RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 C20orf85Q9H1P6 137 aa10.62□□□□□ -0.71
VPS33B-206ENST00000557358 TRAV3A0A0B4J244 114 aa10.61□□□□□ -0.71
VPS33B-206ENST00000557358 TEX50A0A1B0GTY4 177 aa10.61□□□□□ -0.71
VPS33B-206ENST00000557358 E7EUB6 86 aa10.61□□□□□ -0.71
VPS33B-206ENST00000557358 CD69Q07108 199 aa10.61□□□□□ -0.71
VPS33B-206ENST00000557358 PLET1Q6UQ28 207 aa10.61□□□□□ -0.71
VPS33B-206ENST00000557358 NUDT15Q9NV35 164 aa10.61□□□□□ -0.71
VPS33B-206ENST00000557358 GPR132Q9UNW8 380 aa10.61□□□□□ -0.71
VPS33B-206ENST00000557358 PIGBOS1A0A0B4J2F0 54 aa10.6□□□□□ -0.71
VPS33B-206ENST00000557358 IGLC7A0M8Q6 106 aa10.6□□□□□ -0.71
VPS33B-206ENST00000557358 C15orf61A6NNL5 157 aa10.6□□□□□ -0.71
VPS33B-206ENST00000557358 MYOD1P15172 320 aa10.6□□□□□ -0.71
VPS33B-206ENST00000557358 SPNP16150 400 aa10.6□□□□□ -0.71
VPS33B-206ENST00000557358 ARL3P36405 182 aa10.6□□□□□ -0.71
VPS33B-206ENST00000557358 ERHP84090 104 aaKnown RBP10.6□□□□□ -0.71
VPS33B-206ENST00000557358 OXA1LQ15070 435 aa10.6□□□□□ -0.71
VPS33B-206ENST00000557358 FAM106AQ4KMX7 169 aa10.6□□□□□ -0.71
VPS33B-206ENST00000557358 SLC25A24Q6NUK1 477 aa10.6□□□□□ -0.71
VPS33B-206ENST00000557358 SEC22AQ96IW7 307 aa10.6□□□□□ -0.71
VPS33B-206ENST00000557358 PRR25Q96S07 402 aa10.6□□□□□ -0.71
VPS33B-206ENST00000557358 ENY2Q9NPA8 101 aa10.6□□□□□ -0.71
VPS33B-206ENST00000557358 NDUFA4L2Q9NRX3 87 aa10.6□□□□□ -0.71
VPS33B-206ENST00000557358 KCNIP3Q9Y2W7 256 aa10.6□□□□□ -0.71
VPS33B-206ENST00000557358 NSG2Q9Y328 171 aa10.6□□□□□ -0.71
VPS33B-206ENST00000557358 IGLV11-55A0A075B6I3 123 aa10.59□□□□□ -0.71
VPS33B-206ENST00000557358 TRAV6A0A075B6T7 132 aa10.59□□□□□ -0.71
VPS33B-206ENST00000557358 H2AFB2P0C5Z0 115 aa10.59□□□□□ -0.71
VPS33B-206ENST00000557358 DHODHQ02127 395 aa10.59□□□□□ -0.71
VPS33B-206ENST00000557358 CLEC19AQ6UXS0 136 aa10.59□□□□□ -0.71
VPS33B-206ENST00000557358 TMED4Q7Z7H5 227 aa10.59□□□□□ -0.71
VPS33B-206ENST00000557358 SGPP2Q8IWX5 399 aa10.59□□□□□ -0.71
VPS33B-206ENST00000557358 CENPSQ8N2Z9 138 aa10.59□□□□□ -0.71
VPS33B-206ENST00000557358 DYNLRB2Q8TF09 96 aa10.59□□□□□ -0.71
VPS33B-206ENST00000557358 FANCD2OSQ96PS1 177 aa10.59□□□□□ -0.71
VPS33B-206ENST00000557358 C5orf66Q9H5L9 145 aa10.59□□□□□ -0.71
VPS33B-206ENST00000557358 PLEKHA3Q9HB20 300 aa10.59□□□□□ -0.71
VPS33B-206ENST00000557358 TMEM14BQ9NUH8 114 aa10.59□□□□□ -0.71
VPS33B-206ENST00000557358 GAR1Q9NY12 217 aaKnown RBP10.59□□□□□ -0.71
VPS33B-206ENST00000557358 CACFD1Q9UGQ2 172 aa10.59□□□□□ -0.71
VPS33B-206ENST00000557358 FLVCR2Q9UPI3 526 aa10.59□□□□□ -0.71
VPS33B-206ENST00000557358 TGP01266 2768 aa10.58□□□□□ -0.72
VPS33B-206ENST00000557358 A0A1B0GW64 132 aa10.58□□□□□ -0.72
VPS33B-206ENST00000557358 NDUFB8O95169 186 aa10.58□□□□□ -0.72
VPS33B-206ENST00000557358 IFNA17P01571 189 aa10.58□□□□□ -0.72
VPS33B-206ENST00000557358 TRBV12-3P01733 135 aa10.58□□□□□ -0.72
VPS33B-206ENST00000557358 ANXA3P12429 323 aa10.58□□□□□ -0.72
VPS33B-206ENST00000557358 HSPE1P61604 102 aaKnown RBP10.58□□□□□ -0.72
VPS33B-206ENST00000557358 LCN12Q6JVE5 192 aa10.58□□□□□ -0.72
VPS33B-206ENST00000557358 FAM219AQ8IW50 185 aa10.58□□□□□ -0.72
VPS33B-206ENST00000557358 SLC35G3Q8N808 338 aa10.58□□□□□ -0.72
VPS33B-206ENST00000557358 OR10W1Q8NGF6 305 aa10.58□□□□□ -0.72
VPS33B-206ENST00000557358 VN1R17PQ8TDU5 208 aa10.58□□□□□ -0.72
VPS33B-206ENST00000557358 TP53RKQ96S44 253 aa10.58□□□□□ -0.72
VPS33B-206ENST00000557358 RTBDNQ9BSG5 229 aaPredicted RBP10.58□□□□□ -0.72
VPS33B-206ENST00000557358 F11RQ9Y624 299 aaKnown RBP10.58□□□□□ -0.72
VPS33B-206ENST00000557358 SMAD5-AS1Q9Y6J3 95 aa10.58□□□□□ -0.72
VPS33B-206ENST00000557358 ZNF320A2RRD8 509 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 CGB1A6NKQ9 187 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 INMT-MINDY4F8WBC2 141 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 BMPR1BO00238 502 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 IGHV3-23P01764 117 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 CLEC3BP05452 202 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 GP9P14770 177 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 UCP1P25874 307 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 SNCAP37840 140 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 SUB1P53999 127 aaKnown RBP eCLIP10.57□□□□□ -0.72
VPS33B-206ENST00000557358 PRCDQ00LT1 54 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 KLK9Q2XQG4 91 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 OR1P1Q8NH06 330 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 B9D2Q9BPU9 175 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 MARVELD1Q9BSK0 173 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 NAA60Q9H7X0 242 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 SIGLEC8Q9NYZ4 499 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 KLK9Q9UKQ9 250 aa10.57□□□□□ -0.72
VPS33B-206ENST00000557358 PPP5D1E7EU14 171 aa10.56□□□□□ -0.72
VPS33B-206ENST00000557358 IGLV1-51P01701 117 aa10.56□□□□□ -0.72
VPS33B-206ENST00000557358 AKR1C4P17516 323 aa10.56□□□□□ -0.72
VPS33B-206ENST00000557358 ANXA7P20073 488 aaKnown RBP10.56□□□□□ -0.72
VPS33B-206ENST00000557358 UBE2MP61081 183 aaKnown RBP10.56□□□□□ -0.72
VPS33B-206ENST00000557358 WT1-ASQ06250 92 aa10.56□□□□□ -0.72
VPS33B-206ENST00000557358 SP6Q3SY56 376 aa10.56□□□□□ -0.72
VPS33B-206ENST00000557358 SPSB3Q6PJ21 355 aa10.56□□□□□ -0.72
VPS33B-206ENST00000557358 C19orf35Q6ZS72 473 aa10.56□□□□□ -0.72
VPS33B-206ENST00000557358 GTSCR1Q86UQ5 136 aa10.56□□□□□ -0.72
VPS33B-206ENST00000557358 GPHB5Q86YW7 130 aa10.56□□□□□ -0.72
VPS33B-206ENST00000557358 OR2K2Q8NGT1 345 aa10.56□□□□□ -0.72
VPS33B-206ENST00000557358 RBPMSQ93062 196 aaKnown RBP10.56□□□□□ -0.72
VPS33B-206ENST00000557358 TMEM230Q96A57 120 aa10.56□□□□□ -0.72
VPS33B-206ENST00000557358 ATP6V0BQ99437 205 aa10.56□□□□□ -0.72
VPS33B-206ENST00000557358 TMEM222Q9H0R3 208 aa10.56□□□□□ -0.72
VPS33B-206ENST00000557358 CRYM-AS1A6NIL9 109 aa10.55□□□□□ -0.72
VPS33B-206ENST00000557358 LGALS9O00182 355 aa10.55□□□□□ -0.72
VPS33B-206ENST00000557358 PRAF2O60831 178 aa10.55□□□□□ -0.72
VPS33B-206ENST00000557358 SCGB2A1O75556 95 aa10.55□□□□□ -0.72
VPS33B-206ENST00000557358 OR2C1O95371 312 aa10.55□□□□□ -0.72
VPS33B-206ENST00000557358 IGKV1-39P01597 117 aa10.55□□□□□ -0.72
VPS33B-206ENST00000557358 IGKV1D-39P04432 117 aa10.55□□□□□ -0.72
VPS33B-206ENST00000557358 OR5AC1P0C628 307 aa10.55□□□□□ -0.72
VPS33B-206ENST00000557358 NHLRC4P0CG21 123 aaPredicted RBP10.55□□□□□ -0.72
VPS33B-206ENST00000557358 GPR183P32249 361 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms