RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 PIGBOS1A0A0B4J2F0 54 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 IZUMO1RA6ND01 250 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 TMEM235A6NFC5 223 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 OR5H14A6NHG9 310 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 MFNGO00587 321 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 SOCS1O15524 211 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 HSPA12AO43301 675 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 TRBV12-3P01733 135 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 CSN3P07498 182 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 SCTP09683 121 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 RRASP10301 218 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 PTHLHP12272 177 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 DTYMKP23919 212 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 ZBTB25P24278 435 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 MC5RP33032 325 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 TMEM50BP56557 158 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 H2BFSP57053 126 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 TPPP2P59282 170 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 FAAP20Q6NZ36 180 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 OR4D10Q8NGI6 311 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 OR13C8Q8NGS7 320 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 LRRC20Q8TCA0 184 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 SCARB1Q8WTV0 552 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 FLYWCH2Q96CP2 140 aaKnown RBP4.4□□□□□ -1.71
USP3-215ENST00000559771 RNF5Q99942 180 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 NMES1Q9C002 83 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 TINAGL1Q9GZM7 467 aaPredicted RBP4.4□□□□□ -1.71
USP3-215ENST00000559771 ZMAT4Q9H898 229 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 METTL1Q9UBP6 276 aaKnown RBP4.4□□□□□ -1.71
USP3-215ENST00000559771 AK3Q9UIJ7 227 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 RNF150Q9ULK6 438 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 KCNK7Q9Y2U2 307 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 WASHC3Q9Y3C0 194 aa4.4□□□□□ -1.71
USP3-215ENST00000559771 FRAS1Q86XX4 4008 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 TRBV6-7A0A0A0MS04 114 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 RPS10-NUDT3A0A1W2PQS6 291 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 C9orf170A2RU37 121 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 SRRM4A7MD48 611 aaKnown RBP4.39□□□□□ -1.71
USP3-215ENST00000559771 H7C2Y5 167 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 GOSR2O14653 212 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 SLC25A17O43808 307 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 TSC22D2O75157 780 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 BRI3O95415 125 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 MPC2O95563 127 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 HLA-AP01891 365 aaKnown RBP4.39□□□□□ -1.71
USP3-215ENST00000559771 TRGV3P03979 118 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 PET100P0DJ07 73 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 GNB3P16520 340 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 HRH1P35367 487 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 CEACAM6P40199 344 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 HLA-DRB3P79483 266 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 TMEM267Q0VDI3 215 aaPredicted RBP4.39□□□□□ -1.71
USP3-215ENST00000559771 EXOSC2Q13868 293 aaKnown RBP4.39□□□□□ -1.71
USP3-215ENST00000559771 FXYD3Q14802 87 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 MOGAT2Q3SYC2 334 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 SCGB2B2Q4G0G5 96 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 PLAC9Q5JTB6 97 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 GSG1LQ6UXU4 331 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 ACOT7LQ6ZUV0 252 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 TMUB2Q71RG4 321 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 ZNF546Q86UE3 836 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 LHFPL1Q86WI0 220 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 CCDC28AQ8IWP9 274 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 EIF4E3Q8N5X7 224 aaKnown RBP4.39□□□□□ -1.71
USP3-215ENST00000559771 OR5T1Q8NG75 326 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 OR5H2Q8NGV7 314 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 COQ8AQ8NI60 647 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 OR4C12Q96R67 309 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 MFFQ9GZY8 342 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 SLC25A32Q9H2D1 315 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 RETNQ9HD89 108 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 Q9N2K0 584 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 GPR132Q9UNW8 380 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 DMRT1Q9Y5R6 373 aa4.39□□□□□ -1.71
USP3-215ENST00000559771 KANTRA0A1W2PQU2 76 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 ZNF785A8K8V0 405 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 KRBOX1C9JBD0 128 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 H3BUA1 57 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 M0QYG6 137 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 ARPC5O15511 151 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 SSX5O60225 188 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 SPDEFO95238 335 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 SFT2D2O95562 160 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 CXCL2P19875 107 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 EDN2P20800 178 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 SYNJ2BPP57105 145 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 EIF5AP63241 154 aaKnown RBP4.38□□□□□ -1.71
USP3-215ENST00000559771 ARFRP1Q13795 201 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 PLGLAQ15195 96 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 ZNF343Q6P1L6 599 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 DHRS11Q6UWP2 260 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 Q6ZS49 121 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 MOB1BQ7L9L4 216 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 TMED4Q7Z7H5 227 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 PDPNQ86YL7 162 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 KCNRGQ8N5I3 272 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 INO80EQ8NBZ0 244 aaPredicted RBP4.38□□□□□ -1.71
USP3-215ENST00000559771 OR5AP2Q8NGF4 316 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 OR52B4Q8NGK2 314 aa4.38□□□□□ -1.71
USP3-215ENST00000559771 OR9G4Q8NGQ1 327 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms