RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 TRBV7-1A0A0A6YYK4 115 aa17.47■□□□□ 0.39
TDP1-216ENST00000556867 A0A0B4J293 547 aa17.47■□□□□ 0.39
TDP1-216ENST00000556867 MFSD2BA6NFX1 497 aa17.47■□□□□ 0.39
TDP1-216ENST00000556867 FAM219AQ8IW50 185 aa17.47■□□□□ 0.39
TDP1-216ENST00000556867 LHFPL5Q8TAF8 219 aa17.47■□□□□ 0.39
TDP1-216ENST00000556867 RBPMSQ93062 196 aaKnown RBP17.47■□□□□ 0.39
TDP1-216ENST00000556867 GALNT14Q96FL9 552 aa17.47■□□□□ 0.39
TDP1-216ENST00000556867 S4R3C0 116 aa17.47■□□□□ 0.39
TDP1-216ENST00000556867 A0A0G2JRQ6 117 aa17.46■□□□□ 0.39
TDP1-216ENST00000556867 PPP5D1E7EU14 171 aa17.46■□□□□ 0.39
TDP1-216ENST00000556867 IGHV3-23P01764 117 aa17.46■□□□□ 0.39
TDP1-216ENST00000556867 MFAP2P55001 183 aa17.46■□□□□ 0.39
TDP1-216ENST00000556867 CLEC19AQ6UXS0 136 aa17.46■□□□□ 0.39
TDP1-216ENST00000556867 IL34Q6ZMJ4 242 aa17.46■□□□□ 0.39
TDP1-216ENST00000556867 OR2C3Q8N628 320 aa17.46■□□□□ 0.39
TDP1-216ENST00000556867 OR1L6Q8NGR2 347 aa17.46■□□□□ 0.39
TDP1-216ENST00000556867 RNASE11Q8TAA1 199 aaKnown RBP17.46■□□□□ 0.39
TDP1-216ENST00000556867 VN1R17PQ8TDU5 208 aa17.46■□□□□ 0.39
TDP1-216ENST00000556867 ZNF256Q9Y2P7 627 aaPredicted RBP17.46■□□□□ 0.39
TDP1-216ENST00000556867 GGCTO75223 188 aaKnown RBP17.45■□□□□ 0.38
TDP1-216ENST00000556867 BAK1Q16611 211 aa17.45■□□□□ 0.38
TDP1-216ENST00000556867 ZNF57Q68EA5 555 aaPredicted RBP17.45■□□□□ 0.38
TDP1-216ENST00000556867 SLC25A24Q6NUK1 477 aa17.45■□□□□ 0.38
TDP1-216ENST00000556867 SELENOHQ8IZQ5 122 aaKnown RBP17.45■□□□□ 0.38
TDP1-216ENST00000556867 ZNF114Q8NC26 417 aa17.45■□□□□ 0.38
TDP1-216ENST00000556867 OR1P1Q8NH06 330 aa17.45■□□□□ 0.38
TDP1-216ENST00000556867 ZNF502Q8TBZ5 544 aa17.45■□□□□ 0.38
TDP1-216ENST00000556867 PLEKHA3Q9HB20 300 aa17.45■□□□□ 0.38
TDP1-216ENST00000556867 KCNIP3Q9Y2W7 256 aa17.45■□□□□ 0.38
TDP1-216ENST00000556867 TMEM56-RWDD3S4R434 201 aa17.45■□□□□ 0.38
TDP1-216ENST00000556867 ST8SIA3O43173 380 aa17.44■□□□□ 0.38
TDP1-216ENST00000556867 ARL3P36405 182 aa17.44■□□□□ 0.38
TDP1-216ENST00000556867 TMEM187Q14656 261 aa17.44■□□□□ 0.38
TDP1-216ENST00000556867 TMEM268Q5VZI3 342 aa17.44■□□□□ 0.38
TDP1-216ENST00000556867 TRIQKQ629K1 86 aa17.44■□□□□ 0.38
TDP1-216ENST00000556867 IL22RA2Q969J5 263 aa17.44■□□□□ 0.38
TDP1-216ENST00000556867 PRR25Q96S07 402 aa17.44■□□□□ 0.38
TDP1-216ENST00000556867 SDHCQ99643 169 aaPredicted RBP17.44■□□□□ 0.38
TDP1-216ENST00000556867 SLC25A21Q9BQT8 299 aaPredicted RBP17.44■□□□□ 0.38
TDP1-216ENST00000556867 SIGLEC8Q9NYZ4 499 aa17.44■□□□□ 0.38
TDP1-216ENST00000556867 INS-IGF2F8WCM5 200 aa17.43■□□□□ 0.38
TDP1-216ENST00000556867 IGLV1-51P01701 117 aa17.43■□□□□ 0.38
TDP1-216ENST00000556867 AKR1C4P17516 323 aa17.43■□□□□ 0.38
TDP1-216ENST00000556867 SUPT4H1P63272 117 aaKnown RBP17.43■□□□□ 0.38
TDP1-216ENST00000556867 DCTN2Q13561 401 aaKnown RBP17.43■□□□□ 0.38
TDP1-216ENST00000556867 AARDQ4LEZ3 155 aa17.43■□□□□ 0.38
TDP1-216ENST00000556867 PEMTQ9UBM1 199 aa17.43■□□□□ 0.38
TDP1-216ENST00000556867 IFNA17P01571 189 aa17.42■□□□□ 0.38
TDP1-216ENST00000556867 HLA-AP01891 365 aaKnown RBP17.42■□□□□ 0.38
TDP1-216ENST00000556867 CLEC3BP05452 202 aa17.42■□□□□ 0.38
TDP1-216ENST00000556867 CSN3P07498 182 aa17.42■□□□□ 0.38
TDP1-216ENST00000556867 INPP1P49441 399 aa17.42■□□□□ 0.38
TDP1-216ENST00000556867 Q6ZRM9 215 aa17.42■□□□□ 0.38
TDP1-216ENST00000556867 GPHB5Q86YW7 130 aa17.42■□□□□ 0.38
TDP1-216ENST00000556867 SLC35G3Q8N808 338 aa17.42■□□□□ 0.38
TDP1-216ENST00000556867 ATP6V0BQ99437 205 aa17.42■□□□□ 0.38
TDP1-216ENST00000556867 PDCD10Q9BUL8 212 aa17.42■□□□□ 0.38
TDP1-216ENST00000556867 K7EIM0 57 aa17.41■□□□□ 0.38
TDP1-216ENST00000556867 OR2C1O95371 312 aa17.41■□□□□ 0.38
TDP1-216ENST00000556867 SPNP16150 400 aa17.41■□□□□ 0.38
TDP1-216ENST00000556867 GPR183P32249 361 aa17.41■□□□□ 0.38
TDP1-216ENST00000556867 ERHP84090 104 aaKnown RBP17.41■□□□□ 0.38
TDP1-216ENST00000556867 SPINK9Q5DT21 86 aa17.41■□□□□ 0.38
TDP1-216ENST00000556867 TMED4Q7Z7H5 227 aa17.41■□□□□ 0.38
TDP1-216ENST00000556867 NAP1L6A6NFF2 107 aa17.4■□□□□ 0.38
TDP1-216ENST00000556867 LGALS9O00182 355 aa17.4■□□□□ 0.38
TDP1-216ENST00000556867 LY86O95711 162 aa17.4■□□□□ 0.38
TDP1-216ENST00000556867 ANXA3P12429 323 aa17.4■□□□□ 0.38
TDP1-216ENST00000556867 SRPXP78539 464 aa17.4■□□□□ 0.38
TDP1-216ENST00000556867 DEFB121Q5J5C9 76 aa17.4■□□□□ 0.38
TDP1-216ENST00000556867 HAPLN4Q86UW8 402 aa17.4■□□□□ 0.38
TDP1-216ENST00000556867 GPR146Q96CH1 333 aa17.4■□□□□ 0.38
TDP1-216ENST00000556867 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.4■□□□□ 0.38
TDP1-216ENST00000556867 PRR13Q9NZ81 148 aa17.4■□□□□ 0.38
TDP1-216ENST00000556867 CACNG5Q9UF02 275 aa17.4■□□□□ 0.38
TDP1-216ENST00000556867 A6NHS1 94 aa17.39■□□□□ 0.37
TDP1-216ENST00000556867 RBMS2Q15434 407 aaKnown RBP17.39■□□□□ 0.37
TDP1-216ENST00000556867 TMEM128Q5BJH2 165 aa17.39■□□□□ 0.37
TDP1-216ENST00000556867 OR52E5Q8NH55 327 aa17.39■□□□□ 0.37
TDP1-216ENST00000556867 SCARB1Q8WTV0 552 aa17.39■□□□□ 0.37
TDP1-216ENST00000556867 C21orf62Q9NYP8 219 aa17.39■□□□□ 0.37
TDP1-216ENST00000556867 LSM4Q9Y4Z0 139 aaKnown RBP17.39■□□□□ 0.37
TDP1-216ENST00000556867 A0A0B4J2A0 478 aa17.38■□□□□ 0.37
TDP1-216ENST00000556867 TGOLN2O43493 480 aa17.38■□□□□ 0.37
TDP1-216ENST00000556867 IL7P13232 177 aa17.38■□□□□ 0.37
TDP1-216ENST00000556867 HOXA1P49639 335 aaPredicted RBP17.38■□□□□ 0.37
TDP1-216ENST00000556867 SPCS3P61009 180 aa17.38■□□□□ 0.37
TDP1-216ENST00000556867 FAM106AQ4KMX7 169 aa17.38■□□□□ 0.37
TDP1-216ENST00000556867 LGI3Q8N145 548 aa17.38■□□□□ 0.37
TDP1-216ENST00000556867 MISP3Q96FF7 219 aa17.38■□□□□ 0.37
TDP1-216ENST00000556867 SHPKQ9UHJ6 478 aa17.38■□□□□ 0.37
TDP1-216ENST00000556867 IGHV3-21A0A0B4J1V1 117 aa17.37■□□□□ 0.37
TDP1-216ENST00000556867 A8MWP6 167 aa17.37■□□□□ 0.37
TDP1-216ENST00000556867 F8W735 103 aaPredicted RBP17.37■□□□□ 0.37
TDP1-216ENST00000556867 I3L2K1 104 aa17.37■□□□□ 0.37
TDP1-216ENST00000556867 GP9P14770 177 aa17.37■□□□□ 0.37
TDP1-216ENST00000556867 SNCAP37840 140 aa17.37■□□□□ 0.37
TDP1-216ENST00000556867 NMSQ5H8A3 153 aa17.37■□□□□ 0.37
TDP1-216ENST00000556867 PLET1Q6UQ28 207 aa17.37■□□□□ 0.37
TDP1-216ENST00000556867 LINC00299Q6ZSB3 139 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms