RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 EVI2AP22794 236 aa11.77□□□□□ -0.53
CSPG4P12-202ENST00000559989 GNB1LQ9BYB4 327 aa11.77□□□□□ -0.53
CSPG4P12-202ENST00000559989 RNF115Q9Y4L5 304 aa11.77□□□□□ -0.53
CSPG4P12-202ENST00000559989 PDCD11Q14690 1871 aaKnown RBP11.77□□□□□ -0.53
CSPG4P12-202ENST00000559989 CHD3Q12873 2000 aaKnown RBP11.77□□□□□ -0.53
CSPG4P12-202ENST00000559989 CHCHD5Q9BSY4 110 aa11.77□□□□□ -0.53
CSPG4P12-202ENST00000559989 GTSF1LQ9H1H1 148 aa11.77□□□□□ -0.53
CSPG4P12-202ENST00000559989 C1orf122Q6ZSJ8 110 aa11.77□□□□□ -0.53
CSPG4P12-202ENST00000559989 RGPD4Q7Z3J3 1758 aa11.77□□□□□ -0.53
CSPG4P12-202ENST00000559989 COL9A1P20849 921 aa11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 PNKDQ8N490 385 aa11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 RASL10AQ92737 203 aa11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 NRAPQ86VF7 1730 aa11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 TM4SF5O14894 197 aa11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 CCL1P22362 96 aa11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 RHOGP84095 191 aa11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 TMEM170AQ8WVE7 144 aa11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 LEAP2Q969E1 77 aa11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 IFI27L2Q9H2X8 130 aa11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 C5orf66Q9H5L9 145 aa11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 DOCK5Q9H7D0 1870 aa11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 IGHV1-69-2A0A0G2JMI3 117 aa11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 TCTEX1D4Q5JR98 221 aa11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 IGHV3-49A0A0A0MS15 119 aa11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 CEACAM8P31997 349 aaPredicted RBP11.76□□□□□ -0.53
CSPG4P12-202ENST00000559989 IGHV5-10-1A0A0J9YXX1 117 aa11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 SLC50A1Q9BRV3 221 aa11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 IGHV1OR15-9A0A0B4J2B8 117 aa11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 MLNRO43193 412 aa11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 CLEC19AQ6UXS0 136 aa11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 FAM214BQ7L5A3 538 aa11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 MSRB3Q8IXL7 192 aa11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 CARHSP1Q9Y2V2 147 aaKnown RBP11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 DNAJC13O75165 2243 aa11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 MESP2Q0VG99 397 aa11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 TAF1P21675 1872 aa11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 A0A0U1RRA0 63 aa11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 LINC01565O15544 149 aa11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 TRAV41A0A0B4J266 112 aa11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 C21orf62Q9NYP8 219 aa11.75□□□□□ -0.53
CSPG4P12-202ENST00000559989 RCC1LQ96I51 464 aaKnown RBP11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 CHAC1Q9BUX1 264 aa11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 SNHG12Q9BXW3 62 aa11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 PRRC2BQ5JSZ5 2229 aaKnown RBP11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 LILRA1O75019 489 aa11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 VDAC2P45880 294 aaPredicted RBP11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 IFI27L1Q96BM0 104 aa11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 KLHDC2Q9Y2U9 406 aa11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 NOVP48745 357 aa11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 IGHV3-35A0A0C4DH35 117 aa11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 UPK3AO75631 287 aa11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 IGFBP2P18065 325 aa11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 SOCS3O14543 225 aa11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 FAM90A2PQ658T7 463 aa11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 NDUFC2O95298 119 aa11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 GBF1Q92538 1859 aa11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 ALS2Q96Q42 1657 aa11.74□□□□□ -0.53
CSPG4P12-202ENST00000559989 TRAV8-3A0A0A6YYJ7 113 aa11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 ZNF826PQ6ZT77 177 aa11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 CXCL16Q9H2A7 254 aa11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 NANOS3P60323 173 aaKnown RBP11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 ARAP2Q8WZ64 1704 aa11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 ZNF625Q96I27 306 aaPredicted RBP11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 SCN5AQ14524 2016 aa11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 IGHV3OR16-13A0A075B7E8 117 aa11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 IGHV3-74A0A0B4J1X5 117 aa11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 ZP1P60852 638 aa11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 Q6ZS52 159 aa11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 IGKV1D-33P01593 117 aa11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 IGKV1-33P01594 117 aa11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 CMC4P56277 68 aaPredicted RBP11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 NCR2O95944 276 aa11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 OSR1Q8TAX0 266 aaPredicted RBP11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 DRD3P35462 400 aa11.73□□□□□ -0.53
CSPG4P12-202ENST00000559989 PKD1L3Q7Z443 1732 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 TGIF1Q15583 401 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 MCM3APO60318 1980 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 HLA-DQB1P01920 261 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 C1QTNF9P0C862 333 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 CD300EQ496F6 205 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 GLMPQ8WWB7 406 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 PLCH1Q4KWH8 1693 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 A0A087WX48 190 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 GLRXP35754 106 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 TFF3Q07654 80 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 COX14Q96I36 57 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 PPP1R3EQ9H7J1 279 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 B9A039 149 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 SMAD7O15105 426 aaKnown RBP11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 RNASE7Q9H1E1 156 aaKnown RBP11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 IGHV3OR16-10A0A075B7F0 116 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 TRBV5-5A0A0J9YX44 114 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 A0A1W2PRX2 142 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 TEX43Q6ZNM6 134 aa11.72□□□□□ -0.53
CSPG4P12-202ENST00000559989 SRP19P09132 144 aaKnown RBP11.71□□□□□ -0.53
CSPG4P12-202ENST00000559989 ERCC8Q13216 396 aa11.71□□□□□ -0.53
CSPG4P12-202ENST00000559989 TPTE2P1Q5T6R2 138 aa11.71□□□□□ -0.53
CSPG4P12-202ENST00000559989 ITGB4P16144 1822 aa11.71□□□□□ -0.53
CSPG4P12-202ENST00000559989 PEX11BO96011 259 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms