RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 CACNA1SQ13698 1873 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 TRGV4A0A0C4DH28 118 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 SPRR5A0A1B0GTR4 108 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 TRAPPC13A5PLN9 417 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 C1orf196B1AJZ1 125 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 TMEM238C9JI98 176 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 C3orf84H3BNL1 204 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 H7C2G1 150 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 CIAO1O76071 339 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 ATG12O94817 140 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 S1PR2O95136 353 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 IFNA1P01562 189 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 C1QAP02745 245 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 SMIM10L2AP0DMW4 78 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 SMIM10L2BP0DMW5 78 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 NFYAP23511 347 aaPredicted RBP1.18□□□□□ -2.22
GABPB1-209ENST00000559100 CASP1P29466 404 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 ZNF90Q03938 601 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 MOGQ16653 247 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 IBA57Q5T440 356 aaKnown RBP1.18□□□□□ -2.22
GABPB1-209ENST00000559100 HCP5Q6MZN7 132 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 DPPA3Q6W0C5 159 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 GOLT1AQ6ZVE7 132 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 SLC36A1Q7Z2H8 476 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 LRRC28Q86X40 367 aaPredicted RBP1.18□□□□□ -2.22
GABPB1-209ENST00000559100 RPP25LQ8N5L8 163 aaKnown RBP1.18□□□□□ -2.22
GABPB1-209ENST00000559100 WFDC11Q8NEX6 87 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 OR13C4Q8NGS5 318 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 OR13C6PQ8NH95 151 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 NEK7Q8TDX7 302 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 H1FXQ92522 213 aaKnown RBP1.18□□□□□ -2.22
GABPB1-209ENST00000559100 SLC7A6Q92536 515 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 SCGB3A1Q96QR1 104 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 DOHHQ9BU89 302 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 PBDC1Q9BVG4 233 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 TVP23BQ9NYZ1 205 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 PSORS1C2Q9UIG4 136 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 CCL26Q9Y258 94 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 ATG2BQ96BY7 2078 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 DICER1Q9UPY3 1922 aaKnown RBP1.18□□□□□ -2.22
GABPB1-209ENST00000559100 SHANK3Q9BYB0 1731 aa1.18□□□□□ -2.22
GABPB1-209ENST00000559100 IGHV3-64A0A075B6Q5 118 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 TRAV7A0A075B6U4 112 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 IGKV1D-43A0A0B4J1Z2 117 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 HMSDA8MTL9 139 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 G3V2T6 193 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 J3QRE1 110 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 J3QRK9 145 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 CST8O60676 142 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 ZNF189O75820 626 aaPredicted RBP1.17□□□□□ -2.22
GABPB1-209ENST00000559100 NDUFC2O95298 119 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 ZNF682O95780 498 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 IGKV1-5P01602 117 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 FABP1P07148 127 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 MSMBP08118 114 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 TRGC1P0CF51 173 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 PEBP1P30086 187 aaKnown RBP1.17□□□□□ -2.22
GABPB1-209ENST00000559100 EVX1P49640 407 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 TAS2R41P59536 307 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 RELAQ04206 551 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 TNFRSF9Q07011 255 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 NDUFA5Q16718 116 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 ZNF181Q2M3W8 571 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 C3orf33Q6P1S2 294 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 TCF24Q7RTU0 167 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 KTN1-AS1Q86SY8 53 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 TRAPPC6BQ86SZ2 158 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 TMEM86AQ8N2M4 240 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 OR11H6Q8NGC7 330 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 FAM172AQ8WUF8 416 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 TMEM106AQ96A25 262 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 GPR146Q96CH1 333 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 DNAJC30Q96LL9 226 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 PRRT1Q99946 306 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 ZNF471Q9BX82 626 aaPredicted RBP1.17□□□□□ -2.22
GABPB1-209ENST00000559100 VCX3BQ9H321 246 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 CENPHQ9H3R5 247 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 TRABDQ9H4I3 376 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 TP73-AS1Q9UF72 201 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 PYCARDQ9ULZ3 195 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 ERGIC3Q9Y282 383 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 ROBO3Q96MS0 1386 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 ITGB4P16144 1822 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 PCF11O94913 1555 aaKnown RBP1.17□□□□□ -2.22
GABPB1-209ENST00000559100 HECW2Q9P2P5 1572 aa1.17□□□□□ -2.22
GABPB1-209ENST00000559100 SHROOM3Q8TF72 1996 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 SDK2Q58EX2 2172 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 TMSB15BA0A087X1C1 80 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 IGHV1-18A0A0C4DH31 117 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 MUC21A0A0G2JKD1 596 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 MUC21A0A140T8X8 626 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 A0A1B0GVG6 124 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 ARRDC5A6NEK1 342 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 TRAPPC2LH3BP13 241 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 PGRMC1O00264 195 aaKnown RBP1.16□□□□□ -2.22
GABPB1-209ENST00000559100 ORC5O43913 435 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 BANF1O75531 89 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 CCL5P13501 91 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 CSRP1P21291 193 aaKnown RBP1.16□□□□□ -2.22
GABPB1-209ENST00000559100 TCTAP57738 103 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms