RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 PIGBOS1A0A0B4J2F0 54 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 CGB1A6NKQ9 187 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 CEBPZOSA8MTT3 80 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 PPP5D1E7EU14 171 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 ST8SIA3O43173 380 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 IGKV1-5P01602 117 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 TRBV12-3P01733 135 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 IL7P13232 177 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 CCR6P51684 374 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 SYNJ2BPP57105 145 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 HSPE1P61604 102 aaKnown RBP6.92□□□□□ -1.3
SPG11-207ENST00000558138 PRCDQ00LT1 54 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 WT1-ASQ06250 92 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 Q56UQ5 140 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 DEFB121Q5J5C9 76 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 ZNF429Q86V71 674 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 SELENOHQ8IZQ5 122 aaKnown RBP6.92□□□□□ -1.3
SPG11-207ENST00000558138 LGI3Q8N145 548 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 DYNLRB2Q8TF09 96 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 S100ZQ8WXG8 99 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 PINX1Q96BK5 328 aaKnown RBP6.92□□□□□ -1.3
SPG11-207ENST00000558138 BATF3Q9NR55 127 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 AURKAIP1Q9NWT8 199 aaPredicted RBP6.92□□□□□ -1.3
SPG11-207ENST00000558138 PEMTQ9UBM1 199 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 CACNG5Q9UF02 275 aa6.92□□□□□ -1.3
SPG11-207ENST00000558138 F11RQ9Y624 299 aaKnown RBP6.92□□□□□ -1.3
SPG11-207ENST00000558138 IGLV11-55A0A075B6I3 123 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.91□□□□□ -1.3
SPG11-207ENST00000558138 TRBV7-1A0A0A6YYK4 115 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 ZNF320A2RRD8 509 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 MFSD2BA6NFX1 497 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 DBX1A6NMT0 343 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 GGCTO75223 188 aaKnown RBP6.91□□□□□ -1.3
SPG11-207ENST00000558138 CDS2O95674 445 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 GPR183P32249 361 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 INSL3P51460 131 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 SUB1P53999 127 aaKnown RBP eCLIP6.91□□□□□ -1.3
SPG11-207ENST00000558138 TMEM187Q14656 261 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 PDLIM3Q53GG5 364 aaPredicted RBP6.91□□□□□ -1.3
SPG11-207ENST00000558138 TMEM128Q5BJH2 165 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 PLET1Q6UQ28 207 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 CADM3Q8N126 398 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 OR1S1Q8NH92 325 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 GLYATL2Q8WU03 294 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 IL22RA2Q969J5 263 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 TMEM230Q96A57 120 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 FANCD2OSQ96PS1 177 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 C7orf50Q9BRJ6 194 aaKnown RBP6.91□□□□□ -1.3
SPG11-207ENST00000558138 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.91□□□□□ -1.3
SPG11-207ENST00000558138 CMYA5Q8N3K9 4069 aa6.91□□□□□ -1.3
SPG11-207ENST00000558138 A0A0B4J293 547 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 A0A0G2JRQ6 117 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 OR2T8A6NH00 312 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 A6NHS1 94 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 OR2C1O95371 312 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 HLA-AP01891 365 aaKnown RBP6.9□□□□□ -1.3
SPG11-207ENST00000558138 CLEC3BP05452 202 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 SULT1A3P0DMM9 295 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 SULT1A4P0DMN0 295 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 DCTN2Q13561 401 aaKnown RBP6.9□□□□□ -1.3
SPG11-207ENST00000558138 FAM106AQ4KMX7 169 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 C4orf46Q504U0 113 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 KPRPQ5T749 579 aaPredicted RBP6.9□□□□□ -1.3
SPG11-207ENST00000558138 OR9G4Q8NGQ1 327 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 OR1P1Q8NH06 330 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 LHFPL5Q8TAF8 219 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 GPR146Q96CH1 333 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 GALNT14Q96FL9 552 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 WDR12Q9GZL7 423 aaKnown RBP6.9□□□□□ -1.3
SPG11-207ENST00000558138 HIPK2Q9H2X6 1198 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 HEYLQ9NQ87 328 aaPredicted RBP6.9□□□□□ -1.3
SPG11-207ENST00000558138 C21orf62Q9NYP8 219 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 PTTG2Q9NZH5 202 aa6.9□□□□□ -1.3
SPG11-207ENST00000558138 A0A0B4J2A0 478 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 IGHV3-35A0A0C4DH35 117 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 BMPR1BO00238 502 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 LYRM1O43325 122 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 WIPF1O43516 503 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 SCGB2A1O75556 95 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 NDUFB6O95139 128 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 SFT2D2O95562 160 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 OPRK1P41145 380 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 KRTAP10-11P60412 298 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 SPCS3P61009 180 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 PPP1R1AQ13522 171 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 KLF5Q13887 457 aaPredicted RBP6.89□□□□□ -1.31
SPG11-207ENST00000558138 ZNF846Q147U1 533 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 SMCO1Q147U7 214 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 MZT2BQ6NZ67 158 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 ACSM6Q6P461 480 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 LYZL2Q7Z4W2 148 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 HAPLN4Q86UW8 402 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 OR2C3Q8N628 320 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 COQ8AQ8NI60 647 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 VN1R17PQ8TDU5 208 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 CCDC140Q96MF4 163 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 PRR25Q96S07 402 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 CCDC32Q9BV29 185 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 GAR1Q9NY12 217 aaKnown RBP6.89□□□□□ -1.31
SPG11-207ENST00000558138 CACFD1Q9UGQ2 172 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms