RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 NR2C2APQ86WQ0 139 aa14.33□□□□□ -0.12
RABGGTA-214ENST00000560163 OR10C1Q96KK4 312 aa14.33□□□□□ -0.12
RABGGTA-214ENST00000560163 QTRT1Q9BXR0 403 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-214ENST00000560163 COMMD5Q9GZQ3 224 aa14.33□□□□□ -0.12
RABGGTA-214ENST00000560163 DCSTAMPQ9H295 470 aa14.33□□□□□ -0.12
RABGGTA-214ENST00000560163 C21orf62Q9NYP8 219 aa14.33□□□□□ -0.12
RABGGTA-214ENST00000560163 TRAV10A0A0B4J240 114 aa14.32□□□□□ -0.12
RABGGTA-214ENST00000560163 H3BMQ9 156 aa14.32□□□□□ -0.12
RABGGTA-214ENST00000560163 RBFOX2O43251 390 aaKnown RBP eCLIP14.32□□□□□ -0.12
RABGGTA-214ENST00000560163 GIG44P09565 113 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-214ENST00000560163 TAS2R31P59538 309 aa14.32□□□□□ -0.12
RABGGTA-214ENST00000560163 CDNFQ49AH0 187 aa14.32□□□□□ -0.12
RABGGTA-214ENST00000560163 PVRIGQ6DKI7 326 aa14.32□□□□□ -0.12
RABGGTA-214ENST00000560163 SLC25A24Q6NUK1 477 aa14.32□□□□□ -0.12
RABGGTA-214ENST00000560163 SPAG16Q8N0X2 631 aa14.32□□□□□ -0.12
RABGGTA-214ENST00000560163 POM121L12Q8N7R1 296 aa14.32□□□□□ -0.12
RABGGTA-214ENST00000560163 TMEM116Q8NCL8 245 aa14.32□□□□□ -0.12
RABGGTA-214ENST00000560163 RNF126Q9BV68 326 aa14.32□□□□□ -0.12
RABGGTA-214ENST00000560163 TXNL4BQ9NX01 149 aaKnown RBP14.32□□□□□ -0.12
RABGGTA-214ENST00000560163 IGHV3-21A0A0B4J1V1 117 aa14.31□□□□□ -0.12
RABGGTA-214ENST00000560163 IGHV4-28A0A0C4DH34 117 aa14.31□□□□□ -0.12
RABGGTA-214ENST00000560163 METTL21EPA6NDL7 271 aa14.31□□□□□ -0.12
RABGGTA-214ENST00000560163 IFITM5A6NNB3 132 aa14.31□□□□□ -0.12
RABGGTA-214ENST00000560163 K7EIM0 57 aa14.31□□□□□ -0.12
RABGGTA-214ENST00000560163 CYB5BO43169 146 aa14.31□□□□□ -0.12
RABGGTA-214ENST00000560163 OR13C7P0DN81 318 aa14.31□□□□□ -0.12
RABGGTA-214ENST00000560163 OR10A3P58181 314 aa14.31□□□□□ -0.12
RABGGTA-214ENST00000560163 ARL6IP1Q15041 203 aa14.31□□□□□ -0.12
RABGGTA-214ENST00000560163 MSMO1Q15800 293 aa14.31□□□□□ -0.12
RABGGTA-214ENST00000560163 HACD4Q5VWC8 232 aa14.31□□□□□ -0.12
RABGGTA-214ENST00000560163 LOC100506127A0A0U1RQW1 187 aa14.3□□□□□ -0.12
RABGGTA-214ENST00000560163 TNFSF12O43508 249 aa14.3□□□□□ -0.12
RABGGTA-214ENST00000560163 HPRT1P00492 218 aa14.3□□□□□ -0.12
RABGGTA-214ENST00000560163 THOC7Q6I9Y2 204 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-214ENST00000560163 GBGT1Q8N5D6 347 aa14.3□□□□□ -0.12
RABGGTA-214ENST00000560163 CCL28Q9NRJ3 127 aa14.3□□□□□ -0.12
RABGGTA-214ENST00000560163 ANXA10Q9UJ72 324 aa14.3□□□□□ -0.12
RABGGTA-214ENST00000560163 F11RQ9Y624 299 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-214ENST00000560163 IGKV3-7A0A075B6H7 116 aa14.29□□□□□ -0.12
RABGGTA-214ENST00000560163 ELOA3CA0A087WX78 387 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-214ENST00000560163 IGHV3-49A0A0A0MS15 119 aa14.29□□□□□ -0.12
RABGGTA-214ENST00000560163 TEX50A0A1B0GTY4 177 aa14.29□□□□□ -0.12
RABGGTA-214ENST00000560163 CCDC160A6NGH7 325 aa14.29□□□□□ -0.12
RABGGTA-214ENST00000560163 TRAPPC2P0DI81 140 aa14.29□□□□□ -0.12
RABGGTA-214ENST00000560163 TRAPPC2BP0DI82 140 aa14.29□□□□□ -0.12
RABGGTA-214ENST00000560163 NQO2P16083 231 aa14.29□□□□□ -0.12
RABGGTA-214ENST00000560163 LGALS9BQ3B8N2 356 aa14.29□□□□□ -0.12
RABGGTA-214ENST00000560163 C22orf42Q6IC83 251 aa14.29□□□□□ -0.12
RABGGTA-214ENST00000560163 HSD17B13Q7Z5P4 300 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-214ENST00000560163 NDUFA4L2Q9NRX3 87 aa14.29□□□□□ -0.12
RABGGTA-214ENST00000560163 TMEM140Q9NV12 185 aa14.29□□□□□ -0.12
RABGGTA-214ENST00000560163 TRAV1-2A0A0B4J238 106 aa14.28□□□□□ -0.12
RABGGTA-214ENST00000560163 ZNF705EA8MWA4 302 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-214ENST00000560163 M0R2N4 97 aa14.28□□□□□ -0.12
RABGGTA-214ENST00000560163 SULT1C2O00338 296 aa14.28□□□□□ -0.12
RABGGTA-214ENST00000560163 AMBPP02760 352 aa14.28□□□□□ -0.12
RABGGTA-214ENST00000560163 MIFP14174 115 aa14.28□□□□□ -0.12
RABGGTA-214ENST00000560163 VBP1P61758 197 aa14.28□□□□□ -0.12
RABGGTA-214ENST00000560163 NCS1P62166 190 aa14.28□□□□□ -0.12
RABGGTA-214ENST00000560163 ZNF575Q86XF7 245 aa14.28□□□□□ -0.12
RABGGTA-214ENST00000560163 UBAC2Q8NBM4 344 aa14.28□□□□□ -0.12
RABGGTA-214ENST00000560163 NUDCD2Q8WVJ2 157 aa14.28□□□□□ -0.12
RABGGTA-214ENST00000560163 ATG5Q9H1Y0 275 aa14.28□□□□□ -0.12
RABGGTA-214ENST00000560163 X6R8D5 127 aa14.28□□□□□ -0.12
RABGGTA-214ENST00000560163 SSX5O60225 188 aa14.27□□□□□ -0.13
RABGGTA-214ENST00000560163 P0DMU3 169 aa14.27□□□□□ -0.13
RABGGTA-214ENST00000560163 FAM231AP0DMU4 169 aa14.27□□□□□ -0.13
RABGGTA-214ENST00000560163 FAM231CP0DMU5 169 aa14.27□□□□□ -0.13
RABGGTA-214ENST00000560163 LEMD1Q68G75 181 aa14.27□□□□□ -0.13
RABGGTA-214ENST00000560163 ZBTB34Q8NCN2 500 aa14.27□□□□□ -0.13
RABGGTA-214ENST00000560163 PLEKHA2Q9HB19 425 aa14.27□□□□□ -0.13
RABGGTA-214ENST00000560163 IGHV3OR16-13A0A075B7E8 117 aa14.26□□□□□ -0.13
RABGGTA-214ENST00000560163 TRAV14DV4A0A0A6YYC5 116 aa14.26□□□□□ -0.13
RABGGTA-214ENST00000560163 IGHV3-74A0A0B4J1X5 117 aa14.26□□□□□ -0.13
RABGGTA-214ENST00000560163 PDCD5O14737 125 aa14.26□□□□□ -0.13
RABGGTA-214ENST00000560163 DFFBO76075 338 aa14.26□□□□□ -0.13
RABGGTA-214ENST00000560163 DEFB131AP59861 70 aa14.26□□□□□ -0.13
RABGGTA-214ENST00000560163 LSM3P62310 102 aaKnown RBP14.26□□□□□ -0.13
RABGGTA-214ENST00000560163 RELQ04864 619 aaPredicted RBP14.26□□□□□ -0.13
RABGGTA-214ENST00000560163 Q56UQ5 140 aa14.26□□□□□ -0.13
RABGGTA-214ENST00000560163 TPRA1Q86W33 373 aa14.26□□□□□ -0.13
RABGGTA-214ENST00000560163 LILRB2Q8N423 598 aa14.26□□□□□ -0.13
RABGGTA-214ENST00000560163 SECTM1Q8WVN6 248 aa14.26□□□□□ -0.13
RABGGTA-214ENST00000560163 CMTM3Q96MX0 182 aa14.26□□□□□ -0.13
RABGGTA-214ENST00000560163 TMEM235A6NFC5 223 aa14.25□□□□□ -0.13
RABGGTA-214ENST00000560163 NUPL2O15504 423 aaKnown RBP14.25□□□□□ -0.13
RABGGTA-214ENST00000560163 MYL9P24844 172 aa14.25□□□□□ -0.13
RABGGTA-214ENST00000560163 PAFAH1B2P68402 229 aa14.25□□□□□ -0.13
RABGGTA-214ENST00000560163 SPCS2Q15005 226 aa14.25□□□□□ -0.13
RABGGTA-214ENST00000560163 Q6ZR54 194 aa14.25□□□□□ -0.13
RABGGTA-214ENST00000560163 TCF24Q7RTU0 167 aa14.25□□□□□ -0.13
RABGGTA-214ENST00000560163 FAM24BQ8N5W8 94 aa14.25□□□□□ -0.13
RABGGTA-214ENST00000560163 OR1L8Q8NGR8 309 aa14.25□□□□□ -0.13
RABGGTA-214ENST00000560163 MS4A6AQ9H2W1 248 aa14.25□□□□□ -0.13
RABGGTA-214ENST00000560163 RNF167Q9H6Y7 350 aa14.25□□□□□ -0.13
RABGGTA-214ENST00000560163 VSIRQ9H7M9 311 aa14.25□□□□□ -0.13
RABGGTA-214ENST00000560163 PLA2G2EQ9NZK7 142 aa14.25□□□□□ -0.13
RABGGTA-214ENST00000560163 HERC1Q15751 4861 aa14.24□□□□□ -0.13
RABGGTA-214ENST00000560163 CD5P06127 495 aa14.24□□□□□ -0.13
RABGGTA-214ENST00000560163 FCGR2CP31995 323 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms