6NNH2 459 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms