RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 AARDQ4LEZ3 155 aa19.79■□□□□ 0.76
SMAD6-202ENST00000557916 SPINK9Q5DT21 86 aa19.79■□□□□ 0.76
SMAD6-202ENST00000557916 FAM223AQ8IWN6 122 aa19.79■□□□□ 0.76
SMAD6-202ENST00000557916 NECAP1Q8NC96 275 aa19.79■□□□□ 0.76
SMAD6-202ENST00000557916 FANCD2OSQ96PS1 177 aa19.79■□□□□ 0.76
SMAD6-202ENST00000557916 DUS4LO95620 317 aaKnown RBP19.78■□□□□ 0.76
SMAD6-202ENST00000557916 HIST1H1BP16401 226 aaKnown RBP19.78■□□□□ 0.76
SMAD6-202ENST00000557916 ATP5G2Q06055 141 aa19.78■□□□□ 0.76
SMAD6-202ENST00000557916 OR11H1Q8NG94 326 aa19.78■□□□□ 0.76
SMAD6-202ENST00000557916 COQ8AQ8NI60 647 aa19.78■□□□□ 0.76
SMAD6-202ENST00000557916 SMCO1Q147U7 214 aa19.77■□□□□ 0.76
SMAD6-202ENST00000557916 KLK9Q2XQG4 91 aa19.77■□□□□ 0.76
SMAD6-202ENST00000557916 NRARPQ7Z6K4 114 aa19.77■□□□□ 0.76
SMAD6-202ENST00000557916 OR52E5Q8NH55 327 aa19.77■□□□□ 0.76
SMAD6-202ENST00000557916 P2RX4Q99571 388 aa19.77■□□□□ 0.76
SMAD6-202ENST00000557916 FBXL7Q9UJT9 491 aa19.77■□□□□ 0.76
SMAD6-202ENST00000557916 KLK9Q9UKQ9 250 aa19.77■□□□□ 0.76
SMAD6-202ENST00000557916 TMED3Q9Y3Q3 217 aa19.77■□□□□ 0.76
SMAD6-202ENST00000557916 IGLV11-55A0A075B6I3 123 aa19.76■□□□□ 0.75
SMAD6-202ENST00000557916 A0A1B0GU03 582 aa19.76■□□□□ 0.75
SMAD6-202ENST00000557916 HOXB5P09067 269 aa19.76■□□□□ 0.75
SMAD6-202ENST00000557916 SPCS3P61009 180 aa19.76■□□□□ 0.75
SMAD6-202ENST00000557916 OR2C3Q8N628 320 aa19.76■□□□□ 0.75
SMAD6-202ENST00000557916 DUSP18Q8NEJ0 188 aa19.76■□□□□ 0.75
SMAD6-202ENST00000557916 OR52B4Q8NGK2 314 aa19.76■□□□□ 0.75
SMAD6-202ENST00000557916 OR1N2Q8NGR9 330 aa19.76■□□□□ 0.75
SMAD6-202ENST00000557916 F11RQ9Y624 299 aaKnown RBP19.76■□□□□ 0.75
SMAD6-202ENST00000557916 MGAM2Q2M2H8 2515 aa19.76■□□□□ 0.75
SMAD6-202ENST00000557916 CYB5BO43169 146 aa19.76■□□□□ 0.75
SMAD6-202ENST00000557916 ERHP84090 104 aaKnown RBP19.76■□□□□ 0.75
SMAD6-202ENST00000557916 C15orf32Q32M92 178 aa19.76■□□□□ 0.75
SMAD6-202ENST00000557916 ENY2Q9NPA8 101 aa19.76■□□□□ 0.75
SMAD6-202ENST00000557916 DMRT1Q9Y5R6 373 aa19.76■□□□□ 0.75
SMAD6-202ENST00000557916 NDUFB8O95169 186 aa19.75■□□□□ 0.75
SMAD6-202ENST00000557916 HOXA1P49639 335 aaPredicted RBP19.75■□□□□ 0.75
SMAD6-202ENST00000557916 SLC25A24Q6NUK1 477 aa19.75■□□□□ 0.75
SMAD6-202ENST00000557916 ZNF343Q6P1L6 599 aa19.75■□□□□ 0.75
SMAD6-202ENST00000557916 DPF1Q92782 380 aa19.75■□□□□ 0.75
SMAD6-202ENST00000557916 CACFD1Q9UGQ2 172 aa19.75■□□□□ 0.75
SMAD6-202ENST00000557916 CMYA5Q8N3K9 4069 aa19.74■□□□□ 0.75
SMAD6-202ENST00000557916 INS-IGF2F8WCM5 200 aa19.74■□□□□ 0.75
SMAD6-202ENST00000557916 ZNF616Q08AN1 781 aa19.74■□□□□ 0.75
SMAD6-202ENST00000557916 FHL3Q13643 280 aa19.74■□□□□ 0.75
SMAD6-202ENST00000557916 EXOSC2Q13868 293 aaKnown RBP19.74■□□□□ 0.75
SMAD6-202ENST00000557916 PDLIM3Q53GG5 364 aaPredicted RBP19.74■□□□□ 0.75
SMAD6-202ENST00000557916 GGNBP1Q5YKI7 109 aa19.74■□□□□ 0.75
SMAD6-202ENST00000557916 LINC00482Q8N8I6 264 aa19.74■□□□□ 0.75
SMAD6-202ENST00000557916 OR1L6Q8NGR2 347 aa19.74■□□□□ 0.75
SMAD6-202ENST00000557916 OR1S1Q8NH92 325 aa19.74■□□□□ 0.75
SMAD6-202ENST00000557916 MITD1Q8WV92 249 aa19.74■□□□□ 0.75
SMAD6-202ENST00000557916 THYN1Q9P016 225 aa19.74■□□□□ 0.75
SMAD6-202ENST00000557916 ADAP1O75689 374 aa19.73■□□□□ 0.75
SMAD6-202ENST00000557916 NXPH3O95157 252 aa19.73■□□□□ 0.75
SMAD6-202ENST00000557916 HSPB1P04792 205 aaKnown RBP19.73■□□□□ 0.75
SMAD6-202ENST00000557916 MFAP2P55001 183 aa19.73■□□□□ 0.75
SMAD6-202ENST00000557916 OR1P1Q8NH06 330 aa19.73■□□□□ 0.75
SMAD6-202ENST00000557916 SEC22CQ9BRL7 303 aa19.73■□□□□ 0.75
SMAD6-202ENST00000557916 IGHV4OR15-8A0A075B7B6 117 aa19.72■□□□□ 0.75
SMAD6-202ENST00000557916 A0A087WW49 117 aa19.72■□□□□ 0.75
SMAD6-202ENST00000557916 ANKRD34BA5PLL1 514 aa19.72■□□□□ 0.75
SMAD6-202ENST00000557916 CEBPZOSA8MTT3 80 aa19.72■□□□□ 0.75
SMAD6-202ENST00000557916 LINC01619G3V211 115 aa19.72■□□□□ 0.75
SMAD6-202ENST00000557916 SLC25A6P12236 298 aa19.72■□□□□ 0.75
SMAD6-202ENST00000557916 CD33P20138 364 aa19.72■□□□□ 0.75
SMAD6-202ENST00000557916 SNCAP37840 140 aa19.72■□□□□ 0.75
SMAD6-202ENST00000557916 PLET1Q6UQ28 207 aa19.72■□□□□ 0.75
SMAD6-202ENST00000557916 ZNF114Q8NC26 417 aa19.72■□□□□ 0.75
SMAD6-202ENST00000557916 WFDC9Q8NEX5 89 aa19.72■□□□□ 0.75
SMAD6-202ENST00000557916 ZNF431Q8TF32 576 aaPredicted RBP19.72■□□□□ 0.75
SMAD6-202ENST00000557916 RANGRFQ9HD47 186 aaPredicted RBP19.72■□□□□ 0.75
SMAD6-202ENST00000557916 PEF1Q9UBV8 284 aaKnown RBP19.71■□□□□ 0.75
SMAD6-202ENST00000557916 PITX3O75364 302 aa19.7■□□□□ 0.74
SMAD6-202ENST00000557916 IFNA21P01568 189 aa19.7■□□□□ 0.74
SMAD6-202ENST00000557916 OR8U8P0C7N1 319 aa19.7■□□□□ 0.74
SMAD6-202ENST00000557916 TNFRSF9Q07011 255 aa19.7■□□□□ 0.74
SMAD6-202ENST00000557916 HSPB7Q9UBY9 170 aa19.7■□□□□ 0.74
SMAD6-202ENST00000557916 S4R3C0 116 aa19.7■□□□□ 0.74
SMAD6-202ENST00000557916 IL5P05113 134 aa19.69■□□□□ 0.74
SMAD6-202ENST00000557916 EEF1AKMT3Q96AZ1 226 aa19.69■□□□□ 0.74
SMAD6-202ENST00000557916 CXorf58Q96LI9 332 aa19.69■□□□□ 0.74
SMAD6-202ENST00000557916 HEYLQ9NQ87 328 aaPredicted RBP19.69■□□□□ 0.74
SMAD6-202ENST00000557916 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.68■□□□□ 0.74
SMAD6-202ENST00000557916 MFSD2BA6NFX1 497 aa19.68■□□□□ 0.74
SMAD6-202ENST00000557916 INMT-MINDY4F8WBC2 141 aa19.68■□□□□ 0.74
SMAD6-202ENST00000557916 TRBV12-3P01733 135 aa19.68■□□□□ 0.74
SMAD6-202ENST00000557916 IGHV3-23P01764 117 aa19.68■□□□□ 0.74
SMAD6-202ENST00000557916 SUB1P53999 127 aaKnown RBP eCLIP19.68■□□□□ 0.74
SMAD6-202ENST00000557916 SLURP1P55000 103 aa19.68■□□□□ 0.74
SMAD6-202ENST00000557916 FAM209BQ5JX69 171 aa19.68■□□□□ 0.74
SMAD6-202ENST00000557916 C12orf45Q8N5I9 185 aaPredicted RBP19.68■□□□□ 0.74
SMAD6-202ENST00000557916 UXS1Q8NBZ7 420 aa19.68■□□□□ 0.74
SMAD6-202ENST00000557916 MISP3Q96FF7 219 aa19.68■□□□□ 0.74
SMAD6-202ENST00000557916 MARVELD1Q9BSK0 173 aa19.68■□□□□ 0.74
SMAD6-202ENST00000557916 RBKSQ9H477 322 aa19.68■□□□□ 0.74
SMAD6-202ENST00000557916 PALMDQ9NP74 551 aa19.68■□□□□ 0.74
SMAD6-202ENST00000557916 MPTX1A8MV57 137 aa19.67■□□□□ 0.74
SMAD6-202ENST00000557916 RNASE2P10153 161 aaKnown RBP19.67■□□□□ 0.74
SMAD6-202ENST00000557916 VN1R17PQ8TDU5 208 aa19.67■□□□□ 0.74
SMAD6-202ENST00000557916 CCDC140Q96MF4 163 aa19.67■□□□□ 0.74
SMAD6-202ENST00000557916 HIPK2Q9H2X6 1198 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms