RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ELLP55199 621 aaPredicted RBP10.04□□□□□ -0.8
VPS18-203ENST00000558855 ERVK-16P61578 105 aa10.04□□□□□ -0.8
VPS18-203ENST00000558855 SPINK9Q5DT21 86 aa10.04□□□□□ -0.8
VPS18-203ENST00000558855 CROCCP3Q8IVE0 287 aa10.04□□□□□ -0.8
VPS18-203ENST00000558855 UBAC2Q8NBM4 344 aa10.04□□□□□ -0.8
VPS18-203ENST00000558855 OR1L6Q8NGR2 347 aa10.04□□□□□ -0.8
VPS18-203ENST00000558855 MARC2Q969Z3 335 aa10.04□□□□□ -0.8
VPS18-203ENST00000558855 MRGPRFQ96AM1 343 aa10.04□□□□□ -0.8
VPS18-203ENST00000558855 C20orf24Q9BUV8 137 aa10.04□□□□□ -0.8
VPS18-203ENST00000558855 C21orf62Q9NYP8 219 aa10.04□□□□□ -0.8
VPS18-203ENST00000558855 UFC1Q9Y3C8 167 aa10.04□□□□□ -0.8
VPS18-203ENST00000558855 A0A087WXM4 84 aa10.03□□□□□ -0.8
VPS18-203ENST00000558855 TRAV25A0A0B4J276 109 aa10.03□□□□□ -0.8
VPS18-203ENST00000558855 I3L2K1 104 aa10.03□□□□□ -0.8
VPS18-203ENST00000558855 TSPAN4O14817 238 aa10.03□□□□□ -0.8
VPS18-203ENST00000558855 SMIM18P0DKX4 95 aa10.03□□□□□ -0.8
VPS18-203ENST00000558855 DEFB135Q30KP9 77 aa10.03□□□□□ -0.8
VPS18-203ENST00000558855 THOC7Q6I9Y2 204 aaKnown RBP10.03□□□□□ -0.8
VPS18-203ENST00000558855 OR2C3Q8N628 320 aa10.03□□□□□ -0.8
VPS18-203ENST00000558855 OR6F1Q8NGZ6 308 aa10.03□□□□□ -0.8
VPS18-203ENST00000558855 BSCL2Q96G97 398 aaPredicted RBP10.03□□□□□ -0.8
VPS18-203ENST00000558855 C5orf66Q9H5L9 145 aa10.03□□□□□ -0.8
VPS18-203ENST00000558855 DAZ1Q9NQZ3 744 aaKnown RBP10.03□□□□□ -0.8
VPS18-203ENST00000558855 IGHV3OR16-13A0A075B7E8 117 aa10.02□□□□□ -0.81
VPS18-203ENST00000558855 IGHV3-74A0A0B4J1X5 117 aa10.02□□□□□ -0.81
VPS18-203ENST00000558855 A0A0J9YWU9 116 aa10.02□□□□□ -0.81
VPS18-203ENST00000558855 NDUFA4O00483 81 aa10.02□□□□□ -0.81
VPS18-203ENST00000558855 IGKV1-5P01602 117 aa10.02□□□□□ -0.81
VPS18-203ENST00000558855 CTSDP07339 412 aaPredicted RBP10.02□□□□□ -0.81
VPS18-203ENST00000558855 P0C879 139 aa10.02□□□□□ -0.81
VPS18-203ENST00000558855 RBPMS2Q6ZRY4 209 aaKnown RBP10.02□□□□□ -0.81
VPS18-203ENST00000558855 CADM3Q8N126 398 aa10.02□□□□□ -0.81
VPS18-203ENST00000558855 IL17DQ8TAD2 202 aa10.02□□□□□ -0.81
VPS18-203ENST00000558855 RNF2Q99496 336 aa10.02□□□□□ -0.81
VPS18-203ENST00000558855 SPAG8Q99932 426 aaPredicted RBP10.02□□□□□ -0.81
VPS18-203ENST00000558855 THYN1Q9P016 225 aa10.02□□□□□ -0.81
VPS18-203ENST00000558855 A0A0G2JRQ6 117 aa10.01□□□□□ -0.81
VPS18-203ENST00000558855 SNAPC5O75971 98 aa10.01□□□□□ -0.81
VPS18-203ENST00000558855 APOA1P02647 267 aa10.01□□□□□ -0.81
VPS18-203ENST00000558855 RPL35AP18077 110 aaKnown RBP10.01□□□□□ -0.81
VPS18-203ENST00000558855 FCGR2BP31994 310 aaPredicted RBP10.01□□□□□ -0.81
VPS18-203ENST00000558855 PMS2P11Q13670 270 aa10.01□□□□□ -0.81
VPS18-203ENST00000558855 Q56UQ5 140 aa10.01□□□□□ -0.81
VPS18-203ENST00000558855 APRG1Q8IVJ8 170 aa10.01□□□□□ -0.81
VPS18-203ENST00000558855 CMTM1Q8IZ96 169 aa10.01□□□□□ -0.81
VPS18-203ENST00000558855 LILRB2Q8N423 598 aa10.01□□□□□ -0.81
VPS18-203ENST00000558855 OR4D10Q8NGI6 311 aa10.01□□□□□ -0.81
VPS18-203ENST00000558855 OR5B3Q8NH48 314 aa10.01□□□□□ -0.81
VPS18-203ENST00000558855 BORCS5Q969J3 196 aa10.01□□□□□ -0.81
VPS18-203ENST00000558855 MISP3Q96FF7 219 aa10.01□□□□□ -0.81
VPS18-203ENST00000558855 TP53RKQ96S44 253 aa10.01□□□□□ -0.81
VPS18-203ENST00000558855 MRPL36Q9P0J6 103 aaKnown RBP10.01□□□□□ -0.81
VPS18-203ENST00000558855 KLK11Q9UBX7 282 aa10.01□□□□□ -0.81
VPS18-203ENST00000558855 PRNDQ9UKY0 176 aa10.01□□□□□ -0.81
VPS18-203ENST00000558855 CHEK1O14757 476 aa10□□□□□ -0.81
VPS18-203ENST00000558855 TNFAIP8O95379 198 aa10□□□□□ -0.81
VPS18-203ENST00000558855 MT-CO2P00403 227 aa10□□□□□ -0.81
VPS18-203ENST00000558855 APOHP02749 345 aaPredicted RBP10□□□□□ -0.81
VPS18-203ENST00000558855 RCVRNP35243 200 aa10□□□□□ -0.81
VPS18-203ENST00000558855 UCP3P55916 312 aa10□□□□□ -0.81
VPS18-203ENST00000558855 PRCDQ00LT1 54 aa10□□□□□ -0.81
VPS18-203ENST00000558855 SPSB3Q6PJ21 355 aa10□□□□□ -0.81
VPS18-203ENST00000558855 HSD17B13Q7Z5P4 300 aaPredicted RBP10□□□□□ -0.81
VPS18-203ENST00000558855 LYG2Q86SG7 212 aa10□□□□□ -0.81
VPS18-203ENST00000558855 LHFPL1Q86WI0 220 aa10□□□□□ -0.81
VPS18-203ENST00000558855 OR1P1Q8NH06 330 aa10□□□□□ -0.81
VPS18-203ENST00000558855 OR52I2Q8NH67 350 aa10□□□□□ -0.81
VPS18-203ENST00000558855 SMPXQ9UHP9 88 aa10□□□□□ -0.81
VPS18-203ENST00000558855 AGRNO00468 2067 aa10□□□□□ -0.81
VPS18-203ENST00000558855 IGKV3-7A0A075B6H7 116 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 IGHV7-4-1A0A0J9YVY3 117 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 K7EMT4 169 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 CD3DP04234 171 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 TFPI2P48307 235 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 TSPAN5P62079 268 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 CTF1Q16619 201 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 ANKRD55Q3KP44 614 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 FAM90A2PQ658T7 463 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 WFDC3Q8IUB2 231 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 ZNF114Q8NC26 417 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 LINC00476Q8WZB0 136 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 OR10C1Q96KK4 312 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 TMEM56Q96MV1 263 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 ABHD1Q96SE0 405 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 MIXL1Q9H2W2 232 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 SCPEP1Q9HB40 452 aa9.99□□□□□ -0.81
VPS18-203ENST00000558855 FAM212BQ9NTI7 297 aaPredicted RBP9.99□□□□□ -0.81
VPS18-203ENST00000558855 A0A0B4J293 547 aa9.98□□□□□ -0.81
VPS18-203ENST00000558855 C15orf62A8K5M9 175 aa9.98□□□□□ -0.81
VPS18-203ENST00000558855 JTBO76095 146 aa9.98□□□□□ -0.81
VPS18-203ENST00000558855 PPP5CP53041 499 aa9.98□□□□□ -0.81
VPS18-203ENST00000558855 H2BFWTQ7Z2G1 175 aa9.98□□□□□ -0.81
VPS18-203ENST00000558855 SLC38A6Q8IZM9 456 aa9.98□□□□□ -0.81
VPS18-203ENST00000558855 FAM24BQ8N5W8 94 aa9.98□□□□□ -0.81
VPS18-203ENST00000558855 PINX1Q96BK5 328 aaKnown RBP9.98□□□□□ -0.81
VPS18-203ENST00000558855 ATP6V0BQ99437 205 aa9.98□□□□□ -0.81
VPS18-203ENST00000558855 RHPN1-AS1Q9BWJ2 59 aa9.98□□□□□ -0.81
VPS18-203ENST00000558855 NXF2Q9GZY0 626 aaKnown RBP9.98□□□□□ -0.81
VPS18-203ENST00000558855 ZFAND3Q9H8U3 227 aa9.98□□□□□ -0.81
VPS18-203ENST00000558855 IGHV3-66A0A0C4DH42 116 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms