RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TMEM267Q0VDI3 215 aaPredicted RBP13.33□□□□□ -0.28
SNX1-203ENST00000558040 FAM103A1Q9BTL3 118 aaKnown RBP13.33□□□□□ -0.28
SNX1-203ENST00000558040 PRSS22Q9GZN4 317 aa13.33□□□□□ -0.28
SNX1-203ENST00000558040 TNCP24821 2201 aa13.33□□□□□ -0.28
SNX1-203ENST00000558040 IGSF23A1L1A6 192 aa13.32□□□□□ -0.28
SNX1-203ENST00000558040 C15orf62A8K5M9 175 aa13.32□□□□□ -0.28
SNX1-203ENST00000558040 TRIM77I1YAP6 450 aa13.32□□□□□ -0.28
SNX1-203ENST00000558040 AREGP15514 252 aa13.32□□□□□ -0.28
SNX1-203ENST00000558040 SULT1A1P50225 295 aa13.32□□□□□ -0.28
SNX1-203ENST00000558040 HILS1P60008 231 aa13.32□□□□□ -0.28
SNX1-203ENST00000558040 BLCAPP62952 87 aa13.32□□□□□ -0.28
SNX1-203ENST00000558040 EWSR1Q01844 656 aaKnown RBP eCLIP13.32□□□□□ -0.28
SNX1-203ENST00000558040 BSXQ3C1V8 233 aa13.32□□□□□ -0.28
SNX1-203ENST00000558040 C2orf83Q53S99 150 aa13.32□□□□□ -0.28
SNX1-203ENST00000558040 TMEM14EPQ6UXP3 125 aa13.32□□□□□ -0.28
SNX1-203ENST00000558040 C9orf62Q8N4C0 152 aa13.32□□□□□ -0.28
SNX1-203ENST00000558040 ZNF114Q8NC26 417 aa13.32□□□□□ -0.28
SNX1-203ENST00000558040 DUX5Q96PT3 197 aa13.32□□□□□ -0.28
SNX1-203ENST00000558040 OR4C12Q96R67 309 aa13.32□□□□□ -0.28
SNX1-203ENST00000558040 HSPB11Q9Y547 144 aa13.32□□□□□ -0.28
SNX1-203ENST00000558040 NPIPB5A8MRT5 1133 aa13.31□□□□□ -0.28
SNX1-203ENST00000558040 CYB5BO43169 146 aa13.31□□□□□ -0.28
SNX1-203ENST00000558040 REG1AP05451 166 aa13.31□□□□□ -0.28
SNX1-203ENST00000558040 METTL15P1P0C7V9 234 aa13.31□□□□□ -0.28
SNX1-203ENST00000558040 APELAP0DMC3 54 aa13.31□□□□□ -0.28
SNX1-203ENST00000558040 RNASE2P10153 161 aaKnown RBP13.31□□□□□ -0.28
SNX1-203ENST00000558040 CXCL2P19875 107 aa13.31□□□□□ -0.28
SNX1-203ENST00000558040 CRIP2P52943 208 aaPredicted RBP13.31□□□□□ -0.28
SNX1-203ENST00000558040 RPL15P61313 204 aaKnown RBP13.31□□□□□ -0.28
SNX1-203ENST00000558040 HBG1P69891 147 aa13.31□□□□□ -0.28
SNX1-203ENST00000558040 HBG2P69892 147 aa13.31□□□□□ -0.28
SNX1-203ENST00000558040 KCNRGQ8N5I3 272 aa13.31□□□□□ -0.28
SNX1-203ENST00000558040 LFNGQ8NES3 379 aa13.31□□□□□ -0.28
SNX1-203ENST00000558040 OR1L6Q8NGR2 347 aa13.31□□□□□ -0.28
SNX1-203ENST00000558040 FBXO7Q9Y3I1 522 aa13.31□□□□□ -0.28
SNX1-203ENST00000558040 AP4M1O00189 453 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 CST7O76096 145 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 IFNA4P05014 189 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 IGF1P05019 195 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 RNASE1P07998 156 aaKnown RBP13.3□□□□□ -0.28
SNX1-203ENST00000558040 EGR2P11161 476 aaPredicted RBP13.3□□□□□ -0.28
SNX1-203ENST00000558040 DEFA4P12838 97 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 ECSCRQ19T08 205 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 LGALSLQ3ZCW2 172 aaPredicted RBP13.3□□□□□ -0.28
SNX1-203ENST00000558040 AKIRIN2Q53H80 203 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 ARSJQ5FYB0 599 aaPredicted RBP13.3□□□□□ -0.28
SNX1-203ENST00000558040 UNQ5815/PRO19632Q6UWF5 114 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 ETV3LQ6ZN32 361 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 TTC9CQ8N5M4 171 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 OR10P1Q8NGE3 313 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 OR1P1Q8NH06 330 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 PINX1Q96BK5 328 aaKnown RBP13.3□□□□□ -0.28
SNX1-203ENST00000558040 P2RX4Q99571 388 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 ARL6Q9H0F7 186 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 ESM1Q9NQ30 184 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 ZNF580Q9UK33 172 aa13.3□□□□□ -0.28
SNX1-203ENST00000558040 F11RQ9Y624 299 aaKnown RBP13.3□□□□□ -0.28
SNX1-203ENST00000558040 SONP18583 2426 aaKnown RBP13.3□□□□□ -0.28
SNX1-203ENST00000558040 TRAV41A0A0B4J266 112 aa13.29□□□□□ -0.28
SNX1-203ENST00000558040 CORTO00230 105 aa13.29□□□□□ -0.28
SNX1-203ENST00000558040 TSPAN9O75954 239 aa13.29□□□□□ -0.28
SNX1-203ENST00000558040 CRYGCP07315 174 aa13.29□□□□□ -0.28
SNX1-203ENST00000558040 CTRB1P17538 263 aa13.29□□□□□ -0.28
SNX1-203ENST00000558040 S100A11P31949 105 aa13.29□□□□□ -0.28
SNX1-203ENST00000558040 NHLH2Q02577 135 aa13.29□□□□□ -0.28
SNX1-203ENST00000558040 ASPHD1Q5U4P2 390 aa13.29□□□□□ -0.28
SNX1-203ENST00000558040 CTRB2Q6GPI1 263 aa13.29□□□□□ -0.28
SNX1-203ENST00000558040 OR8G2PQ6IF36 304 aa13.29□□□□□ -0.28
SNX1-203ENST00000558040 TMUB2Q71RG4 321 aa13.29□□□□□ -0.28
SNX1-203ENST00000558040 STPG2Q8N412 459 aa13.29□□□□□ -0.28
SNX1-203ENST00000558040 TMEM217Q8N7C4 229 aa13.29□□□□□ -0.28
SNX1-203ENST00000558040 OR1S2Q8NGQ3 325 aa13.29□□□□□ -0.28
SNX1-203ENST00000558040 KANTRA0A1W2PQU2 76 aa13.28□□□□□ -0.28
SNX1-203ENST00000558040 LINC01548A6NM66 108 aa13.28□□□□□ -0.28
SNX1-203ENST00000558040 TAAR5O14804 337 aa13.28□□□□□ -0.28
SNX1-203ENST00000558040 FBXO24O75426 580 aa13.28□□□□□ -0.28
SNX1-203ENST00000558040 CRYBA1P05813 215 aa13.28□□□□□ -0.28
SNX1-203ENST00000558040 UBA52P62987 128 aaKnown RBP13.28□□□□□ -0.28
SNX1-203ENST00000558040 LAMTOR1Q6IAA8 161 aa13.28□□□□□ -0.28
SNX1-203ENST00000558040 LILRB2Q8N423 598 aa13.28□□□□□ -0.28
SNX1-203ENST00000558040 FAM110DQ8TAY7 271 aaPredicted RBP13.28□□□□□ -0.28
SNX1-203ENST00000558040 RNASEH2CQ8TDP1 164 aaKnown RBP13.28□□□□□ -0.28
SNX1-203ENST00000558040 ARPC5LQ9BPX5 153 aa13.28□□□□□ -0.28
SNX1-203ENST00000558040 WNT10AQ9GZT5 417 aa13.28□□□□□ -0.28
SNX1-203ENST00000558040 PLXNB1O43157 2135 aa13.28□□□□□ -0.28
SNX1-203ENST00000558040 CELSR1Q9NYQ6 3014 aa13.27□□□□□ -0.28
SNX1-203ENST00000558040 FAM181BA6NEQ2 426 aa13.27□□□□□ -0.29
SNX1-203ENST00000558040 BCL2L11O43521 198 aa13.27□□□□□ -0.29
SNX1-203ENST00000558040 TCF21O43680 179 aa13.27□□□□□ -0.29
SNX1-203ENST00000558040 SLC38A11Q08AI6 406 aa13.27□□□□□ -0.29
SNX1-203ENST00000558040 ATP6V1FQ16864 119 aa13.27□□□□□ -0.29
SNX1-203ENST00000558040 OR5C1Q8NGR4 320 aa13.27□□□□□ -0.29
SNX1-203ENST00000558040 TMEM170AQ8WVE7 144 aa13.27□□□□□ -0.29
SNX1-203ENST00000558040 GON7Q9BXV9 100 aa13.27□□□□□ -0.29
SNX1-203ENST00000558040 ZNF702PQ9H963 129 aa13.27□□□□□ -0.29
SNX1-203ENST00000558040 FBXL17Q9UF56 701 aa13.27□□□□□ -0.29
SNX1-203ENST00000558040 SVEP1Q4LDE5 3571 aa13.26□□□□□ -0.29
SNX1-203ENST00000558040 PMS2P5A8MQ11 134 aa13.26□□□□□ -0.29
SNX1-203ENST00000558040 DFFBO76075 338 aa13.26□□□□□ -0.29
SNX1-203ENST00000558040 HIST1H1BP16401 226 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 215.3 ms