RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 LGI3Q8N145 548 aa12.97□□□□□ -0.33
RPL28-209ENST00000560055 LRTM2Q8N967 370 aa12.97□□□□□ -0.33
RPL28-209ENST00000560055 RNASE11Q8TAA1 199 aaKnown RBP12.97□□□□□ -0.33
RPL28-209ENST00000560055 RCC1LQ96I51 464 aaKnown RBP12.97□□□□□ -0.33
RPL28-209ENST00000560055 INS-IGF2F8WCM5 200 aa12.96□□□□□ -0.33
RPL28-209ENST00000560055 G3V4G9 280 aa12.96□□□□□ -0.33
RPL28-209ENST00000560055 DEFA4P12838 97 aa12.96□□□□□ -0.33
RPL28-209ENST00000560055 ATP5G2Q06055 141 aa12.96□□□□□ -0.33
RPL28-209ENST00000560055 PDLIM3Q53GG5 364 aaPredicted RBP12.96□□□□□ -0.33
RPL28-209ENST00000560055 LYZL2Q7Z4W2 148 aa12.96□□□□□ -0.33
RPL28-209ENST00000560055 OR2C3Q8N628 320 aa12.96□□□□□ -0.33
RPL28-209ENST00000560055 FBXL7Q9UJT9 491 aa12.96□□□□□ -0.33
RPL28-209ENST00000560055 F11RQ9Y624 299 aaKnown RBP12.96□□□□□ -0.33
RPL28-209ENST00000560055 PIGBOS1A0A0B4J2F0 54 aa12.95□□□□□ -0.34
RPL28-209ENST00000560055 DUXBA0A1W2PPF3 345 aa12.95□□□□□ -0.34
RPL28-209ENST00000560055 NDUFB8O95169 186 aa12.95□□□□□ -0.34
RPL28-209ENST00000560055 TRBV12-3P01733 135 aa12.95□□□□□ -0.34
RPL28-209ENST00000560055 IGLL1P15814 213 aa12.95□□□□□ -0.34
RPL28-209ENST00000560055 VAMP1P23763 118 aa12.95□□□□□ -0.34
RPL28-209ENST00000560055 MFAP2P55001 183 aa12.95□□□□□ -0.34
RPL28-209ENST00000560055 IFITM3Q01628 133 aa12.95□□□□□ -0.34
RPL28-209ENST00000560055 ASAH1Q13510 395 aa12.95□□□□□ -0.34
RPL28-209ENST00000560055 EXOSC2Q13868 293 aaKnown RBP12.95□□□□□ -0.34
RPL28-209ENST00000560055 OXLD1Q5BKU9 147 aa12.95□□□□□ -0.34
RPL28-209ENST00000560055 ZNF114Q8NC26 417 aa12.95□□□□□ -0.34
RPL28-209ENST00000560055 OR52E5Q8NH55 327 aa12.95□□□□□ -0.34
RPL28-209ENST00000560055 DPF1Q92782 380 aa12.95□□□□□ -0.34
RPL28-209ENST00000560055 PLEKHA3Q9HB20 300 aa12.95□□□□□ -0.34
RPL28-209ENST00000560055 RANGRFQ9HD47 186 aaPredicted RBP12.95□□□□□ -0.34
RPL28-209ENST00000560055 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.95□□□□□ -0.34
RPL28-209ENST00000560055 PEF1Q9UBV8 284 aaKnown RBP12.95□□□□□ -0.34
RPL28-209ENST00000560055 CACNG5Q9UF02 275 aa12.95□□□□□ -0.34
RPL28-209ENST00000560055 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.94□□□□□ -0.34
RPL28-209ENST00000560055 C9orf170A2RU37 121 aa12.94□□□□□ -0.34
RPL28-209ENST00000560055 ANKRD34BA5PLL1 514 aa12.94□□□□□ -0.34
RPL28-209ENST00000560055 DUS4LO95620 317 aaKnown RBP12.94□□□□□ -0.34
RPL28-209ENST00000560055 IFNA17P01571 189 aa12.94□□□□□ -0.34
RPL28-209ENST00000560055 ANXA7P20073 488 aaKnown RBP12.94□□□□□ -0.34
RPL28-209ENST00000560055 MECP2P51608 486 aaKnown RBP12.94□□□□□ -0.34
RPL28-209ENST00000560055 SLURP1P55000 103 aa12.94□□□□□ -0.34
RPL28-209ENST00000560055 RAB25P57735 213 aa12.94□□□□□ -0.34
RPL28-209ENST00000560055 KPRPQ5T749 579 aaPredicted RBP12.94□□□□□ -0.34
RPL28-209ENST00000560055 OR1P1Q8NH06 330 aa12.94□□□□□ -0.34
RPL28-209ENST00000560055 C20orf85Q9H1P6 137 aa12.94□□□□□ -0.34
RPL28-209ENST00000560055 TCRBP04435 133 aa12.93□□□□□ -0.34
RPL28-209ENST00000560055 OR4E1P0C645 316 aa12.93□□□□□ -0.34
RPL28-209ENST00000560055 HOXD3P31249 432 aaPredicted RBP12.93□□□□□ -0.34
RPL28-209ENST00000560055 SPCS3P61009 180 aa12.93□□□□□ -0.34
RPL28-209ENST00000560055 DHRS2Q13268 280 aa12.93□□□□□ -0.34
RPL28-209ENST00000560055 BEAN1Q3B7T3 259 aa12.93□□□□□ -0.34
RPL28-209ENST00000560055 SPINK9Q5DT21 86 aa12.93□□□□□ -0.34
RPL28-209ENST00000560055 FAM209BQ5JX69 171 aa12.93□□□□□ -0.34
RPL28-209ENST00000560055 C1QL4Q86Z23 238 aa12.93□□□□□ -0.34
RPL28-209ENST00000560055 DCUN1D4Q92564 292 aa12.93□□□□□ -0.34
RPL28-209ENST00000560055 DLX4Q92988 240 aaPredicted RBP12.93□□□□□ -0.34
RPL28-209ENST00000560055 CCDC140Q96MF4 163 aa12.93□□□□□ -0.34
RPL28-209ENST00000560055 PDCD10Q9BUL8 212 aa12.93□□□□□ -0.34
RPL28-209ENST00000560055 THYN1Q9P016 225 aa12.93□□□□□ -0.34
RPL28-209ENST00000560055 MFSD2BA6NFX1 497 aa12.92□□□□□ -0.34
RPL28-209ENST00000560055 CYB5BO43169 146 aa12.92□□□□□ -0.34
RPL28-209ENST00000560055 HLA-AP01891 365 aaKnown RBP12.92□□□□□ -0.34
RPL28-209ENST00000560055 SULT1A3P0DMM9 295 aa12.92□□□□□ -0.34
RPL28-209ENST00000560055 SULT1A4P0DMN0 295 aa12.92□□□□□ -0.34
RPL28-209ENST00000560055 ZP3P21754 424 aa12.92□□□□□ -0.34
RPL28-209ENST00000560055 ERHP84090 104 aaKnown RBP12.92□□□□□ -0.34
RPL28-209ENST00000560055 OR1L6Q8NGR2 347 aa12.92□□□□□ -0.34
RPL28-209ENST00000560055 CXorf58Q96LI9 332 aa12.92□□□□□ -0.34
RPL28-209ENST00000560055 MCRIP2Q9BUT9 160 aaKnown RBP12.92□□□□□ -0.34
RPL28-209ENST00000560055 A0A1B0GU03 582 aa12.91□□□□□ -0.34
RPL28-209ENST00000560055 BMPR1BO00238 502 aa12.91□□□□□ -0.34
RPL28-209ENST00000560055 PITX3O75364 302 aa12.91□□□□□ -0.34
RPL28-209ENST00000560055 SMCO1Q147U7 214 aa12.91□□□□□ -0.34
RPL28-209ENST00000560055 PVRIGQ6DKI7 326 aa12.91□□□□□ -0.34
RPL28-209ENST00000560055 SLC25A24Q6NUK1 477 aa12.91□□□□□ -0.34
RPL28-209ENST00000560055 MZT2BQ6NZ67 158 aa12.91□□□□□ -0.34
RPL28-209ENST00000560055 LYG2Q86SG7 212 aa12.91□□□□□ -0.34
RPL28-209ENST00000560055 VN1R17PQ8TDU5 208 aa12.91□□□□□ -0.34
RPL28-209ENST00000560055 EEF1AKMT3Q96AZ1 226 aa12.91□□□□□ -0.34
RPL28-209ENST00000560055 NUDT15Q9NV35 164 aa12.91□□□□□ -0.34
RPL28-209ENST00000560055 CACFD1Q9UGQ2 172 aa12.91□□□□□ -0.34
RPL28-209ENST00000560055 TMED3Q9Y3Q3 217 aa12.91□□□□□ -0.34
RPL28-209ENST00000560055 S4R3C0 116 aa12.91□□□□□ -0.34
RPL28-209ENST00000560055 TRBV7-1A0A0A6YYK4 115 aa12.9□□□□□ -0.34
RPL28-209ENST00000560055 FAM240BA0A1B0GVZ2 78 aa12.9□□□□□ -0.34
RPL28-209ENST00000560055 K7EIM0 57 aa12.9□□□□□ -0.34
RPL28-209ENST00000560055 OVOL1O14753 267 aa12.9□□□□□ -0.34
RPL28-209ENST00000560055 IGHV3-23P01764 117 aa12.9□□□□□ -0.34
RPL28-209ENST00000560055 SLC25A6P12236 298 aa12.9□□□□□ -0.34
RPL28-209ENST00000560055 HOXA1P49639 335 aaPredicted RBP12.9□□□□□ -0.34
RPL28-209ENST00000560055 KLF5Q13887 457 aaPredicted RBP12.9□□□□□ -0.34
RPL28-209ENST00000560055 BSXQ3C1V8 233 aa12.9□□□□□ -0.34
RPL28-209ENST00000560055 C4orf46Q504U0 113 aa12.9□□□□□ -0.34
RPL28-209ENST00000560055 ZNF502Q8TBZ5 544 aa12.9□□□□□ -0.34
RPL28-209ENST00000560055 GPR61Q9BZJ8 451 aa12.9□□□□□ -0.34
RPL28-209ENST00000560055 HSPB7Q9UBY9 170 aa12.9□□□□□ -0.34
RPL28-209ENST00000560055 TRAV6A0A075B6T7 132 aa12.89□□□□□ -0.35
RPL28-209ENST00000560055 RNASE2P10153 161 aaKnown RBP12.89□□□□□ -0.35
RPL28-209ENST00000560055 TNFRSF9Q07011 255 aa12.89□□□□□ -0.35
RPL28-209ENST00000560055 SEC14L6B5MCN3 397 aa12.88□□□□□ -0.35
RPL28-209ENST00000560055 PPP5D1E7EU14 171 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms