RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 ZNF114Q8NC26 417 aa10.72□□□□□ -0.69
HMBOX1-213ENST00000560269 FAM110DQ8TAY7 271 aaPredicted RBP10.72□□□□□ -0.69
HMBOX1-213ENST00000560269 THAP6Q8TBB0 222 aa10.72□□□□□ -0.69
HMBOX1-213ENST00000560269 SERTAD4Q9NUC0 356 aa10.72□□□□□ -0.69
HMBOX1-213ENST00000560269 MBD2Q9UBB5 411 aa10.72□□□□□ -0.69
HMBOX1-213ENST00000560269 U3KQ87 197 aa10.72□□□□□ -0.69
HMBOX1-213ENST00000560269 G3V318 75 aa10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 SMLR1H3BR10 107 aa10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 TSC22D2O75157 780 aa10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 RNASE2P10153 161 aaKnown RBP10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 PPIFP30405 207 aaKnown RBP10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 ATP5IP56385 69 aaPredicted RBP10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 RPL23AP62750 156 aaKnown RBP10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 CFHR3Q02985 330 aa10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 CD300CQ08708 224 aa10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 ECSCRQ19T08 205 aa10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 TMEM95Q3KNT9 176 aa10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 ARSJQ5FYB0 599 aaPredicted RBP10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 PVRIGQ6DKI7 326 aa10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 SLC24A4Q8NFF2 622 aa10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 OR2T6Q8NHC8 308 aa10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 NOL4LQ96MY1 436 aaPredicted RBP10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 P2RX4Q99571 388 aa10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 LYRM2Q9NU23 88 aaPredicted RBP10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 PSENENQ9NZ42 101 aa10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 LINC00527Q9UJ94 153 aa10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 F11RQ9Y624 299 aaKnown RBP10.71□□□□□ -0.69
HMBOX1-213ENST00000560269 C15orf62A8K5M9 175 aa10.7□□□□□ -0.7
HMBOX1-213ENST00000560269 FBXO24O75426 580 aa10.7□□□□□ -0.7
HMBOX1-213ENST00000560269 REG1AP05451 166 aa10.7□□□□□ -0.7
HMBOX1-213ENST00000560269 SNCAP37840 140 aa10.7□□□□□ -0.7
HMBOX1-213ENST00000560269 P2RY1P47900 373 aa10.7□□□□□ -0.7
HMBOX1-213ENST00000560269 RPP30P78346 268 aaKnown RBP10.7□□□□□ -0.7
HMBOX1-213ENST00000560269 KLK9Q2XQG4 91 aa10.7□□□□□ -0.7
HMBOX1-213ENST00000560269 C2orf83Q53S99 150 aa10.7□□□□□ -0.7
HMBOX1-213ENST00000560269 OR1P1Q8NH06 330 aa10.7□□□□□ -0.7
HMBOX1-213ENST00000560269 TMEM170AQ8WVE7 144 aa10.7□□□□□ -0.7
HMBOX1-213ENST00000560269 TAF15Q92804 592 aaKnown RBP eCLIP10.7□□□□□ -0.7
HMBOX1-213ENST00000560269 GON7Q9BXV9 100 aa10.7□□□□□ -0.7
HMBOX1-213ENST00000560269 WNT10AQ9GZT5 417 aa10.7□□□□□ -0.7
HMBOX1-213ENST00000560269 KLK9Q9UKQ9 250 aa10.7□□□□□ -0.7
HMBOX1-213ENST00000560269 H3BP45 60 aa10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 PFDN1O60925 122 aa10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 BRI3O95415 125 aa10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 IFNA10P01566 189 aa10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 C1QBP02746 253 aa10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 NPY1RP25929 384 aa10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 SUB1P53999 127 aaKnown RBP eCLIP10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 SRSF2Q01130 221 aaKnown RBP10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 SPANXN5Q5MJ07 72 aa10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 TMEM65Q6PI78 240 aa10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 TMEM14EPQ6UXP3 125 aa10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 NOXA1Q86UR1 476 aa10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 OR5T1Q8NG75 326 aa10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 OR1L6Q8NGR2 347 aa10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 DCUN1D4Q92564 292 aa10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 OR4C12Q96R67 309 aa10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 STRAPQ9Y3F4 350 aaKnown RBP10.69□□□□□ -0.7
HMBOX1-213ENST00000560269 TMEM89A2RUT3 159 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 FAM24AA6NFZ4 105 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 H3BUA1 57 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 SOX15O60248 233 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 IGLV1-40P01703 118 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 HKR1P10072 659 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 CAV2P51636 162 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 MFAP2P55001 183 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 C19orf35Q6ZS72 473 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 ZNF546Q86UE3 836 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 TMEM252Q8N6L7 170 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 OR11H4Q8NGC9 324 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 OR4F5Q8NH21 305 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 LINC01006Q8NI28 216 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 FANCD2OSQ96PS1 177 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 DMRT1Q9Y5R6 373 aa10.68□□□□□ -0.7
HMBOX1-213ENST00000560269 IGLV11-55A0A075B6I3 123 aa10.67□□□□□ -0.7
HMBOX1-213ENST00000560269 FXYD6-FXYD2A0A087WZ82 144 aa10.67□□□□□ -0.7
HMBOX1-213ENST00000560269 IGSF23A1L1A6 192 aa10.67□□□□□ -0.7
HMBOX1-213ENST00000560269 PMS2P5A8MQ11 134 aa10.67□□□□□ -0.7
HMBOX1-213ENST00000560269 HMSDA8MTL9 139 aa10.67□□□□□ -0.7
HMBOX1-213ENST00000560269 IGHG4P01861 327 aa10.67□□□□□ -0.7
HMBOX1-213ENST00000560269 HIST1H1BP16401 226 aaKnown RBP10.67□□□□□ -0.7
HMBOX1-213ENST00000560269 SLC35B1P78383 322 aa10.67□□□□□ -0.7
HMBOX1-213ENST00000560269 RNASEH2CQ8TDP1 164 aaKnown RBP10.67□□□□□ -0.7
HMBOX1-213ENST00000560269 WIPF2Q8TF74 440 aaPredicted RBP10.67□□□□□ -0.7
HMBOX1-213ENST00000560269 SLC25A31Q9H0C2 315 aa10.67□□□□□ -0.7
HMBOX1-213ENST00000560269 TNFSF18Q9UNG2 199 aa10.67□□□□□ -0.7
HMBOX1-213ENST00000560269 TRBV9A0A0B4J1U6 114 aa10.66□□□□□ -0.7
HMBOX1-213ENST00000560269 PSMB11A5LHX3 300 aa10.66□□□□□ -0.7
HMBOX1-213ENST00000560269 PRSS46E5RG02 174 aa10.66□□□□□ -0.7
HMBOX1-213ENST00000560269 CORTO00230 105 aa10.66□□□□□ -0.7
HMBOX1-213ENST00000560269 CYB5BO43169 146 aa10.66□□□□□ -0.7
HMBOX1-213ENST00000560269 SCAF4O95104 1147 aaKnown RBP10.66□□□□□ -0.7
HMBOX1-213ENST00000560269 PRH1P02810 166 aa10.66□□□□□ -0.7
HMBOX1-213ENST00000560269 OR8U8P0C7N1 319 aa10.66□□□□□ -0.7
HMBOX1-213ENST00000560269 METTL15P1P0C7V9 234 aa10.66□□□□□ -0.7
HMBOX1-213ENST00000560269 DEFA4P12838 97 aa10.66□□□□□ -0.7
HMBOX1-213ENST00000560269 RPL12P30050 165 aaKnown RBP10.66□□□□□ -0.7
HMBOX1-213ENST00000560269 RAB11AP62491 216 aa10.66□□□□□ -0.7
HMBOX1-213ENST00000560269 ZFP69Q49AA0 526 aa10.66□□□□□ -0.7
HMBOX1-213ENST00000560269 CENPVQ7Z7K6 275 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms