RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 DUX3Q96PT4 197 aa12.96□□□□□ -0.34
PBX4-202ENST00000557978 PLEKHA3Q9HB20 300 aa12.96□□□□□ -0.34
PBX4-202ENST00000557978 RANGRFQ9HD47 186 aaPredicted RBP12.96□□□□□ -0.34
PBX4-202ENST00000557978 PRR13Q9NZ81 148 aa12.96□□□□□ -0.34
PBX4-202ENST00000557978 FBXL7Q9UJT9 491 aa12.96□□□□□ -0.34
PBX4-202ENST00000557978 LINC01619G3V211 115 aa12.95□□□□□ -0.34
PBX4-202ENST00000557978 ST8SIA3O43173 380 aa12.95□□□□□ -0.34
PBX4-202ENST00000557978 HLA-AP01891 365 aaKnown RBP12.95□□□□□ -0.34
PBX4-202ENST00000557978 SULT1A3P0DMM9 295 aa12.95□□□□□ -0.34
PBX4-202ENST00000557978 SULT1A4P0DMN0 295 aa12.95□□□□□ -0.34
PBX4-202ENST00000557978 ZNF343Q6P1L6 599 aa12.95□□□□□ -0.34
PBX4-202ENST00000557978 Q6ZRM9 215 aa12.95□□□□□ -0.34
PBX4-202ENST00000557978 LYZL2Q7Z4W2 148 aa12.95□□□□□ -0.34
PBX4-202ENST00000557978 OR52E5Q8NH55 327 aa12.95□□□□□ -0.34
PBX4-202ENST00000557978 FANCD2OSQ96PS1 177 aa12.95□□□□□ -0.34
PBX4-202ENST00000557978 ALX4Q9H161 411 aaPredicted RBP12.95□□□□□ -0.34
PBX4-202ENST00000557978 C20orf85Q9H1P6 137 aa12.95□□□□□ -0.34
PBX4-202ENST00000557978 CACNG5Q9UF02 275 aa12.95□□□□□ -0.34
PBX4-202ENST00000557978 TBC1D24Q9ULP9 559 aa12.95□□□□□ -0.34
PBX4-202ENST00000557978 IGLV11-55A0A075B6I3 123 aa12.94□□□□□ -0.34
PBX4-202ENST00000557978 C9orf170A2RU37 121 aa12.94□□□□□ -0.34
PBX4-202ENST00000557978 DUS4LO95620 317 aaKnown RBP12.94□□□□□ -0.34
PBX4-202ENST00000557978 SPCS3P61009 180 aa12.94□□□□□ -0.34
PBX4-202ENST00000557978 C15orf32Q32M92 178 aa12.94□□□□□ -0.34
PBX4-202ENST00000557978 ANKRD55Q3KP44 614 aa12.94□□□□□ -0.34
PBX4-202ENST00000557978 AARDQ4LEZ3 155 aa12.94□□□□□ -0.34
PBX4-202ENST00000557978 C4orf46Q504U0 113 aa12.94□□□□□ -0.34
PBX4-202ENST00000557978 NMSQ5H8A3 153 aa12.94□□□□□ -0.34
PBX4-202ENST00000557978 SLC25A24Q6NUK1 477 aa12.94□□□□□ -0.34
PBX4-202ENST00000557978 C19orf35Q6ZS72 473 aa12.94□□□□□ -0.34
PBX4-202ENST00000557978 RCC1LQ96I51 464 aaKnown RBP12.94□□□□□ -0.34
PBX4-202ENST00000557978 CXorf58Q96LI9 332 aa12.94□□□□□ -0.34
PBX4-202ENST00000557978 ENY2Q9NPA8 101 aa12.94□□□□□ -0.34
PBX4-202ENST00000557978 PEF1Q9UBV8 284 aaKnown RBP12.94□□□□□ -0.34
PBX4-202ENST00000557978 TMED3Q9Y3Q3 217 aa12.94□□□□□ -0.34
PBX4-202ENST00000557978 F11RQ9Y624 299 aaKnown RBP12.94□□□□□ -0.34
PBX4-202ENST00000557978 INS-IGF2F8WCM5 200 aa12.93□□□□□ -0.34
PBX4-202ENST00000557978 DEFA1P59665 94 aa12.93□□□□□ -0.34
PBX4-202ENST00000557978 DEFA3P59666 94 aa12.93□□□□□ -0.34
PBX4-202ENST00000557978 DEFA5Q01523 94 aa12.93□□□□□ -0.34
PBX4-202ENST00000557978 DHRS2Q13268 280 aa12.93□□□□□ -0.34
PBX4-202ENST00000557978 EXOSC2Q13868 293 aaKnown RBP12.93□□□□□ -0.34
PBX4-202ENST00000557978 SMCO1Q147U7 214 aa12.93□□□□□ -0.34
PBX4-202ENST00000557978 LYG2Q86SG7 212 aa12.93□□□□□ -0.34
PBX4-202ENST00000557978 OR2C3Q8N628 320 aa12.93□□□□□ -0.34
PBX4-202ENST00000557978 COQ8AQ8NI60 647 aa12.93□□□□□ -0.34
PBX4-202ENST00000557978 MCRIP2Q9BUT9 160 aaKnown RBP12.93□□□□□ -0.34
PBX4-202ENST00000557978 IGHV4OR15-8A0A075B7B6 117 aa12.92□□□□□ -0.34
PBX4-202ENST00000557978 A0A087WW49 117 aa12.92□□□□□ -0.34
PBX4-202ENST00000557978 A0A1B0GU03 582 aa12.92□□□□□ -0.34
PBX4-202ENST00000557978 ANXA7P20073 488 aaKnown RBP12.92□□□□□ -0.34
PBX4-202ENST00000557978 ZP3P21754 424 aa12.92□□□□□ -0.34
PBX4-202ENST00000557978 SNCAP37840 140 aa12.92□□□□□ -0.34
PBX4-202ENST00000557978 ZNF114Q8NC26 417 aa12.92□□□□□ -0.34
PBX4-202ENST00000557978 OR1P1Q8NH06 330 aa12.92□□□□□ -0.34
PBX4-202ENST00000557978 ENKURQ8TC29 256 aa12.92□□□□□ -0.34
PBX4-202ENST00000557978 EEF1AKMT3Q96AZ1 226 aa12.92□□□□□ -0.34
PBX4-202ENST00000557978 GPR61Q9BZJ8 451 aa12.92□□□□□ -0.34
PBX4-202ENST00000557978 NUDT15Q9NV35 164 aa12.92□□□□□ -0.34
PBX4-202ENST00000557978 TRAV6A0A075B6T7 132 aa12.91□□□□□ -0.34
PBX4-202ENST00000557978 ANKRD34BA5PLL1 514 aa12.91□□□□□ -0.34
PBX4-202ENST00000557978 NDUFB8O95169 186 aa12.91□□□□□ -0.34
PBX4-202ENST00000557978 SLC25A6P12236 298 aa12.91□□□□□ -0.34
PBX4-202ENST00000557978 HOXA1P49639 335 aaPredicted RBP12.91□□□□□ -0.34
PBX4-202ENST00000557978 SUB1P53999 127 aaKnown RBP eCLIP12.91□□□□□ -0.34
PBX4-202ENST00000557978 IFITM3Q01628 133 aa12.91□□□□□ -0.34
PBX4-202ENST00000557978 PDLIM3Q53GG5 364 aaPredicted RBP12.91□□□□□ -0.34
PBX4-202ENST00000557978 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.9□□□□□ -0.34
PBX4-202ENST00000557978 TRBV7-1A0A0A6YYK4 115 aa12.9□□□□□ -0.34
PBX4-202ENST00000557978 H2AFB2P0C5Z0 115 aa12.9□□□□□ -0.34
PBX4-202ENST00000557978 SPINK9Q5DT21 86 aa12.9□□□□□ -0.34
PBX4-202ENST00000557978 OR1S1Q8NH92 325 aa12.9□□□□□ -0.34
PBX4-202ENST00000557978 VN1R17PQ8TDU5 208 aa12.9□□□□□ -0.34
PBX4-202ENST00000557978 SORL1Q92673 2214 aa12.89□□□□□ -0.35
PBX4-202ENST00000557978 CEBPZOSA8MTT3 80 aa12.89□□□□□ -0.35
PBX4-202ENST00000557978 IFNA21P01568 189 aa12.89□□□□□ -0.35
PBX4-202ENST00000557978 HOXB5P09067 269 aa12.89□□□□□ -0.35
PBX4-202ENST00000557978 IGLL1P15814 213 aa12.89□□□□□ -0.35
PBX4-202ENST00000557978 SLURP1P55000 103 aa12.89□□□□□ -0.35
PBX4-202ENST00000557978 DUSP18Q8NEJ0 188 aa12.89□□□□□ -0.35
PBX4-202ENST00000557978 DMRT1Q9Y5R6 373 aa12.89□□□□□ -0.35
PBX4-202ENST00000557978 OVOL1O14753 267 aa12.88□□□□□ -0.35
PBX4-202ENST00000557978 HOXD3P31249 432 aaPredicted RBP12.88□□□□□ -0.35
PBX4-202ENST00000557978 TNFRSF9Q07011 255 aa12.88□□□□□ -0.35
PBX4-202ENST00000557978 TATDN3Q17R31 274 aa12.88□□□□□ -0.35
PBX4-202ENST00000557978 RPEL1Q2QD12 228 aa12.88□□□□□ -0.35
PBX4-202ENST00000557978 MITD1Q8WV92 249 aa12.88□□□□□ -0.35
PBX4-202ENST00000557978 DCUN1D4Q92564 292 aa12.88□□□□□ -0.35
PBX4-202ENST00000557978 DLX4Q92988 240 aaPredicted RBP12.88□□□□□ -0.35
PBX4-202ENST00000557978 HIPK2Q9H2X6 1198 aa12.88□□□□□ -0.35
PBX4-202ENST00000557978 HEYLQ9NQ87 328 aaPredicted RBP12.88□□□□□ -0.35
PBX4-202ENST00000557978 HSPB7Q9UBY9 170 aa12.88□□□□□ -0.35
PBX4-202ENST00000557978 CORTO00230 105 aa12.88□□□□□ -0.35
PBX4-202ENST00000557978 HTR2BP41595 481 aa12.88□□□□□ -0.35
PBX4-202ENST00000557978 MFAP2P55001 183 aa12.88□□□□□ -0.35
PBX4-202ENST00000557978 OXLD1Q5BKU9 147 aa12.88□□□□□ -0.35
PBX4-202ENST00000557978 SAMD5Q5TGI4 173 aa12.88□□□□□ -0.35
PBX4-202ENST00000557978 GGNBP1Q5YKI7 109 aa12.88□□□□□ -0.35
PBX4-202ENST00000557978 ATP6V0BQ99437 205 aa12.88□□□□□ -0.35
PBX4-202ENST00000557978 MFSD2BA6NFX1 497 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms