RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 DHFRP00374 187 aa11.49□□□□□ -0.57
VIPAS39-210ENST00000557466 IFNA17P01571 189 aa11.49□□□□□ -0.57
VIPAS39-210ENST00000557466 KLK9Q2XQG4 91 aa11.49□□□□□ -0.57
VIPAS39-210ENST00000557466 FAM223AQ8IWN6 122 aa11.49□□□□□ -0.57
VIPAS39-210ENST00000557466 OR2C3Q8N628 320 aa11.49□□□□□ -0.57
VIPAS39-210ENST00000557466 COQ8AQ8NI60 647 aa11.49□□□□□ -0.57
VIPAS39-210ENST00000557466 P2RX4Q99571 388 aa11.49□□□□□ -0.57
VIPAS39-210ENST00000557466 SEC22CQ9BRL7 303 aa11.49□□□□□ -0.57
VIPAS39-210ENST00000557466 KLK9Q9UKQ9 250 aa11.49□□□□□ -0.57
VIPAS39-210ENST00000557466 A0A0G2JLM5 398 aa11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 NDUFB8O95169 186 aa11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 HOXB5P09067 269 aa11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 DEFA4P12838 97 aa11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 HIST1H1BP16401 226 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 MYCNOSP40205 109 aa11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 HOXA1P49639 335 aaPredicted RBP11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 MFAP2P55001 183 aa11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 FHL3Q13643 280 aa11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 EXOSC2Q13868 293 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 SMCO1Q147U7 214 aa11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 GGNBP1Q5YKI7 109 aa11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 MRPL41Q8IXM3 137 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 NECAP1Q8NC96 275 aa11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 DUSP18Q8NEJ0 188 aa11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 USMG5Q96IX5 58 aa11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 FBXL7Q9UJT9 491 aa11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 TMED3Q9Y3Q3 217 aa11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 F11RQ9Y624 299 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-210ENST00000557466 IGHV4OR15-8A0A075B7B6 117 aa11.47□□□□□ -0.57
VIPAS39-210ENST00000557466 A0A087WW49 117 aa11.47□□□□□ -0.57
VIPAS39-210ENST00000557466 A0A1B0GU03 582 aa11.47□□□□□ -0.57
VIPAS39-210ENST00000557466 ADAP1O75689 374 aa11.47□□□□□ -0.57
VIPAS39-210ENST00000557466 SPCS3P61009 180 aa11.47□□□□□ -0.57
VIPAS39-210ENST00000557466 ATP5G2Q06055 141 aa11.47□□□□□ -0.57
VIPAS39-210ENST00000557466 C15orf32Q32M92 178 aa11.47□□□□□ -0.57
VIPAS39-210ENST00000557466 PDLIM3Q53GG5 364 aaPredicted RBP11.47□□□□□ -0.57
VIPAS39-210ENST00000557466 ZNF343Q6P1L6 599 aa11.47□□□□□ -0.57
VIPAS39-210ENST00000557466 LINC00482Q8N8I6 264 aa11.47□□□□□ -0.57
VIPAS39-210ENST00000557466 ZNF114Q8NC26 417 aa11.47□□□□□ -0.57
VIPAS39-210ENST00000557466 OR11H1Q8NG94 326 aa11.47□□□□□ -0.57
VIPAS39-210ENST00000557466 OR52E5Q8NH55 327 aa11.47□□□□□ -0.57
VIPAS39-210ENST00000557466 MITD1Q8WV92 249 aa11.47□□□□□ -0.57
VIPAS39-210ENST00000557466 S4R3C0 116 aa11.47□□□□□ -0.57
VIPAS39-210ENST00000557466 ANKRD34BA5PLL1 514 aa11.46□□□□□ -0.57
VIPAS39-210ENST00000557466 INS-IGF2F8WCM5 200 aa11.46□□□□□ -0.57
VIPAS39-210ENST00000557466 PITX3O75364 302 aa11.46□□□□□ -0.57
VIPAS39-210ENST00000557466 TRBV12-3P01733 135 aa11.46□□□□□ -0.57
VIPAS39-210ENST00000557466 SPNP16150 400 aa11.46□□□□□ -0.57
VIPAS39-210ENST00000557466 ZNF616Q08AN1 781 aa11.46□□□□□ -0.57
VIPAS39-210ENST00000557466 C11orf87Q6NUJ2 197 aa11.46□□□□□ -0.57
VIPAS39-210ENST00000557466 OR1N2Q8NGR9 330 aa11.46□□□□□ -0.57
VIPAS39-210ENST00000557466 OR1S1Q8NH92 325 aa11.46□□□□□ -0.57
VIPAS39-210ENST00000557466 ZNF431Q8TF32 576 aaPredicted RBP11.46□□□□□ -0.57
VIPAS39-210ENST00000557466 MFSD2BA6NFX1 497 aa11.45□□□□□ -0.58
VIPAS39-210ENST00000557466 CEBPZOSA8MTT3 80 aa11.45□□□□□ -0.58
VIPAS39-210ENST00000557466 MPTX1A8MV57 137 aa11.45□□□□□ -0.58
VIPAS39-210ENST00000557466 LINC01619G3V211 115 aa11.45□□□□□ -0.58
VIPAS39-210ENST00000557466 IL5P05113 134 aa11.45□□□□□ -0.58
VIPAS39-210ENST00000557466 SLC25A6P12236 298 aa11.45□□□□□ -0.58
VIPAS39-210ENST00000557466 ERHP84090 104 aaKnown RBP11.45□□□□□ -0.58
VIPAS39-210ENST00000557466 TNFRSF9Q07011 255 aa11.45□□□□□ -0.58
VIPAS39-210ENST00000557466 SLC25A24Q6NUK1 477 aa11.45□□□□□ -0.58
VIPAS39-210ENST00000557466 PLET1Q6UQ28 207 aa11.45□□□□□ -0.58
VIPAS39-210ENST00000557466 OR1P1Q8NH06 330 aa11.45□□□□□ -0.58
VIPAS39-210ENST00000557466 DPF1Q92782 380 aa11.45□□□□□ -0.58
VIPAS39-210ENST00000557466 ENY2Q9NPA8 101 aa11.45□□□□□ -0.58
VIPAS39-210ENST00000557466 HSPB7Q9UBY9 170 aa11.45□□□□□ -0.58
VIPAS39-210ENST00000557466 INMT-MINDY4F8WBC2 141 aa11.44□□□□□ -0.58
VIPAS39-210ENST00000557466 CYB5BO43169 146 aa11.44□□□□□ -0.58
VIPAS39-210ENST00000557466 IGHV3-23P01764 117 aa11.44□□□□□ -0.58
VIPAS39-210ENST00000557466 HSPB1P04792 205 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-210ENST00000557466 OR8U8P0C7N1 319 aa11.44□□□□□ -0.58
VIPAS39-210ENST00000557466 RNASE2P10153 161 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-210ENST00000557466 CD33P20138 364 aa11.44□□□□□ -0.58
VIPAS39-210ENST00000557466 SLURP1P55000 103 aa11.44□□□□□ -0.58
VIPAS39-210ENST00000557466 OR1L6Q8NGR2 347 aa11.44□□□□□ -0.58
VIPAS39-210ENST00000557466 CCDC140Q96MF4 163 aa11.44□□□□□ -0.58
VIPAS39-210ENST00000557466 MARVELD1Q9BSK0 173 aa11.44□□□□□ -0.58
VIPAS39-210ENST00000557466 RBKSQ9H477 322 aa11.44□□□□□ -0.58
VIPAS39-210ENST00000557466 PALMDQ9NP74 551 aa11.44□□□□□ -0.58
VIPAS39-210ENST00000557466 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.43□□□□□ -0.58
VIPAS39-210ENST00000557466 K7EIM0 57 aa11.43□□□□□ -0.58
VIPAS39-210ENST00000557466 CCSO14618 274 aa11.43□□□□□ -0.58
VIPAS39-210ENST00000557466 IFNA21P01568 189 aa11.43□□□□□ -0.58
VIPAS39-210ENST00000557466 BSXQ3C1V8 233 aa11.43□□□□□ -0.58
VIPAS39-210ENST00000557466 C12orf45Q8N5I9 185 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-210ENST00000557466 WFDC9Q8NEX5 89 aa11.43□□□□□ -0.58
VIPAS39-210ENST00000557466 EEF1AKMT3Q96AZ1 226 aa11.43□□□□□ -0.58
VIPAS39-210ENST00000557466 MISP3Q96FF7 219 aa11.43□□□□□ -0.58
VIPAS39-210ENST00000557466 RANGRFQ9HD47 186 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-210ENST00000557466 HEYLQ9NQ87 328 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-210ENST00000557466 THYN1Q9P016 225 aa11.43□□□□□ -0.58
VIPAS39-210ENST00000557466 PEF1Q9UBV8 284 aaKnown RBP11.43□□□□□ -0.58
VIPAS39-210ENST00000557466 CACFD1Q9UGQ2 172 aa11.43□□□□□ -0.58
VIPAS39-210ENST00000557466 NBEAL1Q6ZS30 2694 aa11.42□□□□□ -0.58
VIPAS39-210ENST00000557466 IGHV3-21A0A0B4J1V1 117 aa11.42□□□□□ -0.58
VIPAS39-210ENST00000557466 PTTG1O95997 202 aa11.42□□□□□ -0.58
VIPAS39-210ENST00000557466 HOXD3P31249 432 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-210ENST00000557466 SNCAP37840 140 aa11.42□□□□□ -0.58
VIPAS39-210ENST00000557466 PVRIGQ6DKI7 326 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms