RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 DENND4CQ5VZ89 1909 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 FAM24BQ8N5W8 94 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 EIF4E3Q8N5X7 224 aaKnown RBP2.04□□□□□ -2.08
SPG11-218ENST00000559754 PACRGLQ8N7B6 248 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 OR10P1Q8NGE3 313 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 OR13D1Q8NGV5 346 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 OR10J5Q8NHC4 309 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 CLDND2Q8NHS1 167 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 SKA2Q8WVK7 121 aaPredicted RBP2.04□□□□□ -2.08
SPG11-218ENST00000559754 H1FXQ92522 213 aaKnown RBP2.04□□□□□ -2.08
SPG11-218ENST00000559754 PLEKHB2Q96CS7 222 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 AIF1LQ9BQI0 150 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 ZNF2Q9BSG1 426 aaPredicted RBP2.04□□□□□ -2.08
SPG11-218ENST00000559754 RSPO3Q9BXY4 272 aaPredicted RBP2.04□□□□□ -2.08
SPG11-218ENST00000559754 SETD5Q9C0A6 1442 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 C6orf62Q9GZU0 229 aaPredicted RBP2.04□□□□□ -2.08
SPG11-218ENST00000559754 SPANXA1Q9NS26 97 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 ASF1BQ9NVP2 202 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 YEATS2Q9ULM3 1422 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 GINS2Q9Y248 185 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 CEP152O94986 1710 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 SLIT3O75094 1523 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 UHRF1BP1Q6BDS2 1440 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 IGKV1D-43A0A0B4J1Z2 117 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 TMEM150BA6NC51 233 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 C19orf71A6NCJ1 209 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 COLCA2A8K830 154 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 GGTLC3B5MD39 225 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 E7EQ34 232 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 OR2J2O76002 312 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 APOA2P02652 100 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 HMGN1P05114 100 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 SMIM17P0DL12 118 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 COL8A2P25067 703 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 GLRXP35754 106 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 PIGPP57054 158 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 AP1S1P61966 158 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 HIST1H4AP62805 103 aaKnown RBP2.03□□□□□ -2.08
SPG11-218ENST00000559754 HTR4Q13639 388 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 RHEBQ15382 184 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 TMEM128Q5BJH2 165 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 LYRM7Q5U5X0 104 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 AADACL3Q5VUY0 350 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 ZNF660Q6AZW8 331 aaPredicted RBP2.03□□□□□ -2.08
SPG11-218ENST00000559754 Q8NAQ8 132 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 SMCR5Q8TEV8 140 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 DNAJC30Q96LL9 226 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 IMUPQ9GZP8 106 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 AICDAQ9GZX7 198 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 C16orf95Q9H693 158 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 LRTM1Q9HBL6 345 aa2.03□□□□□ -2.08
SPG11-218ENST00000559754 MCTS1Q9ULC4 181 aaKnown RBP2.03□□□□□ -2.08
SPG11-218ENST00000559754 PRR14LQ5THK1 2151 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 IGHV3-15A0A0B4J1V0 119 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 LOC102725191A0A1B0GVB3 256 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 A0A1W2PRE2 83 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 RIIAD1A6NNX1 92 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 C17orf98A8MV24 154 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 LEPROTO15243 131 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 PIAS1O75925 651 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 CDS2O95674 445 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 DHFRP00374 187 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 TFPTP0C1Z6 253 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 CD24P25063 80 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 RPS11P62280 158 aaKnown RBP eCLIP2.02□□□□□ -2.09
SPG11-218ENST00000559754 ZNF117Q03924 483 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 RPL18Q07020 188 aaKnown RBP2.02□□□□□ -2.09
SPG11-218ENST00000559754 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.02□□□□□ -2.09
SPG11-218ENST00000559754 SAMD13Q5VXD3 122 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 TMEM136Q6ZRR5 245 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 NUP35Q8NFH5 326 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 OR10D4PQ8NGN7 298 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 ZNF675Q8TD23 568 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 MIEN1Q9BRT3 115 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 DERL1Q9BUN8 251 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 DUSP21Q9H596 190 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 TP73-AS1Q9UF72 201 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 AMMECR1Q9Y4X0 333 aaPredicted RBP2.02□□□□□ -2.09
SPG11-218ENST00000559754 HEY1Q9Y5J3 304 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 NUP210LQ5VU65 1888 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 ZNF407Q9C0G0 2248 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 PEG3Q9GZU2 1588 aa2.02□□□□□ -2.09
SPG11-218ENST00000559754 IRGMA1A4Y4 181 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 TMEM235A6NFC5 223 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 FABP5P3A8MUU1 101 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 CLDN25C9JDP6 229 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 KPNA4O00629 521 aaPredicted RBP2.01□□□□□ -2.09
SPG11-218ENST00000559754 CASP1P29466 404 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 XCL1P47992 114 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 DEFA3P59666 94 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 SMCO1Q147U7 214 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 SURF2Q15527 256 aaPredicted RBP2.01□□□□□ -2.09
SPG11-218ENST00000559754 MIAQ16674 131 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 SPANXN3Q5MJ09 141 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 NOXRED1Q6NXP6 359 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 C2orf91Q6ZV80 131 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 CLVS1Q8IUQ0 354 aaPredicted RBP2.01□□□□□ -2.09
SPG11-218ENST00000559754 EXOC3-AS1Q8N2X6 119 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 GRPEL2Q8TAA5 225 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms