RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 LHFPL5Q8TAF8 219 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 GPR82Q96P67 336 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 BEX4Q9NWD9 120 aaPredicted RBP11.35□□□□□ -0.59
TRAF3-208ENST00000560371 ZFP30Q9Y2G7 519 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 NCKAP5O14513 1909 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 THBDP07204 575 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 COLCA1Q6ZS62 124 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 PRSS22Q9GZN4 317 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 A0A0G2JK05 382 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 PSMB11A5LHX3 300 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 MT-ND6P03923 174 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 HINT1P49773 126 aaPredicted RBP11.35□□□□□ -0.59
TRAF3-208ENST00000560371 KIR2DL4Q99706 377 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 TM2D1Q9BX74 207 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 GPR61Q9BZJ8 451 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 NEU1Q99519 415 aa11.34□□□□□ -0.59
TRAF3-208ENST00000560371 SPAG8Q99932 426 aaPredicted RBP11.34□□□□□ -0.59
TRAF3-208ENST00000560371 PAM16Q9Y3D7 125 aa11.34□□□□□ -0.59
TRAF3-208ENST00000560371 M0QZK8 103 aa11.34□□□□□ -0.59
TRAF3-208ENST00000560371 NCMAPQ5T1S8 102 aa11.34□□□□□ -0.59
TRAF3-208ENST00000560371 VN1R17PQ8TDU5 208 aa11.34□□□□□ -0.59
TRAF3-208ENST00000560371 ICAM4Q14773 271 aa11.34□□□□□ -0.59
TRAF3-208ENST00000560371 CYP2G1PQ6ZSU1 146 aa11.34□□□□□ -0.59
TRAF3-208ENST00000560371 VDAC2P45880 294 aaPredicted RBP11.34□□□□□ -0.59
TRAF3-208ENST00000560371 OR13A1Q8NGR1 328 aa11.34□□□□□ -0.59
TRAF3-208ENST00000560371 C9JCJ5 164 aa11.34□□□□□ -0.59
TRAF3-208ENST00000560371 CXCL2P19875 107 aa11.34□□□□□ -0.59
TRAF3-208ENST00000560371 TMEM187Q14656 261 aa11.34□□□□□ -0.59
TRAF3-208ENST00000560371 SAPCD1Q5SSQ6 148 aa11.34□□□□□ -0.59
TRAF3-208ENST00000560371 CLEC19AQ6UXS0 136 aa11.34□□□□□ -0.59
TRAF3-208ENST00000560371 TIMP3P35625 211 aa11.34□□□□□ -0.59
TRAF3-208ENST00000560371 CD69Q07108 199 aa11.34□□□□□ -0.59
TRAF3-208ENST00000560371 GEMIN7Q9H840 131 aaKnown RBP11.34□□□□□ -0.59
TRAF3-208ENST00000560371 CA2P00918 260 aa11.33□□□□□ -0.6
TRAF3-208ENST00000560371 CCL3L1P16619 93 aa11.33□□□□□ -0.6
TRAF3-208ENST00000560371 PEMTQ9UBM1 199 aa11.33□□□□□ -0.6
TRAF3-208ENST00000560371 K7ERU9 68 aa11.33□□□□□ -0.6
TRAF3-208ENST00000560371 TSPAN13O95857 204 aa11.33□□□□□ -0.6
TRAF3-208ENST00000560371 HSPB1P04792 205 aaKnown RBP11.33□□□□□ -0.6
TRAF3-208ENST00000560371 ABLIM2Q6H8Q1 611 aa11.33□□□□□ -0.6
TRAF3-208ENST00000560371 CIRBPQ14011 172 aaKnown RBP11.33□□□□□ -0.6
TRAF3-208ENST00000560371 SFRP2Q96HF1 295 aa11.33□□□□□ -0.6
TRAF3-208ENST00000560371 PQLC2LA1A4F0 135 aa11.33□□□□□ -0.6
TRAF3-208ENST00000560371 LYNX1G3V0Z9 82 aa11.33□□□□□ -0.6
TRAF3-208ENST00000560371 NBEAP1P0C6P0 100 aa11.33□□□□□ -0.6
TRAF3-208ENST00000560371 LYNX1P0DP58 116 aa11.33□□□□□ -0.6
TRAF3-208ENST00000560371 PRB3Q04118 309 aaPredicted RBP11.33□□□□□ -0.6
TRAF3-208ENST00000560371 WBP1Q96G27 269 aa11.33□□□□□ -0.6
TRAF3-208ENST00000560371 A6NDN8 102 aa11.32□□□□□ -0.6
TRAF3-208ENST00000560371 HLA-DQA1P01909 254 aa11.32□□□□□ -0.6
TRAF3-208ENST00000560371 FOXF2Q12947 444 aa11.32□□□□□ -0.6
TRAF3-208ENST00000560371 SOX21Q9Y651 276 aaPredicted RBP11.32□□□□□ -0.6
TRAF3-208ENST00000560371 TMEM238LA0A1B0GVL6 79 aa11.32□□□□□ -0.6
TRAF3-208ENST00000560371 A6NJY4 79 aa11.32□□□□□ -0.6
TRAF3-208ENST00000560371 DNAL4O96015 105 aa11.32□□□□□ -0.6
TRAF3-208ENST00000560371 MYOD1P15172 320 aa11.32□□□□□ -0.6
TRAF3-208ENST00000560371 FLVCR1-AS1Q8TAF5 88 aa11.32□□□□□ -0.6
TRAF3-208ENST00000560371 DNLZQ5SXM8 178 aa11.32□□□□□ -0.6
TRAF3-208ENST00000560371 MRPL20Q9BYC9 149 aaKnown RBP11.32□□□□□ -0.6
TRAF3-208ENST00000560371 IGLV3-32A0A0A0MS00 114 aa11.32□□□□□ -0.6
TRAF3-208ENST00000560371 LINC00114Q6XXX2 140 aa11.32□□□□□ -0.6
TRAF3-208ENST00000560371 CITED2Q99967 270 aaPredicted RBP11.32□□□□□ -0.6
TRAF3-208ENST00000560371 KLK15Q9H2R5 256 aa11.32□□□□□ -0.6
TRAF3-208ENST00000560371 IGHV3-11P01762 117 aa11.32□□□□□ -0.6
TRAF3-208ENST00000560371 TTC32Q5I0X7 151 aa11.32□□□□□ -0.6
TRAF3-208ENST00000560371 NPFFO15130 113 aa11.31□□□□□ -0.6
TRAF3-208ENST00000560371 NBR2O15453 112 aa11.31□□□□□ -0.6
TRAF3-208ENST00000560371 SAMD13Q5VXD3 122 aa11.31□□□□□ -0.6
TRAF3-208ENST00000560371 EIF3GO75821 320 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRAF3-208ENST00000560371 IL18BPO95998 194 aa11.31□□□□□ -0.6
TRAF3-208ENST00000560371 C8orf46Q8TAG6 207 aa11.31□□□□□ -0.6
TRAF3-208ENST00000560371 DUX3Q96PT4 197 aa11.31□□□□□ -0.6
TRAF3-208ENST00000560371 SH3BGRL3Q9H299 93 aa11.31□□□□□ -0.6
TRAF3-208ENST00000560371 TMEM133Q9H2Q1 129 aa11.31□□□□□ -0.6
TRAF3-208ENST00000560371 IGHV1-18A0A0C4DH31 117 aa11.31□□□□□ -0.6
TRAF3-208ENST00000560371 DSCR9P59020 149 aa11.31□□□□□ -0.6
TRAF3-208ENST00000560371 C21orf62-AS1Q17RA5 79 aa11.31□□□□□ -0.6
TRAF3-208ENST00000560371 CDX1P47902 265 aaPredicted RBP11.31□□□□□ -0.6
TRAF3-208ENST00000560371 PINLYPA6NC86 204 aa11.31□□□□□ -0.6
TRAF3-208ENST00000560371 TBX6O95947 436 aaPredicted RBP11.31□□□□□ -0.6
TRAF3-208ENST00000560371 TRAV40A0A0B4J280 105 aa11.3□□□□□ -0.6
TRAF3-208ENST00000560371 C17orf98A8MV24 154 aa11.3□□□□□ -0.6
TRAF3-208ENST00000560371 DIRC3C9JPN6 131 aa11.3□□□□□ -0.6
TRAF3-208ENST00000560371 ZNF25P17030 456 aaPredicted RBP11.3□□□□□ -0.6
TRAF3-208ENST00000560371 THSD7BQ9C0I4 1608 aa11.3□□□□□ -0.6
TRAF3-208ENST00000560371 IGHV3OR16-8A0A075B7F1 116 aa11.3□□□□□ -0.6
TRAF3-208ENST00000560371 KLK2P20151 261 aa11.3□□□□□ -0.6
TRAF3-208ENST00000560371 CD24P25063 80 aa11.3□□□□□ -0.6
TRAF3-208ENST00000560371 WDR82Q6UXN9 313 aa11.3□□□□□ -0.6
TRAF3-208ENST00000560371 RNASEH2CQ8TDP1 164 aaKnown RBP11.3□□□□□ -0.6
TRAF3-208ENST00000560371 TSC2P49815 1807 aa11.3□□□□□ -0.6
TRAF3-208ENST00000560371 F12P00748 615 aaPredicted RBP11.3□□□□□ -0.6
TRAF3-208ENST00000560371 COTL1Q14019 142 aa11.3□□□□□ -0.6
TRAF3-208ENST00000560371 IFI27L2Q9H2X8 130 aa11.3□□□□□ -0.6
TRAF3-208ENST00000560371 SUMO2P61956 95 aaKnown RBP11.3□□□□□ -0.6
TRAF3-208ENST00000560371 YPEL1O60688 119 aa11.3□□□□□ -0.6
TRAF3-208ENST00000560371 CD74P04233 296 aa11.3□□□□□ -0.6
TRAF3-208ENST00000560371 YPEL2Q96QA6 119 aa11.3□□□□□ -0.6
TRAF3-208ENST00000560371 NCOA6Q14686 2063 aaPredicted RBP11.3□□□□□ -0.6
TRAF3-208ENST00000560371 GNLYP22749 145 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms