RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CACNG8Q8WXS5 425 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 NPCDR1Q9BY65 106 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 C7orf69Q9H7B7 122 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 NPVFQ9HCQ7 196 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 KCNIP2Q9NS61 270 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 C1RLQ9NZP8 487 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 RFNGQ9Y644 331 aa9.98□□□□□ -0.81
SHMT2-233ENST00000557529 MED13LQ71F56 2210 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 WNK2Q9Y3S1 2297 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 A0A096LNT2 108 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 A0A1B0GW64 132 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 IGLC7A0M8Q6 106 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 BTBD17A6NE02 478 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 TSPAN9O75954 239 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 HBE1P02100 147 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 H2AFB1P0C5Y9 115 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 TMEM11P17152 192 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 GPX4P36969 197 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-233ENST00000557529 FHITP49789 147 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 RAB2AP61019 212 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 RAB31Q13636 194 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 Q5PR19 223 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 PRSS57Q6UWY2 283 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 TREML4Q6UXN2 200 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 PIP4P2Q8N4L2 257 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 ZNF114Q8NC26 417 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 SRSF12Q8WXF0 261 aaKnown RBP9.97□□□□□ -0.81
SHMT2-233ENST00000557529 HIF1ANQ9NWT6 349 aa9.97□□□□□ -0.81
SHMT2-233ENST00000557529 TRAV40A0A0B4J280 105 aa9.96□□□□□ -0.82
SHMT2-233ENST00000557529 KRBOX1C9JBD0 128 aa9.96□□□□□ -0.82
SHMT2-233ENST00000557529 J3QLI3 93 aa9.96□□□□□ -0.82
SHMT2-233ENST00000557529 CNIH1O95406 144 aa9.96□□□□□ -0.82
SHMT2-233ENST00000557529 CD24P25063 80 aa9.96□□□□□ -0.82
SHMT2-233ENST00000557529 AKR1C1Q04828 323 aa9.96□□□□□ -0.82
SHMT2-233ENST00000557529 CD69Q07108 199 aa9.96□□□□□ -0.82
SHMT2-233ENST00000557529 ARSJQ5FYB0 599 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-233ENST00000557529 TOR2AQ5JU69 321 aa9.96□□□□□ -0.82
SHMT2-233ENST00000557529 TEPPQ6URK8 271 aa9.96□□□□□ -0.82
SHMT2-233ENST00000557529 P2RX4Q99571 388 aa9.96□□□□□ -0.82
SHMT2-233ENST00000557529 RPRMQ9NS64 109 aa9.96□□□□□ -0.82
SHMT2-233ENST00000557529 UTP20O75691 2785 aaKnown RBP9.96□□□□□ -0.82
SHMT2-233ENST00000557529 PTPN13Q12923 2485 aa9.95□□□□□ -0.82
SHMT2-233ENST00000557529 TRAV1-1A0A0B4J248 108 aa9.95□□□□□ -0.82
SHMT2-233ENST00000557529 NCBP2LA6PVI3 153 aaKnown RBP9.95□□□□□ -0.82
SHMT2-233ENST00000557529 TEX22C9J3V5 150 aa9.95□□□□□ -0.82
SHMT2-233ENST00000557529 FCN1O00602 326 aa9.95□□□□□ -0.82
SHMT2-233ENST00000557529 ZP3P21754 424 aa9.95□□□□□ -0.82
SHMT2-233ENST00000557529 PAX6P26367 422 aa9.95□□□□□ -0.82
SHMT2-233ENST00000557529 OPRK1P41145 380 aa9.95□□□□□ -0.82
SHMT2-233ENST00000557529 ELLP55199 621 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-233ENST00000557529 FFAR4Q5NUL3 377 aa9.95□□□□□ -0.82
SHMT2-233ENST00000557529 PVRIGQ6DKI7 326 aa9.95□□□□□ -0.82
SHMT2-233ENST00000557529 ETFRF1Q6IPR1 90 aa9.95□□□□□ -0.82
SHMT2-233ENST00000557529 TMEM144Q7Z5S9 345 aa9.95□□□□□ -0.82
SHMT2-233ENST00000557529 OR1P1Q8NH06 330 aa9.95□□□□□ -0.82
SHMT2-233ENST00000557529 SLC35E1Q96K37 410 aa9.95□□□□□ -0.82
SHMT2-233ENST00000557529 LSM4Q9Y4Z0 139 aaKnown RBP9.95□□□□□ -0.82
SHMT2-233ENST00000557529 ABCA2Q9BZC7 2435 aa9.94□□□□□ -0.82
SHMT2-233ENST00000557529 CORTO00230 105 aa9.94□□□□□ -0.82
SHMT2-233ENST00000557529 SSBP2P81877 361 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-233ENST00000557529 FXYD3Q14802 87 aa9.94□□□□□ -0.82
SHMT2-233ENST00000557529 ACOT6Q3I5F7 207 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-233ENST00000557529 RUSC1-AS1Q66K80 236 aa9.94□□□□□ -0.82
SHMT2-233ENST00000557529 ACSM6Q6P461 480 aa9.94□□□□□ -0.82
SHMT2-233ENST00000557529 ZNF562Q6V9R5 426 aa9.94□□□□□ -0.82
SHMT2-233ENST00000557529 SLC16A13Q7RTY0 426 aa9.94□□□□□ -0.82
SHMT2-233ENST00000557529 OR1L6Q8NGR2 347 aa9.94□□□□□ -0.82
SHMT2-233ENST00000557529 ABHD5Q8WTS1 349 aa9.94□□□□□ -0.82
SHMT2-233ENST00000557529 SFT2D1Q8WV19 159 aa9.94□□□□□ -0.82
SHMT2-233ENST00000557529 MBD3L1Q8WWY6 194 aa9.94□□□□□ -0.82
SHMT2-233ENST00000557529 MGST2Q99735 147 aa9.94□□□□□ -0.82
SHMT2-233ENST00000557529 PBDC1Q9BVG4 233 aa9.94□□□□□ -0.82
SHMT2-233ENST00000557529 MEGF9Q9H1U4 602 aa9.94□□□□□ -0.82
SHMT2-233ENST00000557529 RNF223E7ERA6 249 aa9.93□□□□□ -0.82
SHMT2-233ENST00000557529 AGPAT2O15120 278 aa9.93□□□□□ -0.82
SHMT2-233ENST00000557529 AREGP15514 252 aa9.93□□□□□ -0.82
SHMT2-233ENST00000557529 M6PRP20645 277 aa9.93□□□□□ -0.82
SHMT2-233ENST00000557529 GAMTQ14353 236 aa9.93□□□□□ -0.82
SHMT2-233ENST00000557529 FAM120AOSQ5T036 256 aa9.93□□□□□ -0.82
SHMT2-233ENST00000557529 BPIFCQ8NFQ6 507 aa9.93□□□□□ -0.82
SHMT2-233ENST00000557529 OR10G4Q8NGN3 311 aa9.93□□□□□ -0.82
SHMT2-233ENST00000557529 OR10G9Q8NGN4 311 aa9.93□□□□□ -0.82
SHMT2-233ENST00000557529 OR10G7Q8NGN6 311 aa9.93□□□□□ -0.82
SHMT2-233ENST00000557529 SSMEM1Q8WWF3 244 aa9.93□□□□□ -0.82
SHMT2-233ENST00000557529 RCC1LQ96I51 464 aaKnown RBP9.93□□□□□ -0.82
SHMT2-233ENST00000557529 GGTLC1Q9BX51 225 aa9.93□□□□□ -0.82
SHMT2-233ENST00000557529 ACTR3CQ9C0K3 210 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-233ENST00000557529 VSIRQ9H7M9 311 aa9.93□□□□□ -0.82
SHMT2-233ENST00000557529 FAM96BQ9Y3D0 163 aa9.93□□□□□ -0.82
SHMT2-233ENST00000557529 F11RQ9Y624 299 aaKnown RBP9.93□□□□□ -0.82
SHMT2-233ENST00000557529 ANKRD17O75179 2603 aaKnown RBP9.92□□□□□ -0.82
SHMT2-233ENST00000557529 IGHV3OR16-10A0A075B7F0 116 aa9.92□□□□□ -0.82
SHMT2-233ENST00000557529 CYB5BO43169 146 aa9.92□□□□□ -0.82
SHMT2-233ENST00000557529 HLA-DRB1P01911 266 aa9.92□□□□□ -0.82
SHMT2-233ENST00000557529 REG1AP05451 166 aa9.92□□□□□ -0.82
SHMT2-233ENST00000557529 IGHV4-38-2P0DP08 117 aa9.92□□□□□ -0.82
SHMT2-233ENST00000557529 RPL29P47914 159 aaKnown RBP9.92□□□□□ -0.82
SHMT2-233ENST00000557529 BPIFB3P59826 476 aa9.92□□□□□ -0.82
SHMT2-233ENST00000557529 FBLN7Q53RD9 439 aa9.92□□□□□ -0.82
SHMT2-233ENST00000557529 SPSB3Q6PJ21 355 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms