RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 PLEKHA3Q9HB20 300 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 PTTG2Q9NZH5 202 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 DMRT1Q9Y5R6 373 aa12.19□□□□□ -0.46
RABGGTA-206ENST00000558649 IGHV3-21A0A0B4J1V1 117 aa12.18□□□□□ -0.46
RABGGTA-206ENST00000558649 MFSD2BA6NFX1 497 aa12.18□□□□□ -0.46
RABGGTA-206ENST00000558649 CYB5BO43169 146 aa12.18□□□□□ -0.46
RABGGTA-206ENST00000558649 SAP30O75446 220 aa12.18□□□□□ -0.46
RABGGTA-206ENST00000558649 HSPE1P61604 102 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-206ENST00000558649 CENPSQ8N2Z9 138 aa12.18□□□□□ -0.46
RABGGTA-206ENST00000558649 EEF1AKMT3Q96AZ1 226 aa12.18□□□□□ -0.46
RABGGTA-206ENST00000558649 BATF3Q9NR55 127 aa12.18□□□□□ -0.46
RABGGTA-206ENST00000558649 F11RQ9Y624 299 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-206ENST00000558649 TMEM56-RWDD3S4R434 201 aa12.18□□□□□ -0.46
RABGGTA-206ENST00000558649 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 BMPR1BO00238 502 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 NXPH3O95157 252 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 HOXA1P49639 335 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 MFAP2P55001 183 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 SYNJ2BPP57105 145 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 KRTAP10-11P60412 298 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 TMEM128Q5BJH2 165 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 CLEC19AQ6UXS0 136 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 Q6ZRM9 215 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 ZNF429Q86V71 674 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 FAM219AQ8IW50 185 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 S100ZQ8WXG8 99 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 GPR146Q96CH1 333 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 CCDC140Q96MF4 163 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 ZC4H2Q9NQZ6 224 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 AURKAIP1Q9NWT8 199 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 THYN1Q9P016 225 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 CACNG5Q9UF02 275 aa12.17□□□□□ -0.46
RABGGTA-206ENST00000558649 NOTCH1P46531 2555 aa12.16□□□□□ -0.46
RABGGTA-206ENST00000558649 NDUFB6O95139 128 aa12.16□□□□□ -0.46
RABGGTA-206ENST00000558649 HLA-AP01891 365 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-206ENST00000558649 BTCP35070 178 aa12.16□□□□□ -0.46
RABGGTA-206ENST00000558649 ARL3P36405 182 aa12.16□□□□□ -0.46
RABGGTA-206ENST00000558649 PPP1R1AQ13522 171 aa12.16□□□□□ -0.46
RABGGTA-206ENST00000558649 LYZL2Q7Z4W2 148 aa12.16□□□□□ -0.46
RABGGTA-206ENST00000558649 LGI3Q8N145 548 aa12.16□□□□□ -0.46
RABGGTA-206ENST00000558649 MISP3Q96FF7 219 aa12.16□□□□□ -0.46
RABGGTA-206ENST00000558649 CXorf58Q96LI9 332 aa12.16□□□□□ -0.46
RABGGTA-206ENST00000558649 C7orf50Q9BRJ6 194 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-206ENST00000558649 ENY2Q9NPA8 101 aa12.16□□□□□ -0.46
RABGGTA-206ENST00000558649 FLVCR2Q9UPI3 526 aa12.16□□□□□ -0.46
RABGGTA-206ENST00000558649 LYRM1O43325 122 aa12.15□□□□□ -0.46
RABGGTA-206ENST00000558649 SRPXP78539 464 aa12.15□□□□□ -0.46
RABGGTA-206ENST00000558649 ERHP84090 104 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-206ENST00000558649 OR2C3Q8N628 320 aa12.15□□□□□ -0.46
RABGGTA-206ENST00000558649 IL22RA2Q969J5 263 aa12.15□□□□□ -0.46
RABGGTA-206ENST00000558649 CCDC32Q9BV29 185 aa12.15□□□□□ -0.46
RABGGTA-206ENST00000558649 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-206ENST00000558649 TRBV7-1A0A0A6YYK4 115 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 PLA2G10O15496 165 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 SULT1A3P0DMM9 295 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 SULT1A4P0DMN0 295 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 GPR183P32249 361 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 EGFEM1PQ0D2K5 195 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 KLF5Q13887 457 aaPredicted RBP12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 KLK9Q2XQG4 91 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 ANKRD55Q3KP44 614 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 ACSM6Q6P461 480 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 LINC00299Q6ZSB3 139 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 HAPLN4Q86UW8 402 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 UBAC2Q8NBM4 344 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 OR1P1Q8NH06 330 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 PINX1Q96BK5 328 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 OR4C12Q96R67 309 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 ELOVL1Q9BW60 279 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 KLK9Q9UKQ9 250 aa12.14□□□□□ -0.47
RABGGTA-206ENST00000558649 A0A0B4J2A0 478 aa12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 WIPF1O43516 503 aa12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 GGCTO75223 188 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 OR2C1O95371 312 aa12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 SFT2D2O95562 160 aa12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 SNCAP37840 140 aa12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 ZNF846Q147U1 533 aa12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 TATDN3Q17R31 274 aa12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 PDLIM3Q53GG5 364 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 FAM209BQ5JX69 171 aa12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 REC114Q7Z4M0 266 aa12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 OR9G4Q8NGQ1 327 aa12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 OR1L6Q8NGR2 347 aa12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 ZNF502Q8TBZ5 544 aa12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 MRAPQ8TCY5 172 aa12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 WDR12Q9GZL7 423 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 SHPKQ9UHJ6 478 aa12.13□□□□□ -0.47
RABGGTA-206ENST00000558649 NOTCH3Q9UM47 2321 aa12.12□□□□□ -0.47
RABGGTA-206ENST00000558649 OR2T8A6NH00 312 aa12.12□□□□□ -0.47
RABGGTA-206ENST00000558649 CEBPZOSA8MTT3 80 aa12.12□□□□□ -0.47
RABGGTA-206ENST00000558649 LY86O95711 162 aa12.12□□□□□ -0.47
RABGGTA-206ENST00000558649 CLEC3BP05452 202 aa12.12□□□□□ -0.47
RABGGTA-206ENST00000558649 ANXA7P20073 488 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-206ENST00000558649 INSL3P51460 131 aa12.12□□□□□ -0.47
RABGGTA-206ENST00000558649 SPCS3P61009 180 aa12.12□□□□□ -0.47
RABGGTA-206ENST00000558649 NMSQ5H8A3 153 aa12.12□□□□□ -0.47
RABGGTA-206ENST00000558649 ZNF114Q8NC26 417 aa12.12□□□□□ -0.47
RABGGTA-206ENST00000558649 VN1R17PQ8TDU5 208 aa12.12□□□□□ -0.47
RABGGTA-206ENST00000558649 IGHV3-35A0A0C4DH35 117 aa12.11□□□□□ -0.47
RABGGTA-206ENST00000558649 K7EIM0 57 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms