RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 ASB13Q8WXK3 278 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 SMIM8Q96KF7 97 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 FANCD2OSQ96PS1 177 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 JMJD8Q96S16 334 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 P2RX4Q99571 388 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 SRSF8Q9BRL6 282 aaKnown RBP7.34□□□□□ -1.23
HERC1-206ENST00000559996 PDCD10Q9BUL8 212 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 NPFFR1Q9GZQ6 430 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 WSB1Q9Y6I7 421 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 C15orf62A8K5M9 175 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 NPIPB5A8MRT5 1133 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 PRSS46E5RG02 174 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 WRBO00258 174 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 KCNAB3O43448 404 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 CCNKO75909 580 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 NDUFA7O95182 113 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 CNIH1O95406 144 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 SCGB1D2O95969 90 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 IGLV1-40P01703 118 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 REG1AP05451 166 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 OR13C7P0DN81 318 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 IAPPP10997 89 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 SLC25A4P12235 298 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 TAS2R30P59541 319 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 LRRC37A5PQ49AS3 106 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 PRSS54Q6PEW0 395 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 HAPLN4Q86UW8 402 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 TCTE3Q8IZS6 198 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 OR5T1Q8NG75 326 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 BSCL2Q96G97 398 aaPredicted RBP7.33□□□□□ -1.24
HERC1-206ENST00000559996 OR4C12Q96R67 309 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 PARP11Q9NR21 331 aa7.33□□□□□ -1.24
HERC1-206ENST00000559996 LSM5Q9Y4Y9 91 aaKnown RBP7.33□□□□□ -1.24
HERC1-206ENST00000559996 TRBV9A0A0B4J1U6 114 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 TRAV41A0A0B4J266 112 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 A0A1W2PN81 502 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 FAM24AA6NFZ4 105 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 CEBPZOSA8MTT3 80 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 AP4M1O00189 453 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 SSSCA1O60232 199 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 FBXO24O75426 580 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 MED6O75586 246 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 ACTL6BO94805 426 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 BRI3O95415 125 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 CHRNA7P36544 502 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 KRTAP10-3P60369 221 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 TNP2Q05952 138 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 ARL16Q0P5N6 197 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 MLANAQ16655 118 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 C2orf83Q53S99 150 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 UNQ5815/PRO19632Q6UWF5 114 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 TMEM14EPQ6UXP3 125 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 ZNF114Q8NC26 417 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 OR2T35Q8NGX2 323 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 FAM110DQ8TAY7 271 aaPredicted RBP7.32□□□□□ -1.24
HERC1-206ENST00000559996 TMEM68Q96MH6 324 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 RAB40CQ96S21 281 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 HINT2Q9BX68 163 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 KRTAP4-8Q9BYQ9 185 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 KLK15Q9H2R5 256 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 PLEKHA3Q9HB20 300 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 MBD2Q9UBB5 411 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 CACFD1Q9UGQ2 172 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 C2CD3Q4AC94 2353 aa7.32□□□□□ -1.24
HERC1-206ENST00000559996 IGLV11-55A0A075B6I3 123 aa7.31□□□□□ -1.24
HERC1-206ENST00000559996 IGSF23A1L1A6 192 aa7.31□□□□□ -1.24
HERC1-206ENST00000559996 IGHG4P01861 327 aa7.31□□□□□ -1.24
HERC1-206ENST00000559996 PRH1P02810 166 aa7.31□□□□□ -1.24
HERC1-206ENST00000559996 HKR1P10072 659 aa7.31□□□□□ -1.24
HERC1-206ENST00000559996 PROK1P58294 105 aa7.31□□□□□ -1.24
HERC1-206ENST00000559996 ECSCRQ19T08 205 aa7.31□□□□□ -1.24
HERC1-206ENST00000559996 TCTEX1D4Q5JR98 221 aa7.31□□□□□ -1.24
HERC1-206ENST00000559996 TMEM65Q6PI78 240 aa7.31□□□□□ -1.24
HERC1-206ENST00000559996 HSD17B13Q7Z5P4 300 aaPredicted RBP7.31□□□□□ -1.24
HERC1-206ENST00000559996 ZNF329Q86UD4 541 aa7.31□□□□□ -1.24
HERC1-206ENST00000559996 AKAP14Q86UN6 197 aa7.31□□□□□ -1.24
HERC1-206ENST00000559996 TMEM252Q8N6L7 170 aa7.31□□□□□ -1.24
HERC1-206ENST00000559996 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.31□□□□□ -1.24
HERC1-206ENST00000559996 FNDC4Q9H6D8 234 aaPredicted RBP7.31□□□□□ -1.24
HERC1-206ENST00000559996 LYRM2Q9NU23 88 aaPredicted RBP7.31□□□□□ -1.24
HERC1-206ENST00000559996 PSENENQ9NZ42 101 aa7.31□□□□□ -1.24
HERC1-206ENST00000559996 F11RQ9Y624 299 aaKnown RBP7.31□□□□□ -1.24
HERC1-206ENST00000559996 U3KQ87 197 aa7.31□□□□□ -1.24
HERC1-206ENST00000559996 RNF222A6NCQ9 220 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 H3BP45 60 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 I3L2K1 104 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 TSC22D2O75157 780 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 C1QBP02746 253 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 MDKP21741 143 aaPredicted RBP7.3□□□□□ -1.24
HERC1-206ENST00000559996 PSMB8P28062 276 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 HTR2BP41595 481 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 P2RY1P47900 373 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 HOXA1P49639 335 aaPredicted RBP7.3□□□□□ -1.24
HERC1-206ENST00000559996 S100A10P60903 97 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 ERHP84090 104 aaKnown RBP7.3□□□□□ -1.24
HERC1-206ENST00000559996 NHLH2Q02577 135 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 TMEM267Q0VDI3 215 aaPredicted RBP7.3□□□□□ -1.24
HERC1-206ENST00000559996 KRTAP24-1Q3LI83 254 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 SPANXN5Q5MJ07 72 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 LCNL1Q6ZST4 164 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms