RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 PPP5D1E7EU14 171 aa13.12□□□□□ -0.31
PSEN1-217ENST00000556533 SAP30O75446 220 aa13.12□□□□□ -0.31
PSEN1-217ENST00000556533 VAMP1P23763 118 aa13.12□□□□□ -0.31
PSEN1-217ENST00000556533 SYNJ2BPP57105 145 aa13.12□□□□□ -0.31
PSEN1-217ENST00000556533 SUPT4H1P63272 117 aaKnown RBP13.12□□□□□ -0.31
PSEN1-217ENST00000556533 PRCDQ00LT1 54 aa13.12□□□□□ -0.31
PSEN1-217ENST00000556533 CLEC19AQ6UXS0 136 aa13.12□□□□□ -0.31
PSEN1-217ENST00000556533 Q6ZRM9 215 aa13.12□□□□□ -0.31
PSEN1-217ENST00000556533 SLC35G3Q8N808 338 aa13.12□□□□□ -0.31
PSEN1-217ENST00000556533 GPR146Q96CH1 333 aa13.12□□□□□ -0.31
PSEN1-217ENST00000556533 GALNT14Q96FL9 552 aa13.12□□□□□ -0.31
PSEN1-217ENST00000556533 PLEKHA3Q9HB20 300 aa13.12□□□□□ -0.31
PSEN1-217ENST00000556533 THYN1Q9P016 225 aa13.12□□□□□ -0.31
PSEN1-217ENST00000556533 F11RQ9Y624 299 aaKnown RBP13.12□□□□□ -0.31
PSEN1-217ENST00000556533 TMEM56-RWDD3S4R434 201 aa13.12□□□□□ -0.31
PSEN1-217ENST00000556533 NOTCH3Q9UM47 2321 aa13.12□□□□□ -0.31
PSEN1-217ENST00000556533 IGHV3-21A0A0B4J1V1 117 aa13.11□□□□□ -0.31
PSEN1-217ENST00000556533 MFSD2BA6NFX1 497 aa13.11□□□□□ -0.31
PSEN1-217ENST00000556533 BMPR1BO00238 502 aa13.11□□□□□ -0.31
PSEN1-217ENST00000556533 HLA-AP01891 365 aaKnown RBP13.11□□□□□ -0.31
PSEN1-217ENST00000556533 ERHP84090 104 aaKnown RBP13.11□□□□□ -0.31
PSEN1-217ENST00000556533 KLF5Q13887 457 aaPredicted RBP13.11□□□□□ -0.31
PSEN1-217ENST00000556533 TATDN3Q17R31 274 aa13.11□□□□□ -0.31
PSEN1-217ENST00000556533 ZNF429Q86V71 674 aa13.11□□□□□ -0.31
PSEN1-217ENST00000556533 FAM219AQ8IW50 185 aa13.11□□□□□ -0.31
PSEN1-217ENST00000556533 CXorf58Q96LI9 332 aa13.11□□□□□ -0.31
PSEN1-217ENST00000556533 ELOVL1Q9BW60 279 aa13.11□□□□□ -0.31
PSEN1-217ENST00000556533 ZC4H2Q9NQZ6 224 aa13.11□□□□□ -0.31
PSEN1-217ENST00000556533 BATF3Q9NR55 127 aa13.11□□□□□ -0.31
PSEN1-217ENST00000556533 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.11□□□□□ -0.31
PSEN1-217ENST00000556533 AURKAIP1Q9NWT8 199 aaPredicted RBP13.11□□□□□ -0.31
PSEN1-217ENST00000556533 CACNG5Q9UF02 275 aa13.11□□□□□ -0.31
PSEN1-217ENST00000556533 OR2C1O95371 312 aa13.1□□□□□ -0.31
PSEN1-217ENST00000556533 CLEC3BP05452 202 aa13.1□□□□□ -0.31
PSEN1-217ENST00000556533 MFAP2P55001 183 aa13.1□□□□□ -0.31
PSEN1-217ENST00000556533 RBMS2Q15434 407 aaKnown RBP13.1□□□□□ -0.31
PSEN1-217ENST00000556533 KLK9Q2XQG4 91 aa13.1□□□□□ -0.31
PSEN1-217ENST00000556533 PDLIM3Q53GG5 364 aaPredicted RBP13.1□□□□□ -0.31
PSEN1-217ENST00000556533 TMEM128Q5BJH2 165 aa13.1□□□□□ -0.31
PSEN1-217ENST00000556533 LYZL2Q7Z4W2 148 aa13.1□□□□□ -0.31
PSEN1-217ENST00000556533 LGI3Q8N145 548 aa13.1□□□□□ -0.31
PSEN1-217ENST00000556533 CENPSQ8N2Z9 138 aa13.1□□□□□ -0.31
PSEN1-217ENST00000556533 OR2C3Q8N628 320 aa13.1□□□□□ -0.31
PSEN1-217ENST00000556533 MISP3Q96FF7 219 aa13.1□□□□□ -0.31
PSEN1-217ENST00000556533 OR4C12Q96R67 309 aa13.1□□□□□ -0.31
PSEN1-217ENST00000556533 ENY2Q9NPA8 101 aa13.1□□□□□ -0.31
PSEN1-217ENST00000556533 KLK9Q9UKQ9 250 aa13.1□□□□□ -0.31
PSEN1-217ENST00000556533 TRBV7-1A0A0A6YYK4 115 aa13.09□□□□□ -0.31
PSEN1-217ENST00000556533 WIPF1O43516 503 aa13.09□□□□□ -0.31
PSEN1-217ENST00000556533 NXPH3O95157 252 aa13.09□□□□□ -0.31
PSEN1-217ENST00000556533 ARL3P36405 182 aa13.09□□□□□ -0.31
PSEN1-217ENST00000556533 SNCAP37840 140 aa13.09□□□□□ -0.31
PSEN1-217ENST00000556533 HOXA1P49639 335 aaPredicted RBP13.09□□□□□ -0.31
PSEN1-217ENST00000556533 SRPXP78539 464 aa13.09□□□□□ -0.31
PSEN1-217ENST00000556533 EGFEM1PQ0D2K5 195 aa13.09□□□□□ -0.31
PSEN1-217ENST00000556533 ACSM6Q6P461 480 aa13.09□□□□□ -0.31
PSEN1-217ENST00000556533 REC114Q7Z4M0 266 aa13.09□□□□□ -0.31
PSEN1-217ENST00000556533 OR1L6Q8NGR2 347 aa13.09□□□□□ -0.31
PSEN1-217ENST00000556533 S100ZQ8WXG8 99 aa13.09□□□□□ -0.31
PSEN1-217ENST00000556533 IL22RA2Q969J5 263 aa13.09□□□□□ -0.31
PSEN1-217ENST00000556533 CCDC140Q96MF4 163 aa13.09□□□□□ -0.31
PSEN1-217ENST00000556533 C7orf50Q9BRJ6 194 aaKnown RBP13.09□□□□□ -0.31
PSEN1-217ENST00000556533 PTTG2Q9NZH5 202 aa13.09□□□□□ -0.31
PSEN1-217ENST00000556533 FLVCR2Q9UPI3 526 aa13.09□□□□□ -0.31
PSEN1-217ENST00000556533 GGCTO75223 188 aaKnown RBP13.08□□□□□ -0.32
PSEN1-217ENST00000556533 NDUFB6O95139 128 aa13.08□□□□□ -0.32
PSEN1-217ENST00000556533 PPP1R1AQ13522 171 aa13.08□□□□□ -0.32
PSEN1-217ENST00000556533 FAM209BQ5JX69 171 aa13.08□□□□□ -0.32
PSEN1-217ENST00000556533 LINC00299Q6ZSB3 139 aa13.08□□□□□ -0.32
PSEN1-217ENST00000556533 OR1P1Q8NH06 330 aa13.08□□□□□ -0.32
PSEN1-217ENST00000556533 ZMAT5Q9UDW3 170 aaKnown RBP13.08□□□□□ -0.32
PSEN1-217ENST00000556533 A0A0B4J2A0 478 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 WI2-2373I1.2A0A1W2PRP0 233 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 PLA2G10O15496 165 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 LY86O95711 162 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 SULT1A3P0DMM9 295 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 SULT1A4P0DMN0 295 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 GPR183P32249 361 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 INSL3P51460 131 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 SPCS3P61009 180 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 ANKRD55Q3KP44 614 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 HAPLN4Q86UW8 402 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 UBAC2Q8NBM4 344 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 OR9G4Q8NGQ1 327 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 ZNF502Q8TBZ5 544 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 MRAPQ8TCY5 172 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 VN1R17PQ8TDU5 208 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 PINX1Q96BK5 328 aaKnown RBP13.07□□□□□ -0.32
PSEN1-217ENST00000556533 SHPKQ9UHJ6 478 aa13.07□□□□□ -0.32
PSEN1-217ENST00000556533 ZNF320A2RRD8 509 aa13.06□□□□□ -0.32
PSEN1-217ENST00000556533 CEBPZOSA8MTT3 80 aa13.06□□□□□ -0.32
PSEN1-217ENST00000556533 LYRM1O43325 122 aa13.06□□□□□ -0.32
PSEN1-217ENST00000556533 SFT2D2O95562 160 aa13.06□□□□□ -0.32
PSEN1-217ENST00000556533 BTCP35070 178 aa13.06□□□□□ -0.32
PSEN1-217ENST00000556533 DEFB121Q5J5C9 76 aa13.06□□□□□ -0.32
PSEN1-217ENST00000556533 SCARB1Q8WTV0 552 aa13.06□□□□□ -0.32
PSEN1-217ENST00000556533 CCDC32Q9BV29 185 aa13.06□□□□□ -0.32
PSEN1-217ENST00000556533 HEYLQ9NQ87 328 aaPredicted RBP13.06□□□□□ -0.32
PSEN1-217ENST00000556533 C21orf62Q9NYP8 219 aa13.06□□□□□ -0.32
PSEN1-217ENST00000556533 IGHV3-35A0A0C4DH35 117 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms