RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 MISP3Q96FF7 219 aa6.86□□□□□ -1.31
USP3-208ENST00000558285 RCC1LQ96I51 464 aaKnown RBP6.86□□□□□ -1.31
USP3-208ENST00000558285 HDHD3Q9BSH5 251 aaPredicted RBP6.86□□□□□ -1.31
USP3-208ENST00000558285 OR2D2Q9H210 308 aa6.86□□□□□ -1.31
USP3-208ENST00000558285 RPS10P5Q9NQ39 176 aa6.86□□□□□ -1.31
USP3-208ENST00000558285 SLC35D1Q9NTN3 355 aa6.86□□□□□ -1.31
USP3-208ENST00000558285 NECAP2Q9NVZ3 263 aa6.86□□□□□ -1.31
USP3-208ENST00000558285 OR1A1Q9P1Q5 309 aa6.86□□□□□ -1.31
USP3-208ENST00000558285 CUBNO60494 3623 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 TRAV18A0A075B6X5 111 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 A0A1W2PRX2 142 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 RRHO14718 337 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 PPP1R2P9O14990 202 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 ACTL6BO94805 426 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 RAB3DO95716 219 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 AMY1AP04745 511 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 AMY2AP04746 511 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 TAS2R20P59543 309 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 OR2B8PP59922 312 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 RPL23AP62750 156 aaKnown RBP6.85□□□□□ -1.31
USP3-208ENST00000558285 DLK1P80370 383 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 VMA21Q3ZAQ7 101 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 ZNF695Q8IW36 515 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 ODF3L1Q8IXM7 274 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 FAM71E2Q8N5Q1 922 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 OR52B4Q8NGK2 314 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 SLC25A38Q96DW6 304 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 RRNAD1Q96FB5 475 aaKnown RBP6.85□□□□□ -1.31
USP3-208ENST00000558285 GALNT14Q96FL9 552 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 ABHD14BQ96IU4 210 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 ANXA10Q9UJ72 324 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 OR2W1Q9Y3N9 320 aa6.85□□□□□ -1.31
USP3-208ENST00000558285 TRAV41A0A0B4J266 112 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 C7orf77A4D0Y5 90 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 TMEM235A6NFC5 223 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 A8MWP6 167 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 H0YJW9 148 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 XRCC3O43542 346 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 EIF4EBP3O60516 100 aaPredicted RBP6.84□□□□□ -1.31
USP3-208ENST00000558285 MED6O75586 246 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 CNIH1O95406 144 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 OR4E1P0C645 316 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 CT45A6P0DMU7 189 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 CT45A5P0DMU8 189 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 CT45A7P0DMV0 189 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 MYCNOSP40205 109 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 KIR2DS2P43631 304 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 AKR1C2P52895 323 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 TAS2R46P59540 309 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 AKR1C1Q04828 323 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 MSMO1Q15800 293 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 USF2Q15853 346 aaPredicted RBP6.84□□□□□ -1.31
USP3-208ENST00000558285 MOGAT2Q3SYC2 334 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 RPL39P5Q59GN2 51 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 UTF1Q5T230 341 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 ZBTB34Q8NCN2 500 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 OR4C16Q8NGL9 310 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 LYPD6BQ8NI32 183 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 VSTM2AQ8TAG5 236 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 RNASEH2CQ8TDP1 164 aaKnown RBP6.84□□□□□ -1.31
USP3-208ENST00000558285 WIPF2Q8TF74 440 aaPredicted RBP6.84□□□□□ -1.31
USP3-208ENST00000558285 MAFIPQ8WZ33 124 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 HSD17B10Q99714 261 aaKnown RBP6.84□□□□□ -1.31
USP3-208ENST00000558285 AGMATQ9BSE5 352 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 KLK11Q9UBX7 282 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 GOLT1BQ9Y3E0 138 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 A0A087WWC5 75 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 CXorf65A6NEN9 183 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 NDUFA3O95167 84 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 HERV-K104P61576 105 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 CATR1Q13166 79 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 ZNF260Q3ZCT1 412 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 ZNF329Q86UD4 541 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 H1FOOQ8IZA3 346 aaPredicted RBP6.84□□□□□ -1.31
USP3-208ENST00000558285 ZNF645Q8N7E2 425 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 KLHL30-AS1Q8NEE0 82 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 OSR1Q8TAX0 266 aaPredicted RBP6.84□□□□□ -1.31
USP3-208ENST00000558285 HARBI1Q96MB7 349 aa6.84□□□□□ -1.31
USP3-208ENST00000558285 SH2D7A6NKC9 451 aaPredicted RBP6.83□□□□□ -1.32
USP3-208ENST00000558285 ZNF736B4DX44 427 aaPredicted RBP6.83□□□□□ -1.32
USP3-208ENST00000558285 DLEU1O43261 78 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 IGHG4P01861 327 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 RD3LP0DJH9 198 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 LYL1P12980 280 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 PRSS3P35030 304 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 SULT1A2P50226 295 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 GAMTQ14353 236 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 SURF2Q15527 256 aaPredicted RBP6.83□□□□□ -1.32
USP3-208ENST00000558285 DHRS11Q6UWP2 260 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 BTNL8Q6UX41 500 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 ZNF562Q6V9R5 426 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 ZNF66Q6ZN08 573 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 Q6ZS46 218 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 TMEM229BQ8NBD8 167 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 OR4S2Q8NH73 311 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 CD300LFQ8TDQ1 290 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 PPP1R1CQ8WVI7 109 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 YPEL4Q96NS1 127 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 NMES1Q9C002 83 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 ACTR3CQ9C0K3 210 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms