RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 PLEKHA3Q9HB20 300 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 RANGRFQ9HD47 186 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-234ENST00000557703 ENY2Q9NPA8 101 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 NSG2Q9Y328 171 aa10.63□□□□□ -0.71
SHMT2-234ENST00000557703 F11RQ9Y624 299 aaKnown RBP10.63□□□□□ -0.71
SHMT2-234ENST00000557703 TRBV7-1A0A0A6YYK4 115 aa10.62□□□□□ -0.71
SHMT2-234ENST00000557703 A0A1W2PRX2 142 aa10.62□□□□□ -0.71
SHMT2-234ENST00000557703 IFNA21P01568 189 aa10.62□□□□□ -0.71
SHMT2-234ENST00000557703 AREGP15514 252 aa10.62□□□□□ -0.71
SHMT2-234ENST00000557703 ZP3P21754 424 aa10.62□□□□□ -0.71
SHMT2-234ENST00000557703 RHOGP84095 191 aa10.62□□□□□ -0.71
SHMT2-234ENST00000557703 ZNF616Q08AN1 781 aa10.62□□□□□ -0.71
SHMT2-234ENST00000557703 LCNL1Q6ZST4 164 aa10.62□□□□□ -0.71
SHMT2-234ENST00000557703 OR2C3Q8N628 320 aa10.62□□□□□ -0.71
SHMT2-234ENST00000557703 VN1R17PQ8TDU5 208 aa10.62□□□□□ -0.71
SHMT2-234ENST00000557703 GPR146Q96CH1 333 aa10.62□□□□□ -0.71
SHMT2-234ENST00000557703 MS4A10Q96PG2 267 aa10.62□□□□□ -0.71
SHMT2-234ENST00000557703 NUDT15Q9NV35 164 aa10.62□□□□□ -0.71
SHMT2-234ENST00000557703 GAR1Q9NY12 217 aaKnown RBP10.62□□□□□ -0.71
SHMT2-234ENST00000557703 IGLV11-55A0A075B6I3 123 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 CORTO00230 105 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 ST8SIA3O43173 380 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 PRAF2O60831 178 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 TSPAN15O95858 294 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 IL5P05113 134 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 H2AFB2P0C5Z0 115 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 SNCAP37840 140 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 WT1-ASQ06250 92 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 C8orf86Q6ZUL3 223 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 LYZL2Q7Z4W2 148 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 OR11H1Q8NG94 326 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 MITD1Q8WV92 249 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 DPF1Q92782 380 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 RCC1LQ96I51 464 aaKnown RBP10.61□□□□□ -0.71
SHMT2-234ENST00000557703 FANCD2OSQ96PS1 177 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 HINT2Q9BX68 163 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 ZMAT5Q9UDW3 170 aaKnown RBP10.61□□□□□ -0.71
SHMT2-234ENST00000557703 CACNG5Q9UF02 275 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 FLVCR2Q9UPI3 526 aa10.61□□□□□ -0.71
SHMT2-234ENST00000557703 DBX1A6NMT0 343 aa10.6□□□□□ -0.71
SHMT2-234ENST00000557703 LINC01619G3V211 115 aa10.6□□□□□ -0.71
SHMT2-234ENST00000557703 MED6O75586 246 aa10.6□□□□□ -0.71
SHMT2-234ENST00000557703 C15orf32Q32M92 178 aa10.6□□□□□ -0.71
SHMT2-234ENST00000557703 ANKRD55Q3KP44 614 aa10.6□□□□□ -0.71
SHMT2-234ENST00000557703 PLET1Q6UQ28 207 aa10.6□□□□□ -0.71
SHMT2-234ENST00000557703 Q6ZRM9 215 aa10.6□□□□□ -0.71
SHMT2-234ENST00000557703 OR10W1Q8NGF6 305 aa10.6□□□□□ -0.71
SHMT2-234ENST00000557703 OR1N2Q8NGR9 330 aa10.6□□□□□ -0.71
SHMT2-234ENST00000557703 CASTOR1Q8WTX7 329 aa10.6□□□□□ -0.71
SHMT2-234ENST00000557703 RAX2Q96IS3 184 aa10.6□□□□□ -0.71
SHMT2-234ENST00000557703 HIPK2Q9H2X6 1198 aa10.6□□□□□ -0.71
SHMT2-234ENST00000557703 PEF1Q9UBV8 284 aaKnown RBP10.6□□□□□ -0.71
SHMT2-234ENST00000557703 HSPB7Q9UBY9 170 aa10.6□□□□□ -0.71
SHMT2-234ENST00000557703 FBXL7Q9UJT9 491 aa10.6□□□□□ -0.71
SHMT2-234ENST00000557703 NBEAL1Q6ZS30 2694 aa10.6□□□□□ -0.71
SHMT2-234ENST00000557703 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.59□□□□□ -0.71
SHMT2-234ENST00000557703 A0A0G2JRQ6 117 aa10.59□□□□□ -0.71
SHMT2-234ENST00000557703 PITX3O75364 302 aa10.59□□□□□ -0.71
SHMT2-234ENST00000557703 APELAP0DMC3 54 aa10.59□□□□□ -0.71
SHMT2-234ENST00000557703 ANXA7P20073 488 aaKnown RBP10.59□□□□□ -0.71
SHMT2-234ENST00000557703 CD33P20138 364 aa10.59□□□□□ -0.71
SHMT2-234ENST00000557703 HTR2BP41595 481 aa10.59□□□□□ -0.71
SHMT2-234ENST00000557703 IFITM3Q01628 133 aa10.59□□□□□ -0.71
SHMT2-234ENST00000557703 TATDN3Q17R31 274 aa10.59□□□□□ -0.71
SHMT2-234ENST00000557703 PVRIGQ6DKI7 326 aa10.59□□□□□ -0.71
SHMT2-234ENST00000557703 ETV3LQ6ZN32 361 aa10.59□□□□□ -0.71
SHMT2-234ENST00000557703 LINC00482Q8N8I6 264 aa10.59□□□□□ -0.71
SHMT2-234ENST00000557703 ZNF431Q8TF32 576 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-234ENST00000557703 EEF1AKMT3Q96AZ1 226 aa10.59□□□□□ -0.71
SHMT2-234ENST00000557703 CIB3Q96Q77 187 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-234ENST00000557703 TXN2Q99757 166 aa10.59□□□□□ -0.71
SHMT2-234ENST00000557703 MARVELD1Q9BSK0 173 aa10.59□□□□□ -0.71
SHMT2-234ENST00000557703 GNB4Q9HAV0 340 aa10.59□□□□□ -0.71
SHMT2-234ENST00000557703 GPN1Q9HCN4 374 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-234ENST00000557703 U3KQ87 197 aa10.59□□□□□ -0.71
SHMT2-234ENST00000557703 SNRPGP15A8MWD9 76 aa10.58□□□□□ -0.72
SHMT2-234ENST00000557703 MYOD1P15172 320 aa10.58□□□□□ -0.72
SHMT2-234ENST00000557703 FCGR2BP31994 310 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-234ENST00000557703 INSL3P51460 131 aa10.58□□□□□ -0.72
SHMT2-234ENST00000557703 TNFRSF9Q07011 255 aa10.58□□□□□ -0.72
SHMT2-234ENST00000557703 EXOSC2Q13868 293 aaKnown RBP10.58□□□□□ -0.72
SHMT2-234ENST00000557703 IZUMO4Q1ZYL8 232 aa10.58□□□□□ -0.72
SHMT2-234ENST00000557703 SLC25A24Q6NUK1 477 aa10.58□□□□□ -0.72
SHMT2-234ENST00000557703 SPSB3Q6PJ21 355 aa10.58□□□□□ -0.72
SHMT2-234ENST00000557703 OR1S1Q8NH92 325 aa10.58□□□□□ -0.72
SHMT2-234ENST00000557703 TRAV6A0A075B6T7 132 aa10.57□□□□□ -0.72
SHMT2-234ENST00000557703 OR2J3O76001 311 aa10.57□□□□□ -0.72
SHMT2-234ENST00000557703 PTTG1O95997 202 aa10.57□□□□□ -0.72
SHMT2-234ENST00000557703 HOXA1P49639 335 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-234ENST00000557703 RPP30P78346 268 aaKnown RBP10.57□□□□□ -0.72
SHMT2-234ENST00000557703 BSXQ3C1V8 233 aa10.57□□□□□ -0.72
SHMT2-234ENST00000557703 C2orf83Q53S99 150 aa10.57□□□□□ -0.72
SHMT2-234ENST00000557703 GGNBP1Q5YKI7 109 aa10.57□□□□□ -0.72
SHMT2-234ENST00000557703 NRARPQ7Z6K4 114 aa10.57□□□□□ -0.72
SHMT2-234ENST00000557703 HEYLQ9NQ87 328 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-234ENST00000557703 NOTCH1P46531 2555 aa10.56□□□□□ -0.72
SHMT2-234ENST00000557703 CEBPZOSA8MTT3 80 aa10.56□□□□□ -0.72
SHMT2-234ENST00000557703 WIPF1O43516 503 aa10.56□□□□□ -0.72
SHMT2-234ENST00000557703 SCGB2A1O75556 95 aa10.56□□□□□ -0.72
SHMT2-234ENST00000557703 IGHV3-11P01762 117 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms