RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 FLNAP21333 2647 aaKnown RBP8.6□□□□□ -1.03
LINC01550-206ENST00000556462 IFNA4P05014 189 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 FBP1P09467 338 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 SEC11BP0C7V7 166 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 OR13C7P0DN81 318 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 ATP5IP56385 69 aaPredicted RBP8.6□□□□□ -1.03
LINC01550-206ENST00000556462 RAB11AP62491 216 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 VWC2Q2TAL6 325 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 TUSC1Q2TAM9 212 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 CLLU1Q5K131 121 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 ZNF562Q6V9R5 426 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 SSX3Q99909 188 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 TLN2Q9Y4G6 2542 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 SCAF4O95104 1147 aaKnown RBP8.6□□□□□ -1.03
LINC01550-206ENST00000556462 NMBP08949 121 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 AREGP15514 252 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 MDKP21741 143 aaPredicted RBP8.6□□□□□ -1.03
LINC01550-206ENST00000556462 ATP6V0CP27449 155 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 SNCAP37840 140 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 CX3CL1P78423 397 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 LRRC75BQ2VPJ9 315 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 BCL6BQ8N143 479 aaPredicted RBP8.6□□□□□ -1.03
LINC01550-206ENST00000556462 P2RX4Q99571 388 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 WDR61Q9GZS3 305 aaKnown RBP8.6□□□□□ -1.03
LINC01550-206ENST00000556462 SLC25A32Q9H2D1 315 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 C1RLQ9NZP8 487 aa8.6□□□□□ -1.03
LINC01550-206ENST00000556462 SMAD7O15105 426 aaKnown RBP8.59□□□□□ -1.03
LINC01550-206ENST00000556462 CNIH1O95406 144 aa8.59□□□□□ -1.03
LINC01550-206ENST00000556462 IFNA5P01569 189 aa8.59□□□□□ -1.03
LINC01550-206ENST00000556462 REG1AP05451 166 aa8.59□□□□□ -1.03
LINC01550-206ENST00000556462 APELAP0DMC3 54 aa8.59□□□□□ -1.03
LINC01550-206ENST00000556462 RUNX1Q01196 453 aa8.59□□□□□ -1.03
LINC01550-206ENST00000556462 FXYD3Q14802 87 aa8.59□□□□□ -1.03
LINC01550-206ENST00000556462 EIF5AL1Q6IS14 154 aaKnown RBP8.59□□□□□ -1.03
LINC01550-206ENST00000556462 NANPQ8TBE9 248 aa8.59□□□□□ -1.03
LINC01550-206ENST00000556462 TMEM147Q9BVK8 224 aa8.59□□□□□ -1.03
LINC01550-206ENST00000556462 GGACTQ9BVM4 153 aa8.59□□□□□ -1.03
LINC01550-206ENST00000556462 PARD6GQ9BYG4 376 aaPredicted RBP8.59□□□□□ -1.03
LINC01550-206ENST00000556462 UQCC1Q9NVA1 299 aa8.59□□□□□ -1.03
LINC01550-206ENST00000556462 NDPQ00604 133 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 ARSJQ5FYB0 599 aaPredicted RBP8.58□□□□□ -1.04
LINC01550-206ENST00000556462 PVRIGQ6DKI7 326 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 TMEM219Q86XT9 240 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 SSMEM1Q8WWF3 244 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 C22orf15Q8WYQ4 148 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 TAF15Q92804 592 aaKnown RBP eCLIP8.58□□□□□ -1.04
LINC01550-206ENST00000556462 RBM14Q96PK6 669 aaKnown RBP8.58□□□□□ -1.04
LINC01550-206ENST00000556462 SRSF8Q9BRL6 282 aaKnown RBP8.58□□□□□ -1.04
LINC01550-206ENST00000556462 MYO9AB2RTY4 2548 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 ACANP16112 2415 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 IGHV7-81A0A0B4J1V7 117 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 UBE2L5PA0A1B0GUS4 154 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 MDFIC2A0A1B0GVS7 189 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 FGF16O43320 207 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 HLA-DRB1P01911 266 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 SULT1A2P50226 295 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 MFAP2P55001 183 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 RAB14P61106 215 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 DLK1P80370 383 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 KRTAP1-1Q07627 177 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 AANATQ16613 207 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 MLANAQ16655 118 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 DEFB112Q30KQ8 113 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 SMUG1Q53HV7 270 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 C9orf139Q6ZV77 190 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 HSD17B13Q7Z5P4 300 aaPredicted RBP8.58□□□□□ -1.04
LINC01550-206ENST00000556462 C5orf56Q8N8D9 126 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 ZNF114Q8NC26 417 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 RNF141Q8WVD5 230 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 GNPNAT1Q96EK6 184 aaPredicted RBP8.58□□□□□ -1.04
LINC01550-206ENST00000556462 FAM103A1Q9BTL3 118 aaKnown RBP8.58□□□□□ -1.04
LINC01550-206ENST00000556462 RSG1Q9BU20 258 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 MXRA5Q9NR99 2828 aa8.58□□□□□ -1.04
LINC01550-206ENST00000556462 H3BUX3 64 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 AMY1AP04745 511 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 EGR2P11161 476 aaPredicted RBP8.57□□□□□ -1.04
LINC01550-206ENST00000556462 SLC25A24Q6NUK1 477 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 TREML4Q6UXN2 200 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 C19orf35Q6ZS72 473 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 SCGB1C1Q8TD33 95 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 RASL11BQ9BPW5 248 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 HSPB9Q9BQS6 159 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 SLC25A33Q9BSK2 321 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 FBXO7Q9Y3I1 522 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 A6NDX4 124 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 SUB1P53999 127 aaKnown RBP eCLIP8.57□□□□□ -1.04
LINC01550-206ENST00000556462 ASPHD1Q5U4P2 390 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 CENPVQ7Z7K6 275 aaPredicted RBP8.57□□□□□ -1.04
LINC01550-206ENST00000556462 MRPL41Q8IXM3 137 aaKnown RBP8.57□□□□□ -1.04
LINC01550-206ENST00000556462 OR2G3Q8NGZ4 309 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 ARPC1AQ92747 370 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 FNDC4Q9H6D8 234 aaPredicted RBP8.57□□□□□ -1.04
LINC01550-206ENST00000556462 NPVFQ9HCQ7 196 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 WDR83OSQ9Y284 106 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 DMRT1Q9Y5R6 373 aa8.57□□□□□ -1.04
LINC01550-206ENST00000556462 FNDC10F2Z333 226 aa8.56□□□□□ -1.04
LINC01550-206ENST00000556462 CTRB1P17538 263 aa8.56□□□□□ -1.04
LINC01550-206ENST00000556462 CD69Q07108 199 aa8.56□□□□□ -1.04
LINC01550-206ENST00000556462 LY6EQ16553 131 aa8.56□□□□□ -1.04
LINC01550-206ENST00000556462 CTRB2Q6GPI1 263 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms