RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 ANXA2RQ3ZCQ2 193 aa7.44□□□□□ -1.22
SCFD1-220ENST00000556486 FAM106AQ4KMX7 169 aa7.44□□□□□ -1.22
SCFD1-220ENST00000556486 ZNF57Q68EA5 555 aaPredicted RBP7.44□□□□□ -1.22
SCFD1-220ENST00000556486 LYG2Q86SG7 212 aa7.44□□□□□ -1.22
SCFD1-220ENST00000556486 VKORC1L1Q8N0U8 176 aa7.44□□□□□ -1.22
SCFD1-220ENST00000556486 OR4A5Q8NH83 315 aa7.44□□□□□ -1.22
SCFD1-220ENST00000556486 CXorf58Q96LI9 332 aa7.44□□□□□ -1.22
SCFD1-220ENST00000556486 ATG5Q9H1Y0 275 aa7.44□□□□□ -1.22
SCFD1-220ENST00000556486 MLXQ9UH92 298 aa7.44□□□□□ -1.22
SCFD1-220ENST00000556486 DPPA5A6NC42 116 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 CGB1A6NKQ9 187 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 SSX5O60225 188 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 NDUFB8O95169 186 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 HOXB5P09067 269 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 AREGP15514 252 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 HLA-GP17693 338 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 HSPA13P48723 471 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 KRTAP19-4Q3LI73 84 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 OR2B11Q5JQS5 317 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 UBE2UQ5VVX9 321 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 TMEM268Q5VZI3 342 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 C22orf42Q6IC83 251 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 CLEC19AQ6UXS0 136 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 C19orf35Q6ZS72 473 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 TPRA1Q86W33 373 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 UXS1Q8NBZ7 420 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 NUDCD2Q8WVJ2 157 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 TCTEX1D2Q8WW35 142 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 CACNG8Q8WXS5 425 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 EEF1AKMT3Q96AZ1 226 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 ATP6V0BQ99437 205 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 GGTLC1Q9BX51 225 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 TP53TG1Q9Y2A0 90 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 KLK5Q9Y337 293 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-220ENST00000556486 MUC4Q99102 2169 aa7.43□□□□□ -1.22
SCFD1-220ENST00000556486 IGLC7A0M8Q6 106 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 TMEM235A6NFC5 223 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 CBY3A6NI87 242 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 TAS2R31P59538 309 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 OR2B8PP59922 312 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 GABARAPL2P60520 117 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 TNFRSF9Q07011 255 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 DEFB135Q30KP9 77 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 TIMM50Q3ZCQ8 353 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 CADM3Q8N126 398 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 TMEM217Q8N7C4 229 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 OR52B4Q8NGK2 314 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 ZNF502Q8TBZ5 544 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 TMEM170AQ8WVE7 144 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 VCX3BQ9H321 246 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 TAS2R8Q9NYW2 309 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 MRPL27Q9P0M9 148 aaKnown RBP7.42□□□□□ -1.22
SCFD1-220ENST00000556486 SPATA2Q9UM82 520 aa7.42□□□□□ -1.22
SCFD1-220ENST00000556486 FAT2Q9NYQ8 4349 aa7.41□□□□□ -1.22
SCFD1-220ENST00000556486 DNAH2Q9P225 4427 aa7.41□□□□□ -1.22
SCFD1-220ENST00000556486 LOC102724200A0A096LPH7 203 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-220ENST00000556486 A0A0A6YYH2 397 aa7.41□□□□□ -1.22
SCFD1-220ENST00000556486 MFSD2BA6NFX1 497 aa7.41□□□□□ -1.22
SCFD1-220ENST00000556486 A6NJ64 397 aa7.41□□□□□ -1.22
SCFD1-220ENST00000556486 J3QRK9 145 aa7.41□□□□□ -1.22
SCFD1-220ENST00000556486 PTBP1P26599 531 aaKnown RBP eCLIP7.41□□□□□ -1.22
SCFD1-220ENST00000556486 GNG2P59768 71 aa7.41□□□□□ -1.22
SCFD1-220ENST00000556486 ICAM4Q14773 271 aa7.41□□□□□ -1.22
SCFD1-220ENST00000556486 LGALS9CQ6DKI2 356 aa7.41□□□□□ -1.22
SCFD1-220ENST00000556486 THOC7Q6I9Y2 204 aaKnown RBP7.41□□□□□ -1.22
SCFD1-220ENST00000556486 UNQ9165/PRO28630Q6UXU0 137 aa7.41□□□□□ -1.22
SCFD1-220ENST00000556486 HSD17B13Q7Z5P4 300 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-220ENST00000556486 PHLDA1Q8WV24 401 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-220ENST00000556486 SPAG8Q99932 426 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-220ENST00000556486 ZNF436Q9C0F3 470 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-220ENST00000556486 HRH4Q9H3N8 390 aa7.41□□□□□ -1.22
SCFD1-220ENST00000556486 C5orf66Q9H5L9 145 aa7.41□□□□□ -1.22
SCFD1-220ENST00000556486 TXNL4BQ9NX01 149 aaKnown RBP7.41□□□□□ -1.22
SCFD1-220ENST00000556486 RHBDL2Q9NX52 303 aa7.41□□□□□ -1.22
SCFD1-220ENST00000556486 THYN1Q9P016 225 aa7.41□□□□□ -1.22
SCFD1-220ENST00000556486 DYNC1H1Q14204 4646 aaKnown RBP7.4□□□□□ -1.22
SCFD1-220ENST00000556486 KIR2DL5BA0A0G2JN68 375 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 KIR2DL5BA0A0G2JPC4 375 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 ZNF320A2RRD8 509 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 HPRT1P00492 218 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 PPYP01298 95 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 DEFA4P12838 97 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 MYOD1P15172 320 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 NQO2P16083 231 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 SFXN4Q6P4A7 337 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 ZNF773Q6PK81 442 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 BTNL8Q6UX41 500 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 HOGA1Q86XE5 327 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 SPAG16Q8N0X2 631 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 KIR2DL5AQ8N109 375 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 BEST4Q8NFU0 473 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 OR13F1Q8NGS4 319 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 KIR2DL5BQ8NHK3 375 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 LGALS14Q8TCE9 139 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 CD300LFQ8TDQ1 290 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 VN1R17PQ8TDU5 208 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 TMEM190Q8WZ59 177 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 FCGR1BQ92637 280 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 DAPK2Q9UIK4 370 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 UFC1Q9Y3C8 167 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms